RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 PLCG1P19174 1290 aa15.51■□□□□ 0.07
APOB-202ENST00000399256 CFAP58Q5T655 872 aa15.51■□□□□ 0.07
APOB-202ENST00000399256 DZIP3Q86Y13 1208 aaKnown RBP15.51■□□□□ 0.07
APOB-202ENST00000399256 PLAGL2Q9UPG8 496 aa15.51■□□□□ 0.07
APOB-202ENST00000399256 MYH10P35580 1976 aa15.51■□□□□ 0.07
APOB-202ENST00000399256 WTIPA6NIX2 430 aaPredicted RBP15.51■□□□□ 0.07
APOB-202ENST00000399256 ZNF233A6NK53 670 aa15.51■□□□□ 0.07
APOB-202ENST00000399256 USP8P40818 1118 aa15.51■□□□□ 0.07
APOB-202ENST00000399256 GYG1P46976 350 aa15.51■□□□□ 0.07
APOB-202ENST00000399256 TMC4Q7Z404 712 aa15.51■□□□□ 0.07
APOB-202ENST00000399256 THSD7AQ9UPZ6 1657 aa15.51■□□□□ 0.07
APOB-202ENST00000399256 LRRC53A6NM62 1247 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 MEFVO15553 781 aaPredicted RBP15.5■□□□□ 0.07
APOB-202ENST00000399256 CALML3P27482 149 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 LSP1P33241 339 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 MAGEA1P43355 309 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 FNTAP49354 379 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 RASSF7Q02833 373 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 GUCY2DQ02846 1103 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 RRAGAQ7L523 313 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
APOB-202ENST00000399256 TLR10Q9BXR5 811 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 EPB41L5Q9HCM4 733 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 PCDHA4Q9UN74 947 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 AFF2P51816 1311 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 KAT6BQ8WYB5 2073 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 GFPT1Q06210 699 aaPredicted RBP15.5■□□□□ 0.07
APOB-202ENST00000399256 FIGNQ5HY92 759 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 RNF187Q5TA31 235 aaPredicted RBP15.5■□□□□ 0.07
APOB-202ENST00000399256 NAA35Q5VZE5 725 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 MTMR8Q96EF0 704 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 CICQ96RK0 1608 aaPredicted RBP15.5■□□□□ 0.07
APOB-202ENST00000399256 HEXIM1O94992 359 aaKnown RBP15.5■□□□□ 0.07
APOB-202ENST00000399256 SEC24CP53992 1094 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 CHRNDQ07001 517 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 SUSD4Q5VX71 490 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 IFT20Q8IY31 132 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 SLC4A9Q96Q91 983 aa15.5■□□□□ 0.07
APOB-202ENST00000399256 CYP19A1P11511 503 aaPredicted RBP15.49■□□□□ 0.07
APOB-202ENST00000399256 MAP2K2P36507 400 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 IGHMBP2P38935 993 aaKnown RBP15.49■□□□□ 0.07
APOB-202ENST00000399256 KDM7AQ6ZMT4 941 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 CCDC47Q96A33 483 aaKnown RBP15.49■□□□□ 0.07
APOB-202ENST00000399256 CABS1Q96KC9 395 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 TRIM9Q9C026 710 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 SLC39A2Q9NP94 309 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 MTMR7Q9Y216 660 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 MYL1P05976 194 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 CYP2D6P10635 497 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 TNFRSF8P28908 595 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 SLC1A4P43007 532 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 KLHDC7AQ5VTJ3 777 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 CABP7Q86V35 215 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 BRIP1Q9BX63 1249 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 CCSER1Q9C0I3 900 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 SEMA6BQ9H3T3 888 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 SIK3Q9Y2K2 1263 aa15.49■□□□□ 0.07
APOB-202ENST00000399256 NR1D1P20393 614 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 HNRNPH3P31942 346 aaKnown RBP15.48■□□□□ 0.07
APOB-202ENST00000399256 GSCP56915 257 aaPredicted RBP15.48■□□□□ 0.07
APOB-202ENST00000399256 RNASE9P60153 205 aaKnown RBP15.48■□□□□ 0.07
APOB-202ENST00000399256 VWA3BQ502W6 1294 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 ZNF473Q8WTR7 871 aaKnown RBP15.48■□□□□ 0.07
APOB-202ENST00000399256 EPN3Q9H201 632 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 PCDHA6Q9UN73 950 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 PCDHA8Q9Y5H6 950 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 SETQ01105 290 aaPredicted RBP15.48■□□□□ 0.07
APOB-202ENST00000399256 TRADDQ15628 312 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 TXNRD1Q16881 649 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 ZNF34Q8IZ26 560 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 IQCKQ8N0W5 287 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 STAG2Q8N3U4 1231 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 PIK3R5Q8WYR1 880 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 JPH2Q9BR39 696 aaPredicted RBP15.48■□□□□ 0.07
APOB-202ENST00000399256 NDST4Q9H3R1 872 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 CXorf56Q9H5V9 222 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 FLT1P17948 1338 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 A6NNZ2 444 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 FSBPO95073 299 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 HDLBPQ00341 1268 aaKnown RBP15.48■□□□□ 0.07
APOB-202ENST00000399256 TUBB8Q3ZCM7 444 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 CFAP221Q4G0U5 840 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 KIAA0895Q8NCT3 520 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 NOX5Q96PH1 765 aa15.48■□□□□ 0.07
APOB-202ENST00000399256 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.48■□□□□ 0.07
APOB-202ENST00000399256 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 TSPY2A6NKD2 308 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 LCA5LO95447 670 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 FGRP09769 529 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 PAK2Q13177 524 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 PTGISQ16647 500 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 ZNF384Q8TF68 577 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 KRT12Q99456 494 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 CD248Q9HCU0 757 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 GDF3Q9NR23 364 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 ATXN2Q99700 1313 aaKnown RBP15.47■□□□□ 0.07
APOB-202ENST00000399256 PPP1R37O75864 691 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 FTCDO95954 541 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 TDRD12Q587J7 1177 aaKnown RBP15.47■□□□□ 0.07
APOB-202ENST00000399256 HEATR3Q7Z4Q2 680 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms