RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 JMJD4Q9H9V9 463 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 LARSQ9P2J5 1176 aaKnown RBP6.55□□□□□ -1.36
PTPRD-206ENST00000397617 TRAF3IP3Q9Y228 551 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 CHGBP05060 677 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 ZNF131P52739 623 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 SUPT20HL1Q3ZLR7 823 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 CFAP100Q494V2 611 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 CEP55Q53EZ4 464 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 CHST3Q7LGC8 479 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 PTF1AQ7RTS3 328 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 SYMPKQ92797 1274 aaKnown RBP6.55□□□□□ -1.36
PTPRD-206ENST00000397617 SENP7Q9BQF6 1050 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 CSRNP2Q9H175 543 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 PPP2R5AQ15172 486 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 CIAPIN1Q6FI81 312 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 LARGE2Q8N3Y3 721 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 GOLPH3LQ9H4A5 285 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 PLEKHA8P1O95397 391 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 CCDC175P0C221 793 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 TGFB3P10600 412 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 PTPN14Q15678 1187 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 MEA1Q16626 185 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 PAGE5Q96GU1 130 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 SLC16A3O15427 465 aaKnown RBP6.55□□□□□ -1.36
PTPRD-206ENST00000397617 NDUFB10O96000 172 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 CALCRLQ16602 461 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 TTI2Q6NXR4 508 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 PAXIP1Q6ZW49 1069 aaPredicted RBP6.55□□□□□ -1.36
PTPRD-206ENST00000397617 CCDC186Q7Z3E2 898 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 PPFIBP1Q86W92 1011 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 FBXO11Q86XK2 927 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 LCMT1Q9UIC8 334 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 PCDHA12Q9UN75 941 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 MYH11P35749 1972 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 STAT2P52630 851 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 KRT76Q01546 638 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 IQCEQ6IPM2 695 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 LUZP1Q86V48 1076 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 ERO1AQ96HE7 468 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 INTUQ9ULD6 942 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 KLRK1P26718 216 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 KCNV1Q6PIU1 500 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 DHX40Q8IX18 779 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 MPHOSPH6Q99547 160 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 ANO3Q9BYT9 981 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 USP20Q9Y2K6 914 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 A6NNZ2 444 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 AKR1B1P15121 316 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 FKBP1BP68106 108 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 TUBB8Q3ZCM7 444 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 GBP3Q9H0R5 595 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 MAN2A1Q16706 1144 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 ZCWPW2Q504Y3 356 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 FKBP15Q5T1M5 1219 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 ANKEF1Q9NU02 776 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 PGAP2Q9UHJ9 254 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 SIPA1L1O43166 1804 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 N4BP1O75113 896 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 SERPINC1P01008 464 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 PPP2R5CQ13362 524 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 DALRD3Q5D0E6 543 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 AOPEPQ8N6M6 819 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 TSG101Q99816 390 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 JPH2Q9BR39 696 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 RANBP17Q9H2T7 1088 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 ZCCHC17Q9NP64 241 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 TCEAL9Q9UHQ7 104 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 PCDHA6Q9UN73 950 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 PCDHA8Q9Y5H6 950 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 RPLP2P05387 115 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 CALRP27797 417 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 CYLC1P35663 651 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 CAP2P40123 477 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 QRICH1Q2TAL8 776 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 APTXQ7Z2E3 356 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 NACC1Q96RE7 527 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 XPO4Q9C0E2 1151 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 ZBTB21Q9ULJ3 1066 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 LUC7L2Q9Y383 392 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 TACC3Q9Y6A5 838 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 FZD9O00144 591 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 RPN1P04843 607 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 GUCY2CP25092 1073 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 ARHGAP4P98171 946 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 SH3D19Q5HYK7 790 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 FAM26FQ5R3K3 315 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 ZNF397Q8NF99 534 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 CDK5RAP3Q96JB5 506 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 HSD17B14Q9BPX1 270 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 TTC12Q9H892 705 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 COL4A1P02462 1669 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 P2RX5Q93086 422 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 CSRNP1Q96S65 589 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 HSD3B7Q9H2F3 369 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 DNAI1Q9UI46 699 aa6.54□□□□□ -1.36
PTPRD-206ENST00000397617 DBR1Q9UK59 544 aaKnown RBP6.54□□□□□ -1.36
PTPRD-206ENST00000397617 SMAP1Q8IYB5 467 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-206ENST00000397617 EXOC1Q9NV70 894 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 MAGEC2Q9UBF1 373 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-206ENST00000397617 MARCKSP29966 332 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms