RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 BICDL2A1A5D9 508 aa21.74■■□□□ 1.07
COL13A1-205ENST00000398978 SYF2O95926 243 aaKnown RBP21.74■■□□□ 1.07
COL13A1-205ENST00000398978 UBE2SQ16763 222 aa21.74■■□□□ 1.07
COL13A1-205ENST00000398978 WDR93Q6P2C0 686 aa21.74■■□□□ 1.07
COL13A1-205ENST00000398978 NFRKBQ6P4R8 1299 aa21.74■■□□□ 1.07
COL13A1-205ENST00000398978 CALML4Q96GE6 196 aa21.74■■□□□ 1.07
COL13A1-205ENST00000398978 C7orf25Q9BPX7 421 aa21.74■■□□□ 1.07
COL13A1-205ENST00000398978 DEF6Q9H4E7 631 aa21.74■■□□□ 1.07
COL13A1-205ENST00000398978 F8W031 263 aaPredicted RBP21.74■■□□□ 1.07
COL13A1-205ENST00000398978 REXO1Q8N1G1 1221 aaKnown RBP21.74■■□□□ 1.07
COL13A1-205ENST00000398978 PNMA5Q96PV4 448 aa21.74■■□□□ 1.07
COL13A1-205ENST00000398978 TANGO6Q9C0B7 1094 aa21.74■■□□□ 1.07
COL13A1-205ENST00000398978 EP400Q96L91 3159 aa21.74■■□□□ 1.07
COL13A1-205ENST00000398978 EIF3CLB5ME19 914 aaKnown RBP21.74■■□□□ 1.07
COL13A1-205ENST00000398978 SSBP05455 408 aaKnown RBP eCLIP21.74■■□□□ 1.07
COL13A1-205ENST00000398978 PRPHP41219 470 aa21.74■■□□□ 1.07
COL13A1-205ENST00000398978 CACNB1Q02641 598 aaPredicted RBP21.74■■□□□ 1.07
COL13A1-205ENST00000398978 SPA17Q15506 151 aa21.74■■□□□ 1.07
COL13A1-205ENST00000398978 EIF3CQ99613 913 aaKnown RBP21.74■■□□□ 1.07
COL13A1-205ENST00000398978 IFIH1Q9BYX4 1025 aaKnown RBP21.74■■□□□ 1.07
COL13A1-205ENST00000398978 MYH1P12882 1939 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 VGLL3A8MV65 326 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 CALCRLQ16602 461 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 LEKR1Q6ZMV7 388 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 SV2BQ7L1I2 683 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 CDK5RAP3Q96JB5 506 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 NLRC4Q9NPP4 1024 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 SALL4Q9UJQ4 1053 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 HPCAL4Q9UM19 191 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 WNK3Q9BYP7 1800 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 LRRC53A6NM62 1247 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 BUB1O43683 1085 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 TNNI2P48788 182 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 NDST4Q9H3R1 872 aa21.73■■□□□ 1.07
COL13A1-205ENST00000398978 TULP2O00295 520 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 AKR1B10O60218 316 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 GGCXP38435 758 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 GPSM2P81274 684 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 GOLGA5Q8TBA6 731 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 PCDHA13Q9Y5I0 950 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 LAD1O00515 517 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 EDIL3O43854 480 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 RAD21O60216 631 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 GNA11P29992 359 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 KIF11P52732 1056 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 VAV2P52735 878 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 ECM1Q16610 540 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 FAM71BQ8TC56 605 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 DMGDHQ9UI17 866 aaKnown RBP21.72■■□□□ 1.07
COL13A1-205ENST00000398978 SNED1Q8TER0 1413 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 RREB1Q92766 1687 aa21.72■■□□□ 1.07
COL13A1-205ENST00000398978 RPS6KA4O75676 772 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 UFL1O94874 794 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 GFPT1Q06210 699 aaPredicted RBP21.71■■□□□ 1.07
COL13A1-205ENST00000398978 VWA3BQ502W6 1294 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 GALNT17Q6IS24 598 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 CNNM4Q6P4Q7 775 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 NOC3LQ8WTT2 800 aaKnown RBP21.71■■□□□ 1.07
COL13A1-205ENST00000398978 CRACR2AQ9BSW2 395 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 LRRC1Q9BTT6 524 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 NUP58Q9BVL2 599 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 SPZ1Q9BXG8 430 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 RTCBQ9Y3I0 505 aaKnown RBP21.71■■□□□ 1.07
COL13A1-205ENST00000398978 AK8Q96MA6 479 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 SELENOOQ9BVL4 669 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 FGFBP2Q9BYJ0 223 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 CCNL1Q9UK58 526 aaPredicted RBP21.71■■□□□ 1.07
COL13A1-205ENST00000398978 MYL1P05976 194 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 NAP1L1P55209 391 aaKnown RBP21.71■■□□□ 1.07
COL13A1-205ENST00000398978 MUM1L1Q5H9M0 696 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 FAM114A1Q8IWE2 563 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 SNX29Q8TEQ0 813 aa21.71■■□□□ 1.07
COL13A1-205ENST00000398978 LARP4BQ92615 738 aaKnown RBP21.71■■□□□ 1.07
COL13A1-205ENST00000398978 SLC16A2P36021 539 aa21.7■■□□□ 1.06
COL13A1-205ENST00000398978 ARID5AQ03989 594 aa21.7■■□□□ 1.06
COL13A1-205ENST00000398978 ERGIC2Q96RQ1 377 aa21.7■■□□□ 1.06
COL13A1-205ENST00000398978 PSD3Q9NYI0 1048 aa21.7■■□□□ 1.06
COL13A1-205ENST00000398978 FEZ2Q9UHY8 353 aaPredicted RBP21.7■■□□□ 1.06
COL13A1-205ENST00000398978 AMPD3Q01432 767 aa21.7■■□□□ 1.06
COL13A1-205ENST00000398978 CREG2Q8IUH2 290 aa21.7■■□□□ 1.06
COL13A1-205ENST00000398978 RSPH14Q9UHP6 348 aa21.7■■□□□ 1.06
COL13A1-205ENST00000398978 SIK3Q9Y2K2 1263 aa21.7■■□□□ 1.06
COL13A1-205ENST00000398978 RASSF7Q02833 373 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 CENPPQ6IPU0 288 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 ZNF804AQ7Z570 1209 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 CCDC170Q8IYT3 715 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 DDX12PQ92771 950 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 MS4A14Q96JA4 679 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 RNASE9P60153 205 aaKnown RBP21.69■■□□□ 1.06
COL13A1-205ENST00000398978 GSTO1P78417 241 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 MFSD14BQ5SR56 506 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 TTBK2Q6IQ55 1244 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 C16orf86Q6ZW13 317 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 ZSCAN29Q8IWY8 852 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-205ENST00000398978 NELFCDQ8IXH7 590 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 NEDD1Q8NHV4 660 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 CD209Q9NNX6 404 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 FAM170AA1A519 330 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 GRAPQ13588 217 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 EHBP1Q8NDI1 1231 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms