RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 NAPBQ9H115 298 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 A1CFQ9NQ94 594 aaKnown RBP10.38□□□□□ -0.75
CAPN3-208ENST00000397204 RNF146Q9NTX7 359 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 TTC41PQ6P2S7 1318 aa10.37□□□□□ -0.75
CAPN3-208ENST00000397204 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-208ENST00000397204 ALAS1P13196 640 aa10.37□□□□□ -0.75
CAPN3-208ENST00000397204 BEX3Q00994 111 aa10.37□□□□□ -0.75
CAPN3-208ENST00000397204 PPARAQ07869 468 aa10.37□□□□□ -0.75
CAPN3-208ENST00000397204 C20orf194Q5TEA3 1177 aa10.37□□□□□ -0.75
CAPN3-208ENST00000397204 TAPT1Q6NXT6 567 aa10.37□□□□□ -0.75
CAPN3-208ENST00000397204 USP38Q8NB14 1042 aa10.37□□□□□ -0.75
CAPN3-208ENST00000397204 SEC62Q99442 399 aaKnown RBP10.37□□□□□ -0.75
CAPN3-208ENST00000397204 HIPK3Q9H422 1215 aa10.37□□□□□ -0.75
CAPN3-208ENST00000397204 PRDM12Q9H4Q4 367 aa10.37□□□□□ -0.75
CAPN3-208ENST00000397204 ISY1Q9ULR0 285 aaKnown RBP10.37□□□□□ -0.75
CAPN3-208ENST00000397204 COL11A1P12107 1806 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-208ENST00000397204 PARP14Q460N5 1801 aa10.37□□□□□ -0.75
CAPN3-208ENST00000397204 PLIN4Q96Q06 1357 aa10.37□□□□□ -0.75
CAPN3-208ENST00000397204 MYH8P13535 1937 aa10.37□□□□□ -0.75
CAPN3-208ENST00000397204 ASTN1O14525 1302 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 GRIN2DO15399 1336 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 LOC102724159A0A0B4J2E5 919 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 TNFRSF10AO00220 468 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 SMPD1P17405 629 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 PWP2Q15269 919 aaKnown RBP10.36□□□□□ -0.75
CAPN3-208ENST00000397204 ZMYM1Q5SVZ6 1142 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 TSHZ3Q63HK5 1081 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 TLK2Q86UE8 772 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 MORC4Q8TE76 937 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 SLC28A3Q9HAS3 691 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 VTA1Q9NP79 307 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 IL17RBQ9NRM6 502 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 CYP39A1Q9NYL5 469 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 ADD3Q9UEY8 706 aaKnown RBP10.36□□□□□ -0.75
CAPN3-208ENST00000397204 PRR12Q9ULL5 1215 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 STX8Q9UNK0 236 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 PLXNA1Q9UIW2 1896 aa10.36□□□□□ -0.75
CAPN3-208ENST00000397204 TSPY2A6NKD2 308 aa10.35□□□□□ -0.75
CAPN3-208ENST00000397204 SUPT20HL2P0C7V6 817 aa10.35□□□□□ -0.75
CAPN3-208ENST00000397204 NOVP48745 357 aa10.35□□□□□ -0.75
CAPN3-208ENST00000397204 MRPS5P82675 430 aaKnown RBP10.35□□□□□ -0.75
CAPN3-208ENST00000397204 KIAA1211Q6ZU35 1233 aa10.35□□□□□ -0.75
CAPN3-208ENST00000397204 KCTD1Q719H9 257 aa10.35□□□□□ -0.75
CAPN3-208ENST00000397204 PI4K2BQ8TCG2 481 aa10.35□□□□□ -0.75
CAPN3-208ENST00000397204 ASB2Q96Q27 587 aa10.35□□□□□ -0.75
CAPN3-208ENST00000397204 FSD1Q9BTV5 496 aa10.35□□□□□ -0.75
CAPN3-208ENST00000397204 NOC4LQ9BVI4 516 aaKnown RBP10.35□□□□□ -0.75
CAPN3-208ENST00000397204 TRPV6Q9H1D0 765 aa10.35□□□□□ -0.75
CAPN3-208ENST00000397204 PDGFCQ9NRA1 345 aa10.35□□□□□ -0.75
CAPN3-208ENST00000397204 CXXC1Q9P0U4 656 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-208ENST00000397204 ANAPC4Q9UJX5 808 aa10.35□□□□□ -0.75
CAPN3-208ENST00000397204 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
CAPN3-208ENST00000397204 SLC4A7Q9Y6M7 1214 aa10.35□□□□□ -0.75
CAPN3-208ENST00000397204 GREB1LQ9C091 1923 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-208ENST00000397204 RANBP6O60518 1105 aaKnown RBP10.34□□□□□ -0.75
CAPN3-208ENST00000397204 ICAM1P05362 532 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 IGFBP4P22692 258 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 CCL23P55773 120 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 ADGRE1Q14246 886 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 ALX1Q15699 326 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 DUSP28Q4G0W2 176 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 MUM1L1Q5H9M0 696 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 BTNL9Q6UXG8 535 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 NSMFQ6X4W1 530 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 OTOP2Q7RTS6 562 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 DCAF4Q8WV16 495 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 PPM1EQ8WY54 764 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 POLR3EQ9NVU0 708 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 THEGQ9P2T0 379 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 PNMA2Q9UL42 364 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 CCPG1Q9ULG6 757 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 PCDHA11Q9Y5I1 949 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 TRANK1O15050 2925 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 XIRP2A4UGR9 3374 aa10.34□□□□□ -0.75
CAPN3-208ENST00000397204 RBM47A0AV96 593 aaKnown RBP10.33□□□□□ -0.76
CAPN3-208ENST00000397204 ORC4O43929 436 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 B4GALT4O60513 344 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 KPNA6O60684 536 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 PFKMP08237 780 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 FGRP09769 529 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 CPT1AP50416 773 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 SNAP25P60880 206 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 CTDSPL2Q05D32 466 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 BAATQ14032 418 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-208ENST00000397204 BRDTQ58F21 947 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-208ENST00000397204 EEPD1Q7L9B9 569 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 TICAM2Q86XR7 235 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 CHMP4CQ96CF2 233 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 WDR11Q9BZH6 1224 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 WNT8AQ9H1J5 351 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 ALDH8A1Q9H2A2 487 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-208ENST00000397204 RANBP17Q9H2T7 1088 aaKnown RBP10.33□□□□□ -0.76
CAPN3-208ENST00000397204 NKX2-4Q9H2Z4 354 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 INCENPQ9NQS7 918 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 TCP11L1Q9NUJ3 509 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 YBX2Q9Y2T7 364 aaKnown RBP10.33□□□□□ -0.76
CAPN3-208ENST00000397204 UMODL1Q5DID0 1318 aa10.33□□□□□ -0.76
CAPN3-208ENST00000397204 GPR37O15354 613 aa10.32□□□□□ -0.76
CAPN3-208ENST00000397204 FOXP2O15409 715 aa10.32□□□□□ -0.76
CAPN3-208ENST00000397204 NMT2O60551 498 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms