RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SAP30BPQ9UHR5 308 aaKnown RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 ARHGEF37A1IGU5 675 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 SLU7O95391 586 aaKnown RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 RSBN1LQ6PCB5 846 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 CTNNBL1Q8WYA6 563 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 TBC1D7Q9P0N9 293 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 V9GYY5 206 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 C5P01031 1676 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF75DP51815 510 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 VAV2P52735 878 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 FANCCQ00597 558 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 KCNJ14Q9UNX9 436 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 JAG2Q9Y219 1238 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 MYO5AQ9Y4I1 1855 aaKnown RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 P4HA1P13674 534 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 PLS1Q14651 629 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 SURF1Q15526 300 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 NAALADL2Q58DX5 795 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 CABP7Q86V35 215 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 CCDC155Q8N6L0 562 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 KIFC2Q96AC6 838 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 CSRNP2Q9H175 543 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 LRRC8AQ8IWT6 810 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF341Q9BYN7 854 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 CBX8Q9HC52 389 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF215Q9UL58 517 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 PDHBP11177 359 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF219Q9P2Y4 722 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 DAGLAQ9Y4D2 1042 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 GAKO14976 1311 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 A0A1W2PQC6 194 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 C21orf2O43822 256 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 LMNB1P20700 586 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 KIAA0753Q2KHM9 967 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 TBC1D10CQ8IV04 446 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 SYNE4Q8N205 404 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 BICD1Q96G01 975 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 SCLT1Q96NL6 688 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 TJP1Q07157 1748 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 LOC102724159A0A0B4J2E5 919 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 ETF1P62495 437 aaKnown RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 PWP2Q15269 919 aaKnown RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 WDR44Q5JSH3 913 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 SLFN12LQ6IEE8 588 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 FAM173BQ6P4H8 233 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 ARMC9Q7Z3E5 817 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 CPXCR1Q8N123 301 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 LRRC47Q8N1G4 583 aaKnown RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 NSUN6Q8TEA1 469 aaKnown RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 LRRC45Q96CN5 670 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 CEP63Q96MT8 703 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 NCAPGQ9BPX3 1015 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 MYL10Q9BUA6 226 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 COL16A1Q07092 1604 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 WDR64B1ANS9 1081 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 URI1O94763 535 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 LIG1P18858 919 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 FAM193AP78312 1265 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 NR5A1Q13285 461 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 NEDD9Q14511 834 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 COG2Q14746 738 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 EDRF1Q3B7T1 1238 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 SMAP1Q8IYB5 467 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 FMR1NBQ8N0W7 255 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 MTUS1Q9ULD2 1270 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 SHTN1A0MZ66 631 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 CTAGE15A4D2H0 777 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 PRKAB2O43741 272 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 CTNND1O60716 968 aaKnown RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 CTAGE8P0CG41 777 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 MATR3P43243 847 aaKnown RBP eCLIP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 PRR16Q569H4 304 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 ARHGEF16Q5VV41 709 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 CTAGE6Q86UF2 777 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 CTAGE4Q8IX94 777 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 FAM107BQ9H098 131 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 HAUS2Q9NVX0 235 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 GJA3Q9Y6H8 435 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 ABCA3Q99758 1704 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 TCRBV5S4A2TA0A5A2 114 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 INTS8Q75QN2 995 aaKnown RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 FBXO41Q8TF61 875 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 ROBO3Q96MS0 1386 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 LDHAP00338 332 aaKnown RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 OAZ1P54368 228 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF543Q08ER8 600 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 USP17L2Q6R6M4 530 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 UNC13DQ70J99 1090 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 ARFGAP2Q8N6H7 521 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 MKL1Q969V6 931 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 TRIM11Q96F44 468 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 TUBGCP2Q9BSJ2 902 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 MMRN2Q9H8L6 949 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 KIAA1024Q9UPX6 916 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 PPME1Q9Y570 386 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 KLRG2A4D1S0 409 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 MAN2A1Q16706 1144 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 GMCL1P1Q8NEA9 526 aa3.74□□□□□ -1.81
VPS13C-203ENST00000395896 GPHNQ9NQX3 736 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-203ENST00000395896 PFASO15067 1338 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms