RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 SMARCA1P28370 1054 aa16.89■□□□□ 0.29
SMARCE1-204ENST00000400122 HSD17B4P51659 736 aa16.89■□□□□ 0.29
SMARCE1-204ENST00000400122 SART3Q15020 963 aaKnown RBP16.89■□□□□ 0.29
SMARCE1-204ENST00000400122 TMEM240Q5SV17 173 aa16.89■□□□□ 0.29
SMARCE1-204ENST00000400122 SLC17A8Q8NDX2 589 aa16.89■□□□□ 0.29
SMARCE1-204ENST00000400122 MTG1Q9BT17 334 aaPredicted RBP16.89■□□□□ 0.29
SMARCE1-204ENST00000400122 NOC4LQ9BVI4 516 aaKnown RBP16.89■□□□□ 0.29
SMARCE1-204ENST00000400122 ALDH8A1Q9H2A2 487 aaPredicted RBP16.89■□□□□ 0.29
SMARCE1-204ENST00000400122 MTIF3Q9H2K0 278 aaKnown RBP16.89■□□□□ 0.29
SMARCE1-204ENST00000400122 RIOX1Q9H6W3 641 aa16.89■□□□□ 0.29
SMARCE1-204ENST00000400122 IL23AQ9NPF7 189 aa16.89■□□□□ 0.29
SMARCE1-204ENST00000400122 EYSQ5T1H1 3165 aa16.89■□□□□ 0.29
SMARCE1-204ENST00000400122 KLRF2D3W0D1 207 aa16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 ZBTB5O15062 677 aa16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 EIF3JO75822 258 aaKnown RBP16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 STXBP2Q15833 593 aa16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 KCNV1Q6PIU1 500 aa16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 STOX1Q6ZVD7 989 aa16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 C16orf59Q7L2K0 433 aa16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 SESTD1Q86VW0 696 aa16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 RPUSD2Q8IZ73 545 aaKnown RBP16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 NCOA7Q8NI08 942 aa16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 HERVK_113Q902F9 699 aa16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.88■□□□□ 0.293e-7■■■□□ 15.4
SMARCE1-204ENST00000400122 HIPK3Q9H422 1215 aa16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 GPHNQ9NQX3 736 aaPredicted RBP16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 MAD2L2Q9UI95 211 aa16.88■□□□□ 0.29
SMARCE1-204ENST00000400122 ERICH2A1L162 156 aa16.87■□□□□ 0.29
SMARCE1-204ENST00000400122 PITPNM1O00562 1244 aa16.87■□□□□ 0.29
SMARCE1-204ENST00000400122 TXNP10599 105 aaKnown RBP16.87■□□□□ 0.29
SMARCE1-204ENST00000400122 TROAPQ12815 778 aa16.87■□□□□ 0.29
SMARCE1-204ENST00000400122 GRM4Q14833 912 aa16.87■□□□□ 0.29
SMARCE1-204ENST00000400122 USH1GQ495M9 461 aa16.87■□□□□ 0.29
SMARCE1-204ENST00000400122 OR6J1Q8NGC5 347 aa16.87■□□□□ 0.29
SMARCE1-204ENST00000400122 RMDN3Q96TC7 470 aa16.87■□□□□ 0.29
SMARCE1-204ENST00000400122 B4GALT4O60513 344 aa16.86■□□□□ 0.29
SMARCE1-204ENST00000400122 TGFB3P10600 412 aa16.86■□□□□ 0.29
SMARCE1-204ENST00000400122 CSF2RAP15509 400 aa16.86■□□□□ 0.29
SMARCE1-204ENST00000400122 RFC2P35250 354 aa16.86■□□□□ 0.29
SMARCE1-204ENST00000400122 TMEM63BQ5T3F8 832 aa16.86■□□□□ 0.29
SMARCE1-204ENST00000400122 CYB5R4Q7L1T6 521 aa16.86■□□□□ 0.29
SMARCE1-204ENST00000400122 RALYLQ86SE5 291 aaKnown RBP16.86■□□□□ 0.29
SMARCE1-204ENST00000400122 TMTC2Q8N394 836 aa16.86■□□□□ 0.29
SMARCE1-204ENST00000400122 TTYH1Q9H313 450 aaPredicted RBP16.86■□□□□ 0.29
SMARCE1-204ENST00000400122 CHD7Q9P2D1 2997 aa16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 E7EWF7 191 aa16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 OPLAHO14841 1288 aa16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 GH1P01241 217 aa16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 HOXD8P13378 290 aaPredicted RBP16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 PTH1RQ03431 593 aa16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 TEX2Q8IWB9 1127 aa16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 STAG2Q8N3U4 1231 aa16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 CDX2Q99626 313 aaPredicted RBP16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 CPVLQ9H3G5 476 aa16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 PXMP2Q9NR77 195 aa16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 MYH7BA7E2Y1 1941 aa16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 NCOR1O75376 2440 aa16.85■□□□□ 0.29
SMARCE1-204ENST00000400122 TTC28Q96AY4 2481 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 PNMA6FA0A0J9YX94 578 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 IFIT3O14879 490 aaKnown RBP16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 STAM2O75886 525 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 PARNO95453 639 aaKnown RBP16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 FGBP02675 491 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 NR3C2P08235 984 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 DNAJB2P25686 324 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 CYP2C18P33260 490 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 RBL2Q08999 1139 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 WTAPQ15007 396 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 ZNF365Q70YC5 407 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 MB21D2Q8IYB1 491 aaPredicted RBP16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 IGDCC4Q8TDY8 1250 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 TAAR1Q96RJ0 339 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 TRPV6Q9H1D0 765 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 COL20A1Q9P218 1284 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 PCDHA1Q9Y5I3 950 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 TRANK1O15050 2925 aa16.84■□□□□ 0.29
SMARCE1-204ENST00000400122 DHX16O60231 1041 aaKnown RBP16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 ARHGAP1Q07960 439 aa16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 LAMC2Q13753 1193 aa16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 TRIP12Q14669 1992 aaPredicted RBP16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 RAB30Q15771 203 aa16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 ARHGEF16Q5VV41 709 aa16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 CATIPQ7Z7H3 387 aa16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 VSIG10LQ86VR7 867 aa16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 TBC1D5Q92609 795 aa16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 LZTS2Q9BRK4 669 aa16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 SPZ1Q9BXG8 430 aa16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 PPP1R12CQ9BZL4 782 aa16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 DDX41Q9UJV9 622 aaKnown RBP16.83■□□□□ 0.28
SMARCE1-204ENST00000400122 TANC1Q9C0D5 1861 aa16.82■□□□□ 0.28
SMARCE1-204ENST00000400122 VCANP13611 3396 aa16.82■□□□□ 0.28
SMARCE1-204ENST00000400122 FRMPD4Q14CM0 1322 aa16.82■□□□□ 0.28
SMARCE1-204ENST00000400122 DDAH1O94760 285 aa16.82■□□□□ 0.28
SMARCE1-204ENST00000400122 ARIH2O95376 493 aa16.82■□□□□ 0.28
SMARCE1-204ENST00000400122 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
SMARCE1-204ENST00000400122 PSMC6P62333 389 aa16.82■□□□□ 0.28
SMARCE1-204ENST00000400122 NBPF20Q3BBV1 942 aa16.82■□□□□ 0.28
SMARCE1-204ENST00000400122 PPTC7Q8NI37 304 aa16.82■□□□□ 0.28
SMARCE1-204ENST00000400122 CAGE1Q8TC20 777 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms