RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CCDC51Q96ER9 411 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 THAP9Q9H5L6 903 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 TCP11X2Q5H9J9 407 aa18.07■□□□□ 0.48
SNX6-202ENST00000396526 CIAPIN1Q6FI81 312 aa18.07■□□□□ 0.48
SNX6-202ENST00000396526 BTNL9Q6UXG8 535 aa18.07■□□□□ 0.48
SNX6-202ENST00000396526 ERMNQ8TAM6 284 aa18.07■□□□□ 0.48
SNX6-202ENST00000396526 ATF5Q9Y2D1 282 aaPredicted RBP18.07■□□□□ 0.48
SNX6-202ENST00000396526 ZBTB12Q9Y330 459 aaPredicted RBP18.07■□□□□ 0.48
SNX6-202ENST00000396526 RIOK3O14730 519 aaKnown RBP18.07■□□□□ 0.48
SNX6-202ENST00000396526 COPB1P53618 953 aaKnown RBP18.07■□□□□ 0.48
SNX6-202ENST00000396526 KRT31Q15323 416 aa18.07■□□□□ 0.48
SNX6-202ENST00000396526 TSR1Q2NL82 804 aaKnown RBP18.07■□□□□ 0.48
SNX6-202ENST00000396526 E4F1Q66K89 784 aaPredicted RBP18.07■□□□□ 0.48
SNX6-202ENST00000396526 NYAP1Q6ZVC0 841 aa18.07■□□□□ 0.48
SNX6-202ENST00000396526 MTMR14Q8NCE2 650 aa18.07■□□□□ 0.48
SNX6-202ENST00000396526 CCNE1P24864 410 aa18.07■□□□□ 0.48
SNX6-202ENST00000396526 GTF2F1P35269 517 aaKnown RBP eCLIP18.07■□□□□ 0.48
SNX6-202ENST00000396526 ZNF76P36508 570 aa18.07■□□□□ 0.48
SNX6-202ENST00000396526 CCT6AP40227 531 aaKnown RBP18.07■□□□□ 0.48
SNX6-202ENST00000396526 USH1GQ495M9 461 aa18.07■□□□□ 0.48
SNX6-202ENST00000396526 PANX2Q96RD6 677 aa18.07■□□□□ 0.48
SNX6-202ENST00000396526 NUP88Q99567 741 aaPredicted RBP18.07■□□□□ 0.48
SNX6-202ENST00000396526 PDGFDQ9GZP0 370 aaPredicted RBP18.07■□□□□ 0.48
SNX6-202ENST00000396526 TMX1Q9H3N1 280 aa18.07■□□□□ 0.48
SNX6-202ENST00000396526 KLRC4O43908 158 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 CSGALNACT2Q8N6G5 542 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 MAP7D2Q96T17 732 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 MMTAG2Q9BU76 263 aaKnown RBP18.06■□□□□ 0.48
SNX6-202ENST00000396526 VPS16Q9H269 839 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 TAOK3Q9H2K8 898 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 EHMT1Q9H9B1 1298 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 TMX2Q9Y320 296 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 MYH4Q9Y623 1939 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 TBC1D12O60347 775 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 IDEP14735 1019 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 HAUS3Q68CZ6 603 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 PPP1R13BQ96KQ4 1090 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 SRRTQ9BXP5 876 aaKnown RBP18.06■□□□□ 0.48
SNX6-202ENST00000396526 ITIH6Q6UXX5 1313 aa18.06■□□□□ 0.48
SNX6-202ENST00000396526 POTEMA6NI47 508 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 USP27XA6NNY8 438 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 ADKP55263 362 aaKnown RBP18.05■□□□□ 0.48
SNX6-202ENST00000396526 GRB10Q13322 594 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 TNFAIP1Q13829 316 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 UNC13DQ70J99 1090 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 P2RX5Q93086 422 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 ZBTB21Q9ULJ3 1066 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 TEX33O43247 280 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 ARHGAP4P98171 946 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 PSMD2Q13200 908 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 SHROOM1Q2M3G4 852 aaPredicted RBP18.05■□□□□ 0.48
SNX6-202ENST00000396526 RAD54LQ92698 747 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 TBX3O15119 743 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 MCM6Q14566 821 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 SPICE1Q8N0Z3 855 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 TC2NQ8N9U0 490 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 CPLX3Q8WVH0 158 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 TAB2Q9NYJ8 693 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 PRR12Q9ULL5 1215 aa18.05■□□□□ 0.48
SNX6-202ENST00000396526 ADAMTSL1Q8N6G6 1762 aa18.04■□□□□ 0.48
SNX6-202ENST00000396526 KIF20AO95235 890 aa18.04■□□□□ 0.48
SNX6-202ENST00000396526 ASNSP08243 561 aa18.04■□□□□ 0.48
SNX6-202ENST00000396526 KCNA3P22001 575 aa18.04■□□□□ 0.48
SNX6-202ENST00000396526 UBXN1Q04323 297 aa18.04■□□□□ 0.48
SNX6-202ENST00000396526 FAM160B2Q86V87 743 aa18.04■□□□□ 0.48
SNX6-202ENST00000396526 CYP3A7-CYP3A51PA0A087WV96 503 aa18.04■□□□□ 0.48
SNX6-202ENST00000396526 CYP3A7P24462 503 aa18.04■□□□□ 0.48
SNX6-202ENST00000396526 CXCL9Q07325 125 aa18.04■□□□□ 0.48
SNX6-202ENST00000396526 SSBP05455 408 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNX6-202ENST00000396526 PTPN21Q16825 1174 aa18.04■□□□□ 0.48
SNX6-202ENST00000396526 APTXQ7Z2E3 356 aaKnown RBP18.03■□□□□ 0.48
SNX6-202ENST00000396526 FAM20AQ96MK3 541 aa18.03■□□□□ 0.48
SNX6-202ENST00000396526 TSG101Q99816 390 aa18.03■□□□□ 0.48
SNX6-202ENST00000396526 PPP1R1BQ9UD71 204 aaPredicted RBP18.03■□□□□ 0.48
SNX6-202ENST00000396526 GREB1LQ9C091 1923 aaPredicted RBP18.03■□□□□ 0.48
SNX6-202ENST00000396526 PNMA5Q96PV4 448 aa18.03■□□□□ 0.48
SNX6-202ENST00000396526 FEZ1Q99689 392 aa18.03■□□□□ 0.48
SNX6-202ENST00000396526 MRPL11Q9Y3B7 192 aaKnown RBP18.03■□□□□ 0.48
SNX6-202ENST00000396526 MEIS2O14770 477 aa18.02■□□□□ 0.48
SNX6-202ENST00000396526 PRKCSHP14314 528 aaPredicted RBP18.02■□□□□ 0.48
SNX6-202ENST00000396526 DNM2P50570 870 aa18.02■□□□□ 0.48
SNX6-202ENST00000396526 COBLL1Q53SF7 1204 aa18.02■□□□□ 0.48
SNX6-202ENST00000396526 PRR16Q569H4 304 aa18.02■□□□□ 0.48
SNX6-202ENST00000396526 DYMQ7RTS9 669 aa18.02■□□□□ 0.48
SNX6-202ENST00000396526 HAS1Q92839 578 aa18.02■□□□□ 0.48
SNX6-202ENST00000396526 VCPKMTQ9H867 229 aa18.02■□□□□ 0.48
SNX6-202ENST00000396526 BLOC1S4Q9NUP1 217 aa18.02■□□□□ 0.48
SNX6-202ENST00000396526 A0A1W2PRG0 241 aa18.02■□□□□ 0.48
SNX6-202ENST00000396526 COBLO75128 1261 aa18.02■□□□□ 0.48
SNX6-202ENST00000396526 KRT18P05783 430 aaKnown RBP18.02■□□□□ 0.48
SNX6-202ENST00000396526 MTIF2P46199 727 aaKnown RBP18.02■□□□□ 0.48
SNX6-202ENST00000396526 RBL2Q08999 1139 aa18.02■□□□□ 0.48
SNX6-202ENST00000396526 CCDC65Q8IXS2 484 aa18.02■□□□□ 0.48
SNX6-202ENST00000396526 ETF1P62495 437 aaKnown RBP18.02■□□□□ 0.47
SNX6-202ENST00000396526 TMEM119Q4V9L6 283 aa18.02■□□□□ 0.47
SNX6-202ENST00000396526 CCDC125Q86Z20 511 aa18.02■□□□□ 0.47
SNX6-202ENST00000396526 TRIM49BA6NDI0 452 aa18.01■□□□□ 0.47
SNX6-202ENST00000396526 CCDC175P0C221 793 aa18.01■□□□□ 0.47
SNX6-202ENST00000396526 SNAP25P60880 206 aa18.01■□□□□ 0.47
SNX6-202ENST00000396526 GOLGA8FQ08AF8 430 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms