RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 ARIH2O95376 493 aa16.73■□□□□ 0.27
COL13A1-204ENST00000398975 C6orf222P0C671 652 aaPredicted RBP16.73■□□□□ 0.27
COL13A1-204ENST00000398975 ACLYP53396 1101 aa16.73■□□□□ 0.27
COL13A1-204ENST00000398975 PDE4DQ08499 809 aa16.73■□□□□ 0.27
COL13A1-204ENST00000398975 TOB2Q14106 344 aaPredicted RBP16.73■□□□□ 0.27
COL13A1-204ENST00000398975 SNX17Q15036 470 aa16.73■□□□□ 0.27
COL13A1-204ENST00000398975 IQSEC1Q6DN90 963 aa16.73■□□□□ 0.27
COL13A1-204ENST00000398975 SLC39A5Q6ZMH5 540 aa16.73■□□□□ 0.27
COL13A1-204ENST00000398975 RUFY3Q7L099 469 aa16.73■□□□□ 0.27
COL13A1-204ENST00000398975 RNF180Q86T96 592 aa16.73■□□□□ 0.27
COL13A1-204ENST00000398975 NSUN6Q8TEA1 469 aaKnown RBP16.73■□□□□ 0.27
COL13A1-204ENST00000398975 UPF3BQ9BZI7 483 aaKnown RBP16.73■□□□□ 0.27
COL13A1-204ENST00000398975 ZMYND8Q9ULU4 1186 aaPredicted RBP16.73■□□□□ 0.27
COL13A1-204ENST00000398975 ADD1P35611 737 aaKnown RBP16.72■□□□□ 0.27
COL13A1-204ENST00000398975 RTP1P59025 263 aa16.72■□□□□ 0.27
COL13A1-204ENST00000398975 DUSP28Q4G0W2 176 aa16.72■□□□□ 0.27
COL13A1-204ENST00000398975 TYW1BQ6NUM6 668 aa16.72■□□□□ 0.27
COL13A1-204ENST00000398975 SYNE3Q6ZMZ3 975 aa16.72■□□□□ 0.27
COL13A1-204ENST00000398975 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
COL13A1-204ENST00000398975 TLK2Q86UE8 772 aa16.72■□□□□ 0.27
COL13A1-204ENST00000398975 COPS5Q92905 334 aa16.72■□□□□ 0.27
COL13A1-204ENST00000398975 GPKOWQ92917 476 aaPredicted RBP eCLIP16.72■□□□□ 0.27
COL13A1-204ENST00000398975 ZFP91Q96JP5 570 aaPredicted RBP16.72■□□□□ 0.27
COL13A1-204ENST00000398975 PDCD2LQ9BRP1 358 aa16.72■□□□□ 0.27
COL13A1-204ENST00000398975 LARP6Q9BRS8 491 aaKnown RBP16.72■□□□□ 0.27
COL13A1-204ENST00000398975 TSEN34Q9BSV6 310 aaKnown RBP16.72■□□□□ 0.27
COL13A1-204ENST00000398975 WDR11Q9BZH6 1224 aa16.72■□□□□ 0.27
COL13A1-204ENST00000398975 NID2Q14112 1375 aa16.72■□□□□ 0.27
COL13A1-204ENST00000398975 GCOM1H8Y6P7 765 aaPredicted RBP16.71■□□□□ 0.27
COL13A1-204ENST00000398975 MEIS2O14770 477 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 DYNC1LI2O43237 492 aaPredicted RBP16.71■□□□□ 0.27
COL13A1-204ENST00000398975 RGS20O76081 388 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 NR3C2P08235 984 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 POLR2MP0CAP2 368 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 SYN1P17600 705 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 PSMA5P28066 241 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 RCAN1P53805 252 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 EVCP57679 992 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 TRIM60Q495X7 471 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 GNASQ5JWF2 1037 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 CCDC62Q6P9F0 684 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 USP17L6PQ6QN14 398 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 FCHSD1Q86WN1 690 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 IWS1Q96ST2 819 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 TM6SF1Q9BZW5 370 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 RBM28Q9NW13 759 aaKnown RBP16.71■□□□□ 0.27
COL13A1-204ENST00000398975 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.27
COL13A1-204ENST00000398975 NR2E3Q9Y5X4 410 aa16.71■□□□□ 0.27
COL13A1-204ENST00000398975 FRMPD4Q14CM0 1322 aa16.7■□□□□ 0.26
COL13A1-204ENST00000398975 ASGR1P07306 291 aa16.7■□□□□ 0.26
COL13A1-204ENST00000398975 FGD1P98174 961 aa16.7■□□□□ 0.26
COL13A1-204ENST00000398975 ARHGEF16Q5VV41 709 aa16.7■□□□□ 0.26
COL13A1-204ENST00000398975 WWC2Q6AWC2 1192 aa16.7■□□□□ 0.26
COL13A1-204ENST00000398975 PPP4R3CPQ6ZMV5 832 aa16.7■□□□□ 0.26
COL13A1-204ENST00000398975 PRO3102Q9H379 93 aa16.7■□□□□ 0.26
COL13A1-204ENST00000398975 MAP3K20Q9NYL2 800 aaKnown RBP16.7■□□□□ 0.26
COL13A1-204ENST00000398975 SEC63Q9UGP8 760 aaKnown RBP16.7■□□□□ 0.26
COL13A1-204ENST00000398975 V9GY48 417 aaPredicted RBP16.7■□□□□ 0.26
COL13A1-204ENST00000398975 LTBP2Q14767 1821 aa16.69■□□□□ 0.26
COL13A1-204ENST00000398975 PDIA3P30101 505 aaKnown RBP16.69■□□□□ 0.26
COL13A1-204ENST00000398975 METAP2P50579 478 aaKnown RBP eCLIP16.69■□□□□ 0.26
COL13A1-204ENST00000398975 TRAF1Q13077 416 aa16.69■□□□□ 0.26
COL13A1-204ENST00000398975 PGM5Q15124 567 aa16.69■□□□□ 0.26
COL13A1-204ENST00000398975 STXBP2Q15833 593 aa16.69■□□□□ 0.26
COL13A1-204ENST00000398975 FSCN1Q16658 493 aaKnown RBP16.69■□□□□ 0.26
COL13A1-204ENST00000398975 SEPT14Q6ZU15 432 aa16.69■□□□□ 0.26
COL13A1-204ENST00000398975 VSIG10LQ86VR7 867 aa16.69■□□□□ 0.26
COL13A1-204ENST00000398975 SAMD3Q8N6K7 520 aa16.69■□□□□ 0.26
COL13A1-204ENST00000398975 SCFD2Q8WU76 684 aa16.69■□□□□ 0.26
COL13A1-204ENST00000398975 NCOA5Q9HCD5 579 aaKnown RBP16.69■□□□□ 0.26
COL13A1-204ENST00000398975 COLQQ9Y215 455 aaPredicted RBP16.69■□□□□ 0.26
COL13A1-204ENST00000398975 ATP11BQ9Y2G3 1177 aa16.69■□□□□ 0.26
COL13A1-204ENST00000398975 Q9Y3F1 56 aa16.69■□□□□ 0.26
COL13A1-204ENST00000398975 CYP46A1Q9Y6A2 500 aa16.69■□□□□ 0.26
COL13A1-204ENST00000398975 MOXD2PA6NHM9 499 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 PIK3CDO00329 1044 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 ADAMTS3O15072 1205 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 PPFIA3O75145 1194 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 MYCLP12524 364 aaPredicted RBP16.68■□□□□ 0.26
COL13A1-204ENST00000398975 MRPS9P82933 396 aaKnown RBP16.68■□□□□ 0.26
COL13A1-204ENST00000398975 TLE2Q04725 743 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 NTRK3Q16288 839 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 UBE2SQ16763 222 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 C8orf34Q49A92 452 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 C1orf53Q5VUE5 145 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 CXCL17Q6UXB2 119 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 HEATR3Q7Z4Q2 680 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 IL17RAQ96F46 866 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 AP5M1Q9H0R1 490 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 GRIN2DO15399 1336 aa16.68■□□□□ 0.26
COL13A1-204ENST00000398975 STXBP3O00186 592 aa16.67■□□□□ 0.26
COL13A1-204ENST00000398975 EIF3JO75822 258 aaKnown RBP16.67■□□□□ 0.26
COL13A1-204ENST00000398975 TXNP10599 105 aaKnown RBP16.67■□□□□ 0.26
COL13A1-204ENST00000398975 CCT2P78371 535 aaKnown RBP16.67■□□□□ 0.26
COL13A1-204ENST00000398975 ARHGAP1Q07960 439 aa16.67■□□□□ 0.26
COL13A1-204ENST00000398975 PPP2R5BQ15173 497 aa16.67■□□□□ 0.26
COL13A1-204ENST00000398975 PKN1Q16512 942 aa16.67■□□□□ 0.26
COL13A1-204ENST00000398975 LY6KQ17RY6 165 aa16.67■□□□□ 0.26
COL13A1-204ENST00000398975 CHRDL2Q6WN34 429 aa16.67■□□□□ 0.26
COL13A1-204ENST00000398975 SH3RF1Q7Z6J0 888 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms