RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 KIF5BP33176 963 aa17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 FAAP100Q0VG06 881 aa17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 PPP2R5BQ15173 497 aa17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 HOMER1Q86YM7 354 aa17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 CTCFLQ8NI51 663 aaPredicted RBP17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 TRIM43Q96BQ3 446 aaPredicted RBP17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 TAAR1Q96RJ0 339 aa17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 PIGSQ96S52 555 aa17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 RMDN3Q96TC7 470 aa17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 SEZ6LQ9BYH1 1024 aa17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 CFBP00751 764 aa17.25■□□□□ 0.35
SMIM11A-203ENST00000399299 TSGA10IPQ3SY00 556 aa17.25■□□□□ 0.35
SMIM11A-203ENST00000399299 CXCL17Q6UXB2 119 aa17.25■□□□□ 0.35
SMIM11A-203ENST00000399299 SLC43A3Q8NBI5 491 aa17.25■□□□□ 0.35
SMIM11A-203ENST00000399299 BADQ92934 168 aa17.25■□□□□ 0.35
SMIM11A-203ENST00000399299 VTI1AQ96AJ9 217 aa17.25■□□□□ 0.35
SMIM11A-203ENST00000399299 LZTS2Q9BRK4 669 aa17.25■□□□□ 0.35
SMIM11A-203ENST00000399299 SPZ1Q9BXG8 430 aa17.25■□□□□ 0.35
SMIM11A-203ENST00000399299 GPHNQ9NQX3 736 aaPredicted RBP17.25■□□□□ 0.35
SMIM11A-203ENST00000399299 CCDC69A6NI79 296 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 SOX1O00570 391 aaPredicted RBP17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 CALM1P0DP23 149 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 CALM2P0DP24 149 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 CALM3P0DP25 149 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 PTGS1P23219 599 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 GNAQP50148 359 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 CPT1AP50416 773 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 COL9A3Q14050 684 aaPredicted RBP17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 TTLL4Q14679 1199 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 STXBP2Q15833 593 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 GPR153Q6NV75 609 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 SGMS1Q86VZ5 419 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 FAM126BQ8IXS8 530 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 PXMP2Q9NR77 195 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 TMEM39AQ9NV64 488 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 POLR3EQ9NVU0 708 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 TBX21Q9UL17 535 aa17.24■□□□□ 0.35
SMIM11A-203ENST00000399299 LAMA2P24043 3122 aaKnown RBP17.23■□□□□ 0.35
SMIM11A-203ENST00000399299 RAG1P15918 1043 aa17.23■□□□□ 0.35
SMIM11A-203ENST00000399299 BRDTQ58F21 947 aaPredicted RBP17.23■□□□□ 0.35
SMIM11A-203ENST00000399299 ARHGEF16Q5VV41 709 aa17.23■□□□□ 0.35
SMIM11A-203ENST00000399299 CCDC62Q6P9F0 684 aa17.23■□□□□ 0.35
SMIM11A-203ENST00000399299 NFXL1Q6ZNB6 911 aa17.23■□□□□ 0.35
SMIM11A-203ENST00000399299 OR6J1Q8NGC5 347 aa17.23■□□□□ 0.35
SMIM11A-203ENST00000399299 NEK1Q96PY6 1258 aa17.23■□□□□ 0.35
SMIM11A-203ENST00000399299 MYL10Q9BUA6 226 aa17.23■□□□□ 0.35
SMIM11A-203ENST00000399299 SCN10AQ9Y5Y9 1956 aa17.22■□□□□ 0.35
SMIM11A-203ENST00000399299 A6NJR5 290 aa17.22■□□□□ 0.35
SMIM11A-203ENST00000399299 TLR3O15455 904 aaKnown RBP17.22■□□□□ 0.35
SMIM11A-203ENST00000399299 EIF3JO75822 258 aaKnown RBP17.22■□□□□ 0.35
SMIM11A-203ENST00000399299 NR3C2P08235 984 aa17.22■□□□□ 0.35
SMIM11A-203ENST00000399299 TXNP10599 105 aaKnown RBP17.22■□□□□ 0.35
SMIM11A-203ENST00000399299 ITGB8P26012 769 aa17.22■□□□□ 0.35
SMIM11A-203ENST00000399299 ITGA7Q13683 1181 aa17.22■□□□□ 0.35
SMIM11A-203ENST00000399299 KRT32Q14532 448 aa17.22■□□□□ 0.35
SMIM11A-203ENST00000399299 LRCH3Q96II8 777 aa17.22■□□□□ 0.35
SMIM11A-203ENST00000399299 GCOM1H8Y6P7 765 aaPredicted RBP17.21■□□□□ 0.35
SMIM11A-203ENST00000399299 KPNA6O60684 536 aa17.21■□□□□ 0.35
SMIM11A-203ENST00000399299 ARIH2O95376 493 aa17.21■□□□□ 0.35
SMIM11A-203ENST00000399299 TIMP1P01033 207 aa17.21■□□□□ 0.35
SMIM11A-203ENST00000399299 CD4P01730 458 aa17.21■□□□□ 0.35
SMIM11A-203ENST00000399299 POLR2MP0CAP2 368 aa17.21■□□□□ 0.35
SMIM11A-203ENST00000399299 EIF2AK2P19525 551 aaKnown RBP17.21■□□□□ 0.35
SMIM11A-203ENST00000399299 PURAQ00577 322 aaKnown RBP17.21■□□□□ 0.35
SMIM11A-203ENST00000399299 RASEFQ8IZ41 740 aa17.21■□□□□ 0.35
SMIM11A-203ENST00000399299 RRP36Q96EU6 259 aaKnown RBP17.21■□□□□ 0.35
SMIM11A-203ENST00000399299 PDCD2LQ9BRP1 358 aa17.21■□□□□ 0.35
SMIM11A-203ENST00000399299 SLC12A7Q9Y666 1083 aa17.21■□□□□ 0.35
SMIM11A-203ENST00000399299 GRIN2DO15399 1336 aa17.21■□□□□ 0.34
SMIM11A-203ENST00000399299 HOXA13P31271 388 aaPredicted RBP17.2■□□□□ 0.34
SMIM11A-203ENST00000399299 EXOSC10Q01780 885 aaKnown RBP17.2■□□□□ 0.34
SMIM11A-203ENST00000399299 SEPT14Q6ZU15 432 aa17.2■□□□□ 0.34
SMIM11A-203ENST00000399299 DHX32Q7L7V1 743 aaKnown RBP17.2■□□□□ 0.34
SMIM11A-203ENST00000399299 LRRC2Q9BYS8 371 aa17.2■□□□□ 0.34
SMIM11A-203ENST00000399299 SEC63Q9UGP8 760 aaKnown RBP17.2■□□□□ 0.34
SMIM11A-203ENST00000399299 PLEKHA8P1O95397 391 aa17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 GH1P01241 217 aa17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 FPGSQ05932 587 aa17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 PGM5Q15124 567 aa17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 VSIG10LQ86VR7 867 aa17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 SRBD1Q8N5C6 995 aaKnown RBP17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 FANCBQ8NB91 859 aa17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 COPS5Q92905 334 aa17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 KCNB2Q92953 911 aa17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 MTG1Q9BT17 334 aaPredicted RBP17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 FRMPD4Q14CM0 1322 aa17.19■□□□□ 0.34
SMIM11A-203ENST00000399299 MYL3P08590 195 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 RXRAP19793 462 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 PSMC6P62333 389 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 ARHGAP1Q07960 439 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 SHHQ15465 462 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 ADCK5Q3MIX3 580 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 C9orf50Q5SZB4 431 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 MFSD5Q6N075 450 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 KCNV1Q6PIU1 500 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 APOA5Q6Q788 366 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 SYNE3Q6ZMZ3 975 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 TMTC3Q6ZXV5 915 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms