RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 DUSP28Q4G0W2 176 aa16.46■□□□□ 0.23
HDDC2-202ENST00000398153 ANO1Q5XXA6 986 aa16.46■□□□□ 0.23
HDDC2-202ENST00000398153 PPP1R18Q6NYC8 613 aa16.46■□□□□ 0.23
HDDC2-202ENST00000398153 RAB11FIP4Q86YS3 637 aa16.46■□□□□ 0.23
HDDC2-202ENST00000398153 PCSK9Q8NBP7 692 aaKnown RBP16.46■□□□□ 0.23
HDDC2-202ENST00000398153 IL27Q8NEV9 243 aa16.46■□□□□ 0.23
HDDC2-202ENST00000398153 DIS3LQ8TF46 1054 aaKnown RBP16.46■□□□□ 0.23
HDDC2-202ENST00000398153 SCFD2Q8WU76 684 aa16.46■□□□□ 0.23
HDDC2-202ENST00000398153 UPF3BQ9BZI7 483 aaKnown RBP16.46■□□□□ 0.23
HDDC2-202ENST00000398153 PXMP2Q9NR77 195 aa16.46■□□□□ 0.23
HDDC2-202ENST00000398153 COL20A1Q9P218 1284 aa16.46■□□□□ 0.23
HDDC2-202ENST00000398153 GNEQ9Y223 722 aaKnown RBP16.46■□□□□ 0.23
HDDC2-202ENST00000398153 MOXD2PA6NHM9 499 aa16.45■□□□□ 0.22
HDDC2-202ENST00000398153 STAM2O75886 525 aa16.45■□□□□ 0.22
HDDC2-202ENST00000398153 NR3C2P08235 984 aa16.45■□□□□ 0.22
HDDC2-202ENST00000398153 GJC2Q5T442 439 aaPredicted RBP16.45■□□□□ 0.22
HDDC2-202ENST00000398153 FBXO16Q8IX29 292 aaPredicted RBP16.45■□□□□ 0.22
HDDC2-202ENST00000398153 KLHDC9Q8NEP7 349 aa16.45■□□□□ 0.22
HDDC2-202ENST00000398153 PIBF1Q8WXW3 757 aa16.45■□□□□ 0.22
HDDC2-202ENST00000398153 DPF3Q92784 378 aa16.45■□□□□ 0.22
HDDC2-202ENST00000398153 PSTPIP2Q9H939 334 aa16.45■□□□□ 0.22
HDDC2-202ENST00000398153 PHF24Q9UPV7 400 aa16.45■□□□□ 0.22
HDDC2-202ENST00000398153 NR2E3Q9Y5X4 410 aa16.45■□□□□ 0.22
HDDC2-202ENST00000398153 V9GY48 417 aaPredicted RBP16.45■□□□□ 0.22
HDDC2-202ENST00000398153 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
HDDC2-202ENST00000398153 PRPF3O43395 683 aaKnown RBP16.44■□□□□ 0.22
HDDC2-202ENST00000398153 SEC24BO95487 1268 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 PGK1P00558 417 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 IFNAR1P17181 557 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 ADCYAP1R1P41586 468 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 TTLL4Q14679 1199 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 C1orf53Q5VUE5 145 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 XRRA1Q6P2D8 792 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 KCNV1Q6PIU1 500 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 EEPD1Q7L9B9 569 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 VSIG10LQ86VR7 867 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 SMARCC2Q8TAQ2 1214 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 PDCD2LQ9BRP1 358 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 RNF26Q9BY78 433 aaPredicted RBP16.44■□□□□ 0.22
HDDC2-202ENST00000398153 WDR11Q9BZH6 1224 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 SENP6Q9GZR1 1112 aaPredicted RBP16.44■□□□□ 0.22
HDDC2-202ENST00000398153 AP5M1Q9H0R1 490 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 BARHL2Q9NY43 387 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 FRMPD4Q14CM0 1322 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 PDE4DIPQ5VU43 2346 aa16.44■□□□□ 0.22
HDDC2-202ENST00000398153 MEIS2O14770 477 aa16.43■□□□□ 0.22
HDDC2-202ENST00000398153 EVI5O60447 810 aa16.43■□□□□ 0.22
HDDC2-202ENST00000398153 C6orf222P0C671 652 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-202ENST00000398153 SMPD1P17405 629 aa16.43■□□□□ 0.22
HDDC2-202ENST00000398153 HOXA13P31271 388 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-202ENST00000398153 AKAP17AQ02040 695 aaKnown RBP16.43■□□□□ 0.22
HDDC2-202ENST00000398153 PGM5Q15124 567 aa16.43■□□□□ 0.22
HDDC2-202ENST00000398153 NTRK3Q16288 839 aa16.43■□□□□ 0.22
HDDC2-202ENST00000398153 PFKFB3Q16875 520 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-202ENST00000398153 PRPF38BQ5VTL8 546 aaKnown RBP16.43■□□□□ 0.22
HDDC2-202ENST00000398153 CCSAPQ6IQ19 270 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-202ENST00000398153 CPLX2Q6PUV4 134 aaKnown RBP16.43■□□□□ 0.22
HDDC2-202ENST00000398153 NOL8Q76FK4 1167 aaKnown RBP16.43■□□□□ 0.22
HDDC2-202ENST00000398153 HEATR3Q7Z4Q2 680 aa16.43■□□□□ 0.22
HDDC2-202ENST00000398153 TLK2Q86UE8 772 aa16.43■□□□□ 0.22
HDDC2-202ENST00000398153 CCDC12Q8WUD4 166 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-202ENST00000398153 PDGFCQ9NRA1 345 aa16.43■□□□□ 0.22
HDDC2-202ENST00000398153 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.42■□□□□ 0.22
HDDC2-202ENST00000398153 ADCY6O43306 1168 aa16.42■□□□□ 0.22
HDDC2-202ENST00000398153 ZEB2O60315 1214 aa16.42■□□□□ 0.22
HDDC2-202ENST00000398153 TGFB3P10600 412 aa16.42■□□□□ 0.22
HDDC2-202ENST00000398153 SCG2P13521 617 aa16.42■□□□□ 0.22
HDDC2-202ENST00000398153 EIF2AK2P19525 551 aaKnown RBP16.42■□□□□ 0.22
HDDC2-202ENST00000398153 CCND2P30279 289 aa16.42■□□□□ 0.22
HDDC2-202ENST00000398153 BRDTQ58F21 947 aaPredicted RBP16.42■□□□□ 0.22
HDDC2-202ENST00000398153 GNASQ5JWF2 1037 aa16.42■□□□□ 0.22
HDDC2-202ENST00000398153 MCTP2Q6DN12 878 aa16.42■□□□□ 0.22
HDDC2-202ENST00000398153 FAM177A1Q8N128 213 aaPredicted RBP16.42■□□□□ 0.22
HDDC2-202ENST00000398153 SEZ6LQ9BYH1 1024 aa16.42■□□□□ 0.22
HDDC2-202ENST00000398153 KIAA1217Q5T5P2 1943 aa16.42■□□□□ 0.22
HDDC2-202ENST00000398153 ELP1O95163 1332 aa16.42■□□□□ 0.22
HDDC2-202ENST00000398153 CPLX1O14810 134 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 CABYRO75952 493 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 FOSP01100 380 aaPredicted RBP16.41■□□□□ 0.22
HDDC2-202ENST00000398153 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
HDDC2-202ENST00000398153 TXNP10599 105 aaKnown RBP16.41■□□□□ 0.22
HDDC2-202ENST00000398153 ACLYP53396 1101 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 NAPAP54920 295 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 SNX17Q15036 470 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 KCNA10Q16322 511 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 WWC2Q6AWC2 1192 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 CCDC62Q6P9F0 684 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 USP17L6PQ6QN14 398 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 SLC39A5Q6ZMH5 540 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 FCHSD1Q86WN1 690 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 TRIM22Q8IYM9 498 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 EHMT1Q9H9B1 1298 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 UPF2Q9HAU5 1272 aaKnown RBP16.41■□□□□ 0.22
HDDC2-202ENST00000398153 RIC8AQ9NPQ8 531 aa16.41■□□□□ 0.22
HDDC2-202ENST00000398153 A0A1W2PQ45 241 aaPredicted RBP16.4■□□□□ 0.22
HDDC2-202ENST00000398153 A0A1W2PQY0 241 aa16.4■□□□□ 0.22
HDDC2-202ENST00000398153 hCG_1642624A0A1W2PR95 340 aa16.4■□□□□ 0.22
HDDC2-202ENST00000398153 ESYT2A0FGR8 921 aa16.4■□□□□ 0.22
HDDC2-202ENST00000398153 SPDYE3A6NKU9 549 aa16.4■□□□□ 0.22
HDDC2-202ENST00000398153 STXBP3O00186 592 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms