RNA–Protein interactions for RNA: ENST00000398989.2

TUBA4A-203, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-203ENST00000398989 GNEQ9Y223 722 aaKnown RBP16.14■□□□□ 0.17
TUBA4A-203ENST00000398989 hCG_1642624A0A1W2PR95 340 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 GOLGA8AA7E2F4 631 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 GOLGA8BA8MQT2 603 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 GCOM1H8Y6P7 765 aaPredicted RBP16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 POLR2MP0CAP2 368 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 SYN1P17600 705 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 CST5P28325 142 aaPredicted RBP16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 RTP1P59025 263 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 BEX3Q00994 111 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 APOBRQ0VD83 1088 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 RTN1Q16799 776 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 GNASQ5JWF2 1037 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 CCSAPQ6IQ19 270 aaPredicted RBP16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 SAMD3Q8N6K7 520 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 PCSK9Q8NBP7 692 aaKnown RBP16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 BRF1Q92994 677 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 IWS1Q96ST2 819 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 AP5M1Q9H0R1 490 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 PXMP2Q9NR77 195 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 MAP3K20Q9NYL2 800 aaKnown RBP16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 ZMYND8Q9ULU4 1186 aaPredicted RBP16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 ATP11BQ9Y2G3 1177 aa16.13■□□□□ 0.17
TUBA4A-203ENST00000398989 RBM47A0AV96 593 aaKnown RBP16.12■□□□□ 0.17
TUBA4A-203ENST00000398989 MOXD2PA6NHM9 499 aa16.12■□□□□ 0.17
TUBA4A-203ENST00000398989 CTAGE5O15320 804 aa16.12■□□□□ 0.17
TUBA4A-203ENST00000398989 DYNC1LI2O43237 492 aaPredicted RBP16.12■□□□□ 0.17
TUBA4A-203ENST00000398989 ASGR1P07306 291 aa16.12■□□□□ 0.17
TUBA4A-203ENST00000398989 STXBP2Q15833 593 aa16.12■□□□□ 0.17
TUBA4A-203ENST00000398989 DUSP28Q4G0W2 176 aa16.12■□□□□ 0.17
TUBA4A-203ENST00000398989 SCFD2Q8WU76 684 aa16.12■□□□□ 0.17
TUBA4A-203ENST00000398989 CNTNAP5Q8WYK1 1306 aa16.12■□□□□ 0.17
TUBA4A-203ENST00000398989 TRIOBPQ9H2D6 2365 aa16.12■□□□□ 0.17
TUBA4A-203ENST00000398989 METAP2P50579 478 aaKnown RBP eCLIP16.11■□□□□ 0.17
TUBA4A-203ENST00000398989 RCAN1P53805 252 aa16.11■□□□□ 0.17
TUBA4A-203ENST00000398989 SNX17Q15036 470 aa16.11■□□□□ 0.17
TUBA4A-203ENST00000398989 PPP2R5BQ15173 497 aa16.11■□□□□ 0.17
TUBA4A-203ENST00000398989 FSCN1Q16658 493 aaKnown RBP16.11■□□□□ 0.17
TUBA4A-203ENST00000398989 TRIM60Q495X7 471 aa16.11■□□□□ 0.17
TUBA4A-203ENST00000398989 CHRDL2Q6WN34 429 aa16.11■□□□□ 0.17
TUBA4A-203ENST00000398989 RUFY3Q7L099 469 aa16.11■□□□□ 0.17
TUBA4A-203ENST00000398989 FCHSD1Q86WN1 690 aa16.11■□□□□ 0.17
TUBA4A-203ENST00000398989 STARD7Q9NQZ5 370 aa16.11■□□□□ 0.17
TUBA4A-203ENST00000398989 COLQQ9Y215 455 aaPredicted RBP16.11■□□□□ 0.17
TUBA4A-203ENST00000398989 Q9Y3F1 56 aa16.11■□□□□ 0.17
TUBA4A-203ENST00000398989 NR3C2P08235 984 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 TXNP10599 105 aaKnown RBP16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 MYCLP12524 364 aaPredicted RBP16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 CDC27P30260 824 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 NKX3-2P78367 333 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 TTLL4Q14679 1199 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 C1orf53Q5VUE5 145 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 SEPT14Q6ZU15 432 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 HEATR3Q7Z4Q2 680 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 FBXL16Q8N461 479 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 VTI1AQ96AJ9 217 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 GLT1D1Q96MS3 346 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 PDCD2LQ9BRP1 358 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 FAM217BQ9NTX9 383 aaPredicted RBP16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 PCDH10Q9P2E7 1040 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 CYP46A1Q9Y6A2 500 aa16.1■□□□□ 0.17
TUBA4A-203ENST00000398989 EIF3JO75822 258 aaKnown RBP16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 ARIH2O95376 493 aa16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 FUT2Q10981 343 aa16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 PGM5Q15124 567 aa16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 USP17L6PQ6QN14 398 aa16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 OR6J1Q8NGC5 347 aa16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 SMARCC2Q8TAQ2 1214 aa16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 COPS5Q92905 334 aa16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 GPKOWQ92917 476 aaPredicted RBP eCLIP16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 CUL5Q93034 780 aa16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 AGXT2Q9BYV1 514 aa16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 UPF3BQ9BZI7 483 aaKnown RBP16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 MYH7BA7E2Y1 1941 aa16.09■□□□□ 0.17
TUBA4A-203ENST00000398989 CCDC196A0A1B0GTZ2 297 aa16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 NKRFO15226 690 aaKnown RBP eCLIP16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 ZEB2O60315 1214 aa16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 ADD1P35611 737 aaKnown RBP16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 CXCL17Q6UXB2 119 aa16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 IL31RAQ8NI17 732 aa16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 TM6SF1Q9BZW5 370 aa16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 PSTPIP2Q9H939 334 aa16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 PRDM5Q9NQX1 630 aaPredicted RBP16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 PRKAG2Q9UGJ0 569 aa16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 V9GY48 417 aaPredicted RBP16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 ELP1O95163 1332 aa16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 LTBP2Q14767 1821 aa16.08■□□□□ 0.16
TUBA4A-203ENST00000398989 PIK3CDO00329 1044 aa16.07■□□□□ 0.16
TUBA4A-203ENST00000398989 MEIS2O14770 477 aa16.07■□□□□ 0.16
TUBA4A-203ENST00000398989 PQBP1O60828 265 aaKnown RBP16.07■□□□□ 0.16
TUBA4A-203ENST00000398989 CCND2P30279 289 aa16.07■□□□□ 0.16
TUBA4A-203ENST00000398989 TLE2Q04725 743 aa16.07■□□□□ 0.16
TUBA4A-203ENST00000398989 TOB2Q14106 344 aaPredicted RBP16.07■□□□□ 0.16
TUBA4A-203ENST00000398989 LY6KQ17RY6 165 aa16.07■□□□□ 0.16
TUBA4A-203ENST00000398989 WWC2Q6AWC2 1192 aa16.07■□□□□ 0.16
TUBA4A-203ENST00000398989 VSIG10LQ86VR7 867 aa16.07■□□□□ 0.16
TUBA4A-203ENST00000398989 RBM27Q9P2N5 1060 aaKnown RBP16.07■□□□□ 0.16
TUBA4A-203ENST00000398989 NID2Q14112 1375 aa16.07■□□□□ 0.16
TUBA4A-203ENST00000398989 FRMPD4Q14CM0 1322 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms