RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 DMP1Q13316 513 aaPredicted RBP15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 TRIM50Q86XT4 487 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 IFT20Q8IY31 132 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 PCDHA1Q9Y5I3 950 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 NAA25Q14CX7 972 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 HHATQ5VTY9 493 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 TMEM179Q6ZVK1 233 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 M0R2C6 588 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 SH3RF3Q8TEJ3 882 aaPredicted RBP15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 LACTBP83111 547 aaPredicted RBP15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 RYBPQ8N488 228 aaPredicted RBP15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 TBC1D16Q8TBP0 767 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 NOC2LQ9Y3T9 749 aaKnown RBP15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 KDM3AQ9Y4C1 1321 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 TMEM191BP0C7N4 346 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 KRT15P19012 456 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 SATB1Q01826 763 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 CYP4A11Q02928 519 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 ME3Q16798 604 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 USP17L2Q6R6M4 530 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 KSR1Q8IVT5 923 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 TAB3Q8N5C8 712 aaPredicted RBP15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 AFAP1L1Q8TED9 768 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 SKA2Q8WVK7 121 aaPredicted RBP15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 NT5C3AQ9H0P0 336 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 NBPF26B4DH59 902 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 TLR3O15455 904 aaKnown RBP15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 ZNF75DP51815 510 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 PTH1RQ03431 593 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 ERCC6LQ2NKX8 1250 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 ZMYM1Q5SVZ6 1142 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 NBPF10Q6P3W6 841 aaKnown RBP15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 NBPF15Q8N660 670 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 HOXC10Q9NYD6 342 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 PCDHA12Q9UN75 941 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 GTF2A1P52655 376 aaPredicted RBP15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 SLC12A2P55011 1212 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 NEDD9Q14511 834 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 RPS6KA1Q15418 735 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 AFAP1L2Q8N4X5 818 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 MGARPQ8TDB4 240 aa15.62■□□□□ 0.09
PCDHA11-201ENST00000398640 ADKP55263 362 aaKnown RBP15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 LONRF2Q1L5Z9 754 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 FASTKD5Q7L8L6 764 aaKnown RBP15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 STAM2O75886 525 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 FOSP01100 380 aaPredicted RBP15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 IGKV5-2P06315 115 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 ZSCAN20P17040 1043 aaPredicted RBP15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 PI16Q6UXB8 463 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 RSAD2Q8WXG1 361 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 GH2P01242 217 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 TMED8Q6PL24 325 aaPredicted RBP15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 BLIDQ8IZY5 108 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 CACYBPQ9HB71 228 aaKnown RBP15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 SLC16A2P36021 539 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 SLFN12Q8IYM2 578 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 NLRP7Q8WX94 980 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 GOLGA6CA6NDK9 693 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 GOLGA6BA6NDN3 693 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 MYL3P08590 195 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 GOLGA6DP0CG33 693 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 KRBA2Q6ZNG9 492 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 SYCE1Q8N0S2 351 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 DYNLL2Q96FJ2 89 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 PIH1D3Q9NQM4 214 aaKnown RBP15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 PANK4Q9NVE7 773 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 GOLGA6AQ9NYA3 693 aa15.61■□□□□ 0.09
PCDHA11-201ENST00000398640 LRRC7Q96NW7 1537 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 CDK8P49336 464 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 PPFIBP2Q8ND30 876 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 ANTXR1Q9H6X2 564 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 STRIP1Q5VSL9 837 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 ARHGEF2Q92974 986 aaKnown RBP15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 CCDC127Q96BQ5 260 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 GDAP1L1Q96MZ0 367 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 CELF2O95319 508 aaKnown RBP15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 MFSD14CQ5VZR4 134 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 CTAGE3PQ8IX95 158 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 FANCBQ8NB91 859 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 RAET1EQ8TD07 263 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 FTOQ9C0B1 505 aaKnown RBP eCLIP15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 ELP3Q9H9T3 547 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 IFNB1P01574 187 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 XRCC5P13010 732 aaKnown RBP15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 PIK3CAP42336 1068 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 PLCB4Q15147 1175 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 TMCO4Q5TGY1 634 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 REREQ9P2R6 1566 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 PRKAB2O43741 272 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 GMPSP49915 693 aaPredicted RBP15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 SCARF1Q14162 830 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 ELF2Q15723 593 aa15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 IFIH1Q9BYX4 1025 aaKnown RBP15.6■□□□□ 0.09
PCDHA11-201ENST00000398640 MROH7-TTC4A0A0A0MT08 1334 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 TFDP1Q14186 410 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 RSBN1LQ6PCB5 846 aaPredicted RBP15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 CAPN12Q6ZSI9 719 aa15.59■□□□□ 0.09
PCDHA11-201ENST00000398640 NME8Q8N427 588 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms