RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 SUDS3Q9H7L9 328 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 RGPD2P0DJD1 1756 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 NWD2Q9ULI1 1742 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 FAM221AA4D161 298 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 EYA2O00167 538 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 CEBPZQ03701 1054 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 SYNE4Q8N205 404 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 FAM43AQ8N2R8 423 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 C17orf53Q8N3J3 647 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 NUP133Q8WUM0 1156 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 ATP6V1E2Q96A05 226 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 DDX11Q96FC9 970 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 TARS2Q9BW92 718 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 NAA15Q9BXJ9 866 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 MRPL9Q9BYD2 267 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 TBC1D22BQ9NU19 505 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 ARHGAP28Q9P2N2 729 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 PPARGC1AQ9UBK2 798 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 COL5A2P05997 1499 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 A0A087WWV3 80 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 GRM8O00222 908 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 FOXN3O00409 490 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 CYP27B1O15528 508 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 MICAL2O94851 1124 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 COL9A1P20849 921 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 HPDP32754 393 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 CLCN6P51797 869 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 G3BP1Q13283 466 aaKnown RBP eCLIP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 SMC1AQ14683 1233 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 TAF3Q5VWG9 929 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 ZNF790Q6PG37 636 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 TTLL7Q6ZT98 887 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 SLAIN1Q8ND83 568 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 TRMT1Q9NXH9 659 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 POTEFA5A3E0 1075 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 VGLL3A8MV65 326 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 SGSM2O43147 1006 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 SKILP12757 684 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 ALDH5A1P51649 535 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 NUCB2P80303 420 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 FAM26DQ5JW98 314 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 INTS11Q5TA45 600 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 VPS53Q5VIR6 699 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 CNTROBQ8N137 903 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 UHMK1Q8TAS1 419 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 RSRC1Q96IZ7 334 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 TRHDEQ9UKU6 1024 aa7.03□□□□□ -1.28
TRAPPC13-202ENST00000399438 USP46P62068 366 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 TIMM10P62072 90 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 GABREP78334 506 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 CACNB2Q08289 660 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 TFCP2Q12800 502 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 SPATA1Q5VX52 437 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 PCNX4Q63HM2 1172 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 ERC1Q8IUD2 1116 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 TTC5Q8N0Z6 440 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 SYTL4Q96C24 671 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 LSG1Q9H089 658 aaKnown RBP7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 ANLNQ9NQW6 1124 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 PDP2Q9P2J9 529 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 EPS15L1Q9UBC2 864 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 ITIH6Q6UXX5 1313 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 A0A087WZG4 1122 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 CYP2E1P05181 493 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 CCDC175P0C221 793 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 HOXD10P28358 340 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 CTNNA1P35221 906 aaKnown RBP7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 KRT20P35900 424 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 TRIM14Q14142 442 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 PPP2R5EQ16537 467 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 KLHL40Q2TBA0 621 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 TNNI3KQ59H18 835 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 PI16Q6UXB8 463 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 ATCAYQ86WG3 371 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 SLC41A1Q8IVJ1 513 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 TAB3Q8N5C8 712 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 RSAD2Q8WXG1 361 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 DBNDD2Q9BQY9 259 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 OCSTAMPQ9BR26 566 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 OSBPL3Q9H4L5 887 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 ATP6V0A4Q9HBG4 840 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 RRN3Q9NYV6 651 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 GJD2Q9UKL4 321 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 SLIT2O94813 1529 aa7.02□□□□□ -1.29
TRAPPC13-202ENST00000399438 UTRNP46939 3433 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 PHF20L1A8MW92 1017 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 ZBTB39O15060 712 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 AKR1B10O60218 316 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 MAN2A2P49641 1150 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 DNM1Q05193 864 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 CAMK4Q16566 473 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 SLC6A19Q695T7 634 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 GALNT17Q6IS24 598 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 TOM1L2Q6ZVM7 507 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 EPM2AIP1Q7L775 607 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 CPLX3Q8WVH0 158 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 STON2Q8WXE9 905 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 UROC1Q96N76 676 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 ECHDC1Q9NTX5 307 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms