RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 PDE6BP35913 854 aa14.83□□□□□ -0.04
TRIM40-207ENST00000396581 KLK7P49862 253 aa14.83□□□□□ -0.04
TRIM40-207ENST00000396581 SP8Q8IXZ3 490 aa14.83□□□□□ -0.04
TRIM40-207ENST00000396581 CNOT6LQ96LI5 555 aaKnown RBP14.83□□□□□ -0.04
TRIM40-207ENST00000396581 AK8Q96MA6 479 aa14.83□□□□□ -0.04
TRIM40-207ENST00000396581 C7orf25Q9BPX7 421 aa14.83□□□□□ -0.04
TRIM40-207ENST00000396581 SH2D4AQ9H788 454 aa14.83□□□□□ -0.04
TRIM40-207ENST00000396581 A0A087WUV0 522 aaPredicted RBP14.82□□□□□ -0.04
TRIM40-207ENST00000396581 NPR1P16066 1061 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 UBA7P41226 1012 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 IRAK1P51617 712 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 C2orf54Q08AI8 447 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 PPFIA1Q13136 1202 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 ANKRD40Q6AI12 368 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 CCDC70Q6NSX1 233 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 GSPT2Q8IYD1 628 aaKnown RBP14.82□□□□□ -0.04
TRIM40-207ENST00000396581 CAGE1Q8TC20 777 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 KAT14Q9H8E8 782 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 ATP8A2Q9NTI2 1148 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 GGA1Q9UJY5 639 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 PCDHA6Q9UN73 950 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 PCDHA8Q9Y5H6 950 aa14.82□□□□□ -0.04
TRIM40-207ENST00000396581 GOLGA6CA6NDK9 693 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 PP2D1A8MPX8 630 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 GOLGA8KD6RF30 607 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 GOLGA6DP0CG33 693 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 TYW1BQ6NUM6 668 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 DGKHQ86XP1 1220 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 NSUN4Q96CB9 384 aaKnown RBP14.81□□□□□ -0.04
TRIM40-207ENST00000396581 ZFP91Q96JP5 570 aaPredicted RBP14.81□□□□□ -0.04
TRIM40-207ENST00000396581 TRIM9Q9C026 710 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 JADE2Q9NQC1 790 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 GOLGA6AQ9NYA3 693 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 ARPP21Q9UBL0 812 aaPredicted RBP14.81□□□□□ -0.04
TRIM40-207ENST00000396581 ANKRD31Q8N7Z5 1873 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 PES1O00541 588 aaKnown RBP14.81□□□□□ -0.04
TRIM40-207ENST00000396581 USO1O60763 962 aaKnown RBP14.81□□□□□ -0.04
TRIM40-207ENST00000396581 TACC1O75410 805 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 UFL1O94874 794 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 CLSTN1O94985 981 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 TCP1P17987 556 aaKnown RBP14.81□□□□□ -0.04
TRIM40-207ENST00000396581 ALDH1B1P30837 517 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 CYP27A1Q02318 531 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 EVX2Q03828 476 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 FAM47AQ5JRC9 791 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 ICE2Q659A1 982 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.81□□□□□ -0.04
TRIM40-207ENST00000396581 ZNF804AQ7Z570 1209 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 TADA2BQ86TJ2 420 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 SPATA4Q8NEY3 305 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 CAVIN3Q969G5 261 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 CCDC42Q96M95 316 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 STK32BQ9NY57 414 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 LRWD1Q9UFC0 647 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 ATP6V0A2Q9Y487 856 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 CAPN6Q9Y6Q1 641 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 GRIN2DO15399 1336 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 ABCB11O95342 1321 aa14.81□□□□□ -0.04
TRIM40-207ENST00000396581 CCDC194A0A1B0GVG4 234 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 MACROD2A1Z1Q3 448 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 SKOR1P84550 965 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 SPA17Q15506 151 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 MSL1Q68DK7 614 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 EMBQ6PCB8 327 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 TBC1D16Q8TBP0 767 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 WDR66Q8TBY9 1149 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 GDAP1L1Q96MZ0 367 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 NOC4LQ9BVI4 516 aaKnown RBP14.8□□□□□ -0.04
TRIM40-207ENST00000396581 ARHGAP20Q9P2F6 1191 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 POLLQ9UGP5 575 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 DMGDHQ9UI17 866 aaKnown RBP14.8□□□□□ -0.04
TRIM40-207ENST00000396581 SIK3Q9Y2K2 1263 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 A6NNZ2 444 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 PPEF1O14829 653 aaPredicted RBP14.8□□□□□ -0.04
TRIM40-207ENST00000396581 PJA2O43164 708 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 GNAQP50148 359 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 EPHB4P54760 987 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 MECOMQ03112 1051 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 STK4Q13043 487 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 GRM4Q14833 912 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 TUBB8Q3ZCM7 444 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 ALS2CLQ60I27 953 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 CENPPQ6IPU0 288 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 CCDC155Q8N6L0 562 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 MASTLQ96GX5 879 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 LRRC1Q9BTT6 524 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 PLEKHA4Q9H4M7 779 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 PCDHA13Q9Y5I0 950 aa14.8□□□□□ -0.04
TRIM40-207ENST00000396581 EIF3HO15372 352 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRIM40-207ENST00000396581 IL1R1P14778 569 aa14.79□□□□□ -0.04
TRIM40-207ENST00000396581 PLCG1P19174 1290 aa14.79□□□□□ -0.04
TRIM40-207ENST00000396581 PRDX5P30044 214 aa14.79□□□□□ -0.04
TRIM40-207ENST00000396581 PDE4DQ08499 809 aa14.79□□□□□ -0.04
TRIM40-207ENST00000396581 NNTQ13423 1086 aa14.79□□□□□ -0.04
TRIM40-207ENST00000396581 FKBP15Q5T1M5 1219 aa14.79□□□□□ -0.04
TRIM40-207ENST00000396581 SPTY2D1Q68D10 685 aaPredicted RBP14.79□□□□□ -0.04
TRIM40-207ENST00000396581 SUGP1Q8IWZ8 645 aaKnown RBP14.79□□□□□ -0.04
TRIM40-207ENST00000396581 RASGRP4Q8TDF6 673 aa14.79□□□□□ -0.04
TRIM40-207ENST00000396581 HDAC7Q8WUI4 952 aa14.79□□□□□ -0.04
TRIM40-207ENST00000396581 GPKOWQ92917 476 aaPredicted RBP eCLIP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms