RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 ISY1Q9ULR0 285 aaKnown RBP10.01□□□□□ -0.81
SCFD1-202ENST00000396629 RAD50Q92878 1312 aa10.01□□□□□ -0.81
SCFD1-202ENST00000396629 POTEB3A0JP26 581 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 GPAA1O43292 621 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 PARNO95453 639 aaKnown RBP10□□□□□ -0.81
SCFD1-202ENST00000396629 CXCL10P02778 98 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 IL9P15248 144 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 DEFB103AP81534 67 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 PDE4BQ07343 736 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 RBL2Q08999 1139 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 PUS10Q3MIT2 529 aaKnown RBP10□□□□□ -0.81
SCFD1-202ENST00000396629 PPP4R3BQ5MIZ7 849 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 CNKSR3Q6P9H4 555 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 POTEBQ6S5H4 581 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 TMCO2Q7Z6W1 182 aaPredicted RBP10□□□□□ -0.81
SCFD1-202ENST00000396629 IFNL3Q8IZI9 196 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 CTAGE1Q96RT6 745 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 ZBED2Q9BTP6 218 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 RANBP17Q9H2T7 1088 aaKnown RBP10□□□□□ -0.81
SCFD1-202ENST00000396629 LINC01553A4QN01 128 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 RNF113AO15541 343 aaKnown RBP10□□□□□ -0.81
SCFD1-202ENST00000396629 GJB5O95377 273 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 KCNA5P22460 613 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 EDNRBP24530 442 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 PPP2R5BQ15173 497 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 PTCRAQ6ISU1 281 aaPredicted RBP10□□□□□ -0.81
SCFD1-202ENST00000396629 SESTD1Q86VW0 696 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 ZBTB40Q9NUA8 1239 aa10□□□□□ -0.81
SCFD1-202ENST00000396629 ABHD14A-ACY1A0A1B0GW23 586 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 M0R2C6 588 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 NFIBO00712 420 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 SELPP16109 830 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 SSTR3P32745 418 aaPredicted RBP9.99□□□□□ -0.81
SCFD1-202ENST00000396629 PTGISQ16647 500 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 TCTN1Q2MV58 587 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 BTNL9Q6UXG8 535 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 NEK9Q8TD19 979 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 SCFD2Q8WU76 684 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 DHX38Q92620 1227 aaKnown RBP9.99□□□□□ -0.81
SCFD1-202ENST00000396629 COPS5Q92905 334 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 CHMP4CQ96CF2 233 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 FBXL18Q96ME1 805 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 NOD1Q9Y239 953 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 KIAA1217Q5T5P2 1943 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 MICAL3Q7RTP6 2002 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 DCXO43602 365 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 NBNO60934 754 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 EFCAB14O75071 495 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 APPP05067 770 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 ZFYP08048 801 aaPredicted RBP9.99□□□□□ -0.81
SCFD1-202ENST00000396629 NOVP48745 357 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 CSPP1Q1MSJ5 1256 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 GDF6Q6KF10 455 aaPredicted RBP9.99□□□□□ -0.81
SCFD1-202ENST00000396629 LRRC8DQ7L1W4 858 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 RASGRP2Q7LDG7 609 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 CLEC4DQ8WXI8 215 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 UIMC1Q96RL1 719 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 IL17RBQ9NRM6 502 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 ECHDC1Q9NTX5 307 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 MTUS1Q9ULD2 1270 aa9.99□□□□□ -0.81
SCFD1-202ENST00000396629 NLRC5Q86WI3 1866 aa9.98□□□□□ -0.81
SCFD1-202ENST00000396629 PTPDC1A2A3K4 754 aa9.98□□□□□ -0.81
SCFD1-202ENST00000396629 SLC3A2P08195 630 aaKnown RBP9.98□□□□□ -0.81
SCFD1-202ENST00000396629 PPARAQ07869 468 aa9.98□□□□□ -0.81
SCFD1-202ENST00000396629 PDE4DQ08499 809 aa9.98□□□□□ -0.81
SCFD1-202ENST00000396629 SLC30A10Q6XR72 485 aa9.98□□□□□ -0.81
SCFD1-202ENST00000396629 DNERQ8NFT8 737 aa9.98□□□□□ -0.81
SCFD1-202ENST00000396629 DCAF4Q8WV16 495 aa9.98□□□□□ -0.81
SCFD1-202ENST00000396629 SNX27Q96L92 541 aa9.98□□□□□ -0.81
SCFD1-202ENST00000396629 LRRCC1Q9C099 1032 aa9.98□□□□□ -0.81
SCFD1-202ENST00000396629 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.98□□□□□ -0.81
SCFD1-202ENST00000396629 ZNF318Q5VUA4 2279 aa9.98□□□□□ -0.81
SCFD1-202ENST00000396629 C19orf67A6NJJ6 358 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 ARIH2O95376 493 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 TXNP10599 105 aaKnown RBP9.97□□□□□ -0.81
SCFD1-202ENST00000396629 MS4A1P11836 297 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 CKBP12277 381 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 SYDE2Q5VT97 1194 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 TTBK2Q6IQ55 1244 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 FBXO22Q8NEZ5 403 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 KAT2BQ92831 832 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 MRPL38Q96DV4 380 aaKnown RBP9.97□□□□□ -0.81
SCFD1-202ENST00000396629 MPHOSPH6Q99547 160 aaKnown RBP9.97□□□□□ -0.81
SCFD1-202ENST00000396629 NACAP1Q9BZK3 213 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 STX8Q9UNK0 236 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 MYH7BA7E2Y1 1941 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 ATG2AQ2TAZ0 1938 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 RALGAPA2Q2PPJ7 1873 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 SMARCA5O60264 1052 aaPredicted RBP9.97□□□□□ -0.81
SCFD1-202ENST00000396629 CALML3P27482 149 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 IKBKEQ14164 716 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 COL19A1Q14993 1142 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 CCDC62Q6P9F0 684 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 TRAF7Q6Q0C0 670 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 RNF207Q6ZRF8 634 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 C17orf80Q9BSJ5 609 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 PRKAG3Q9UGI9 489 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 CTNNA3Q9UI47 895 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 PNMA2Q9UL42 364 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms