RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 CCHCR1Q8TD31 782 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 PLEKHF1Q96S99 279 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 UBXN6Q9BZV1 441 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 ATP6V0A2Q9Y487 856 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 EPN1Q9Y6I3 576 aaPredicted RBP10.21□□□□□ -0.78
CDH23-203ENST00000398788 ATP7BP35670 1465 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 PPFIBP2Q8ND30 876 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 MGARPQ8TDB4 240 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 KCNB2Q92953 911 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 FGD4Q96M96 766 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 LLPHQ9BRT6 129 aaKnown RBP10.2□□□□□ -0.78
CDH23-203ENST00000398788 VCX3BQ9H321 246 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 EPB41L5Q9HCM4 733 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 VCX3AQ9NNX9 186 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 NFU1Q9UMS0 254 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 NEXMIFQ5QGS0 1516 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 ESYT3A0FGR9 886 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 IL6STP40189 918 aaPredicted RBP10.2□□□□□ -0.78
CDH23-203ENST00000398788 CCDC65Q8IXS2 484 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 SUPT20HQ8NEM7 779 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 PPP1R14CQ8TAE6 165 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 MRRFQ96E11 262 aaKnown RBP10.2□□□□□ -0.78
CDH23-203ENST00000398788 CYFIP2Q96F07 1278 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 PLVAPQ9BX97 442 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 HOMER3Q9NSC5 361 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 SCOCQ9UIL1 159 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 BCS1LQ9Y276 419 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 NEURL4Q96JN8 1562 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 FERP16591 822 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 PPM1FP49593 454 aaPredicted RBP10.2□□□□□ -0.78
CDH23-203ENST00000398788 DOK7Q18PE1 504 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 ALS2CLQ60I27 953 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 RBM43Q6ZSC3 357 aaKnown RBP10.2□□□□□ -0.78
CDH23-203ENST00000398788 VSIG1Q86XK7 387 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 TRIM42Q8IWZ5 723 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 FMR1NBQ8N0W7 255 aaPredicted RBP10.2□□□□□ -0.78
CDH23-203ENST00000398788 MYCBPAPQ8TBZ2 947 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 FAM207AQ9NSI2 230 aaPredicted RBP10.2□□□□□ -0.78
CDH23-203ENST00000398788 STIM2Q9P246 746 aa10.2□□□□□ -0.78
CDH23-203ENST00000398788 STXBP3O00186 592 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 CTSWP56202 376 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 ICA1Q05084 483 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 DEUP1Q05D60 604 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 USP37Q86T82 979 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 ZNF589Q86UQ0 364 aaPredicted RBP10.19□□□□□ -0.78
CDH23-203ENST00000398788 KSR1Q8IVT5 923 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 IFNL3Q8IZI9 196 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 TRIM7Q9C029 511 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 ZFATQ9P243 1243 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 MYO3AQ8NEV4 1616 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 ZNF189O75820 626 aaPredicted RBP10.19□□□□□ -0.78
CDH23-203ENST00000398788 PSMC4P43686 418 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 PLCD1P51178 756 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 DYNC1I2Q13409 638 aaKnown RBP10.19□□□□□ -0.78
CDH23-203ENST00000398788 NONOQ15233 471 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDH23-203ENST00000398788 MAP7D1Q3KQU3 841 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 RAD9BQ6WBX8 426 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 BZW1Q7L1Q6 419 aaKnown RBP10.19□□□□□ -0.78
CDH23-203ENST00000398788 SDCCAG8Q86SQ7 713 aaPredicted RBP10.19□□□□□ -0.78
CDH23-203ENST00000398788 ZBTB38Q8NAP3 1195 aaPredicted RBP10.19□□□□□ -0.78
CDH23-203ENST00000398788 HAUS4Q9H6D7 363 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 ZNF185O15231 689 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 MDH1P40925 334 aaKnown RBP10.19□□□□□ -0.78
CDH23-203ENST00000398788 POSTNQ15063 836 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 CCNI2Q6ZMN8 369 aaPredicted RBP10.19□□□□□ -0.78
CDH23-203ENST00000398788 CCDC155Q8N6L0 562 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 TC2NQ8N9U0 490 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 MLKLQ8NB16 471 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 MTRQ99707 1265 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 SEC31BQ9NQW1 1179 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 NOVA2Q9UNW9 492 aaKnown RBP10.19□□□□□ -0.78
CDH23-203ENST00000398788 KIF24Q5T7B8 1368 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 PPLO60437 1756 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 PHF20L1A8MW92 1017 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 PPFIA2O75334 1257 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 CYP21A2P08686 494 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 SCTRP47872 440 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 PPARAQ07869 468 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 DRP2Q13474 957 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 SPATA21Q7Z572 469 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 SNRNP27Q8WVK2 155 aaKnown RBP10.19□□□□□ -0.78
CDH23-203ENST00000398788 GPKOWQ92917 476 aaPredicted RBP eCLIP10.19□□□□□ -0.78
CDH23-203ENST00000398788 KIFC2Q96AC6 838 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 ELAC2Q9BQ52 826 aaKnown RBP10.19□□□□□ -0.78
CDH23-203ENST00000398788 TRIM10Q9UDY6 481 aa10.19□□□□□ -0.78
CDH23-203ENST00000398788 ADGRL3Q9HAR2 1447 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 MAP3K15Q6ZN16 1313 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 MROH5Q6ZUA9 1318 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 SYNRGQ9UMZ2 1314 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 PPIP5K2O43314 1243 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 ATP6V1G2O95670 118 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 ATP1A1P05023 1023 aaKnown RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 PCCAP05165 728 aaPredicted RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 SCNN1BP51168 640 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 PTGISQ16647 500 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 SH2D4BQ5SQS7 431 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 ANKRD13CQ8N6S4 541 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 ARHGEF2Q92974 986 aaKnown RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDH23-203ENST00000398788 KCNK9Q9NPC2 374 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms