RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 PSTPIP2Q9H939 334 aa12.03□□□□□ -0.48
LINC00649-202ENST00000400353 KDM3AQ9Y4C1 1321 aa12.03□□□□□ -0.48
LINC00649-202ENST00000400353 MYH4Q9Y623 1939 aa12.03□□□□□ -0.48
LINC00649-202ENST00000400353 FGFR1OPO95684 399 aaKnown RBP12.02□□□□□ -0.48
LINC00649-202ENST00000400353 GYPCP04921 128 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 DNM2P50570 870 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 UBXN1Q04323 297 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 PSMD2Q13200 908 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 GRB10Q13322 594 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 AP3B2Q13367 1082 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 R3HDM1Q15032 1099 aaKnown RBP12.02□□□□□ -0.48
LINC00649-202ENST00000400353 TMEM119Q4V9L6 283 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 SLFN13Q68D06 897 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 TTBK2Q6IQ55 1244 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 FOXR2Q6PJQ5 311 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 MOXD1Q6UVY6 613 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 CYP26C1Q6V0L0 522 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 TOGARAM2Q6ZUX3 1019 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 UNC13DQ70J99 1090 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 MB21D1Q8N884 522 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 ZNF397Q8NF99 534 aaPredicted RBP12.02□□□□□ -0.48
LINC00649-202ENST00000400353 NUP58Q9BVL2 599 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 FAM198AQ9UFP1 575 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.48
LINC00649-202ENST00000400353 ZNF646O15015 1829 aaPredicted RBP12.02□□□□□ -0.48
LINC00649-202ENST00000400353 ATRNL1Q5VV63 1379 aa12.02□□□□□ -0.48
LINC00649-202ENST00000400353 SIPA1L1O43166 1804 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 USP17L10C9JJH3 530 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 EEF2P13639 858 aaKnown RBP12.02□□□□□ -0.49
LINC00649-202ENST00000400353 SLC1A4P43007 532 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 USP11P51784 963 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 TUBB2AQ13885 445 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 CLEC10AQ8IUN9 316 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 ZSCAN29Q8IWY8 852 aaPredicted RBP12.02□□□□□ -0.49
LINC00649-202ENST00000400353 GMCL1P1Q8NEA9 526 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 LARP4BQ92615 738 aaKnown RBP12.02□□□□□ -0.49
LINC00649-202ENST00000400353 RAD54LQ92698 747 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 PNMA5Q96PV4 448 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 NUP88Q99567 741 aaPredicted RBP12.02□□□□□ -0.49
LINC00649-202ENST00000400353 FEZ1Q99689 392 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 TUBB2BQ9BVA1 445 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 NT5C3AQ9H0P0 336 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 DNAJC18Q9H819 358 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 DDX25Q9UHL0 483 aaKnown RBP12.02□□□□□ -0.49
LINC00649-202ENST00000400353 ADGRG1Q9Y653 693 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 STK24Q9Y6E0 443 aa12.02□□□□□ -0.49
LINC00649-202ENST00000400353 SLC37A4O43826 429 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 MARCH6O60337 910 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 PPP1R11O60927 126 aaPredicted RBP12.01□□□□□ -0.49
LINC00649-202ENST00000400353 TDP2O95551 362 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 GNG11P61952 73 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 ICA1Q05084 483 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 TRAF1Q13077 416 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 KCTD1Q719H9 257 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 IRF2BP1Q8IU81 584 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 EGFL6Q8IUX8 553 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 CSGALNACT2Q8N6G5 542 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 RETREG2Q8NC44 543 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 SNX29Q8TEQ0 813 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 CPLX3Q8WVH0 158 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 GMCL1Q96IK5 515 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 ABHD10Q9NUJ1 306 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 BLOC1S4Q9NUP1 217 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 GEMIN8Q9NWZ8 242 aaKnown RBP12.01□□□□□ -0.49
LINC00649-202ENST00000400353 MAPK8IP1Q9UQF2 711 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 ABCB11O95342 1321 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 TRIM49BA6NDI0 452 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 DDTLA6NHG4 134 aaPredicted RBP12.01□□□□□ -0.49
LINC00649-202ENST00000400353 SOWAHDA6NJG2 315 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 ZBTB7AO95365 584 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 ZSCAN20P17040 1043 aaPredicted RBP12.01□□□□□ -0.49
LINC00649-202ENST00000400353 FXR1P51114 621 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC00649-202ENST00000400353 UBE2SQ16763 222 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 ABCB5Q2M3G0 1257 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 TSR1Q2NL82 804 aaKnown RBP12.01□□□□□ -0.49
LINC00649-202ENST00000400353 QRICH1Q2TAL8 776 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 HYIQ5T013 277 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 RAD9BQ6WBX8 426 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 ZFPM1Q8IX07 1006 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 MNS1Q8NEH6 495 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 ZNF507Q8TCN5 953 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 LRRC15Q8TF66 581 aa12.01□□□□□ -0.49
LINC00649-202ENST00000400353 DUSP9Q99956 384 aaKnown RBP12.01□□□□□ -0.49
LINC00649-202ENST00000400353 CYP3A7-CYP3A51PA0A087WV96 503 aa12□□□□□ -0.49
LINC00649-202ENST00000400353 MAFGO15525 162 aa12□□□□□ -0.49
LINC00649-202ENST00000400353 EDIL3O43854 480 aa12□□□□□ -0.49
LINC00649-202ENST00000400353 KIF5CO60282 957 aa12□□□□□ -0.49
LINC00649-202ENST00000400353 URI1O94763 535 aaPredicted RBP12□□□□□ -0.49
LINC00649-202ENST00000400353 CYP3A7P24462 503 aa12□□□□□ -0.49
LINC00649-202ENST00000400353 TCP10Q12799 353 aa12□□□□□ -0.49
LINC00649-202ENST00000400353 CDC37Q16543 378 aaPredicted RBP12□□□□□ -0.49
LINC00649-202ENST00000400353 C7orf43Q8WVR3 580 aa12□□□□□ -0.49
LINC00649-202ENST00000400353 MBOAT7Q96N66 472 aa12□□□□□ -0.49
LINC00649-202ENST00000400353 TMOD2Q9NZR1 351 aa12□□□□□ -0.49
LINC00649-202ENST00000400353 MYO1AQ9UBC5 1043 aa12□□□□□ -0.49
LINC00649-202ENST00000400353 COBLO75128 1261 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 FOSP01100 380 aaPredicted RBP11.99□□□□□ -0.49
LINC00649-202ENST00000400353 KRT9P35527 623 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 SLC16A2P36021 539 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 PMS1P54277 932 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms