RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 CYP2C18P33260 490 aa18.85■□□□□ 0.61
CXCL12-206ENST00000395795 SMAD3P84022 425 aaKnown RBP18.85■□□□□ 0.61
CXCL12-206ENST00000395795 NCOA7Q8NI08 942 aa18.85■□□□□ 0.61
CXCL12-206ENST00000395795 SCFD2Q8WU76 684 aa18.85■□□□□ 0.61
CXCL12-206ENST00000395795 NOC4LQ9BVI4 516 aaKnown RBP18.85■□□□□ 0.61
CXCL12-206ENST00000395795 PPP1R12CQ9BZL4 782 aa18.85■□□□□ 0.61
CXCL12-206ENST00000395795 MRPL11Q9Y3B7 192 aaKnown RBP18.85■□□□□ 0.61
CXCL12-206ENST00000395795 BAZ2BQ9UIF8 2168 aaKnown RBP18.85■□□□□ 0.61
CXCL12-206ENST00000395795 MYH6P13533 1939 aa18.84■□□□□ 0.61
CXCL12-206ENST00000395795 RGS20O76081 388 aa18.84■□□□□ 0.61
CXCL12-206ENST00000395795 OR6J1Q8NGC5 347 aa18.84■□□□□ 0.61
CXCL12-206ENST00000395795 ESYT1Q9BSJ8 1104 aa18.84■□□□□ 0.61
CXCL12-206ENST00000395795 AMNQ9BXJ7 453 aa18.84■□□□□ 0.61
CXCL12-206ENST00000395795 WNT8AQ9H1J5 351 aa18.84■□□□□ 0.61
CXCL12-206ENST00000395795 ALDH8A1Q9H2A2 487 aaPredicted RBP18.84■□□□□ 0.61
CXCL12-206ENST00000395795 NKRFO15226 690 aaKnown RBP eCLIP18.83■□□□□ 0.6
CXCL12-206ENST00000395795 ZEB2O60315 1214 aa18.83■□□□□ 0.6
CXCL12-206ENST00000395795 TXNP10599 105 aaKnown RBP18.83■□□□□ 0.6
CXCL12-206ENST00000395795 ARHGAP1Q07960 439 aa18.83■□□□□ 0.6
CXCL12-206ENST00000395795 TRDNQ13061 729 aa18.83■□□□□ 0.6
CXCL12-206ENST00000395795 PPP2R5BQ15173 497 aa18.83■□□□□ 0.6
CXCL12-206ENST00000395795 MCF2L2Q86YR7 1114 aa18.83■□□□□ 0.6
CXCL12-206ENST00000395795 NSUN6Q8TEA1 469 aaKnown RBP18.83■□□□□ 0.6
CXCL12-206ENST00000395795 PPP1R13LQ8WUF5 828 aa18.83■□□□□ 0.6
CXCL12-206ENST00000395795 RNPC3Q96LT9 517 aaKnown RBP18.83■□□□□ 0.6
CXCL12-206ENST00000395795 PIGSQ96S52 555 aa18.83■□□□□ 0.6
CXCL12-206ENST00000395795 RMDN3Q96TC7 470 aa18.83■□□□□ 0.6
CXCL12-206ENST00000395795 SEMA6BQ9H3T3 888 aa18.83■□□□□ 0.6
CXCL12-206ENST00000395795 LY9Q9HBG7 655 aa18.83■□□□□ 0.6
CXCL12-206ENST00000395795 PXMP2Q9NR77 195 aa18.83■□□□□ 0.6
CXCL12-206ENST00000395795 CDH23Q9H251 3354 aa18.82■□□□□ 0.6
CXCL12-206ENST00000395795 DHX16O60231 1041 aaKnown RBP18.82■□□□□ 0.6
CXCL12-206ENST00000395795 ACRP10323 421 aa18.82■□□□□ 0.6
CXCL12-206ENST00000395795 NECTIN1Q15223 517 aa18.82■□□□□ 0.6
CXCL12-206ENST00000395795 IL31RAQ8NI17 732 aa18.82■□□□□ 0.6
CXCL12-206ENST00000395795 FAM161BQ96MY7 647 aa18.82■□□□□ 0.6
CXCL12-206ENST00000395795 CTAGE1Q96RT6 745 aa18.82■□□□□ 0.6
CXCL12-206ENST00000395795 IWS1Q96ST2 819 aa18.82■□□□□ 0.6
CXCL12-206ENST00000395795 SEZ6LQ9BYH1 1024 aa18.82■□□□□ 0.6
CXCL12-206ENST00000395795 TRMT13Q9NUP7 481 aaKnown RBP18.82■□□□□ 0.6
CXCL12-206ENST00000395795 POLR3EQ9NVU0 708 aa18.82■□□□□ 0.6
CXCL12-206ENST00000395795 PCDHA1Q9Y5I3 950 aa18.82■□□□□ 0.6
CXCL12-206ENST00000395795 KIAA1217Q5T5P2 1943 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 SLC27A2O14975 620 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 TLR3O15455 904 aaKnown RBP18.81■□□□□ 0.6
CXCL12-206ENST00000395795 CFBP00751 764 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 NR3C2P08235 984 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 MYL3P08590 195 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 EIF2AK2P19525 551 aaKnown RBP18.81■□□□□ 0.6
CXCL12-206ENST00000395795 CPT1AP50416 773 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 PPIGQ13427 754 aaKnown RBP eCLIP18.81■□□□□ 0.6
CXCL12-206ENST00000395795 TTLL4Q14679 1199 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 WTAPQ15007 396 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 LY6KQ17RY6 165 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 TMEM67Q5HYA8 995 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 ZNF365Q70YC5 407 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 RALYLQ86SE5 291 aaKnown RBP18.81■□□□□ 0.6
CXCL12-206ENST00000395795 KAT2BQ92831 832 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 PDCD2LQ9BRP1 358 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 MTG1Q9BT17 334 aaPredicted RBP18.81■□□□□ 0.6
CXCL12-206ENST00000395795 HIPK3Q9H422 1215 aa18.81■□□□□ 0.6
CXCL12-206ENST00000395795 DDX41Q9UJV9 622 aaKnown RBP18.81■□□□□ 0.6
CXCL12-206ENST00000395795 HOXA13P31271 388 aaPredicted RBP18.8■□□□□ 0.6
CXCL12-206ENST00000395795 NBPF20Q3BBV1 942 aa18.8■□□□□ 0.6
CXCL12-206ENST00000395795 BMP2KLQ5H9B9 411 aa18.8■□□□□ 0.6
CXCL12-206ENST00000395795 SEPT14Q6ZU15 432 aa18.8■□□□□ 0.6
CXCL12-206ENST00000395795 AFG1LQ8WV93 481 aa18.8■□□□□ 0.6
CXCL12-206ENST00000395795 MYL10Q9BUA6 226 aa18.8■□□□□ 0.6
CXCL12-206ENST00000395795 IL23AQ9NPF7 189 aa18.8■□□□□ 0.6
CXCL12-206ENST00000395795 CXXC1Q9P0U4 656 aaPredicted RBP18.8■□□□□ 0.6
CXCL12-206ENST00000395795 PNMA6FA0A0J9YX94 578 aa18.79■□□□□ 0.6
CXCL12-206ENST00000395795 SH2B2O14492 632 aaPredicted RBP18.79■□□□□ 0.6
CXCL12-206ENST00000395795 MMP3P08254 477 aa18.79■□□□□ 0.6
CXCL12-206ENST00000395795 CYP2C9P11712 490 aa18.79■□□□□ 0.6
CXCL12-206ENST00000395795 STXBP2Q15833 593 aa18.79■□□□□ 0.6
CXCL12-206ENST00000395795 ZNF697Q5TEC3 545 aa18.79■□□□□ 0.6
CXCL12-206ENST00000395795 CREB3L3Q68CJ9 461 aa18.79■□□□□ 0.6
CXCL12-206ENST00000395795 HOMER1Q86YM7 354 aa18.79■□□□□ 0.6
CXCL12-206ENST00000395795 TMEM199Q8N511 208 aa18.79■□□□□ 0.6
CXCL12-206ENST00000395795 MAP3K14Q99558 947 aa18.79■□□□□ 0.6
CXCL12-206ENST00000395795 CDX2Q99626 313 aaPredicted RBP18.79■□□□□ 0.6
CXCL12-206ENST00000395795 MTA3Q9BTC8 594 aa18.79■□□□□ 0.6
CXCL12-206ENST00000395795 GRXCR1A8MXD5 290 aa18.78■□□□□ 0.6
CXCL12-206ENST00000395795 RBAK-RBAKDNI3L0D1 243 aa18.78■□□□□ 0.6
CXCL12-206ENST00000395795 EIF3JO75822 258 aaKnown RBP18.78■□□□□ 0.6
CXCL12-206ENST00000395795 HOXD8P13378 290 aaPredicted RBP18.78■□□□□ 0.6
CXCL12-206ENST00000395795 CCL23P55773 120 aa18.78■□□□□ 0.6
CXCL12-206ENST00000395795 ARHGEF16Q5VV41 709 aa18.78■□□□□ 0.6
CXCL12-206ENST00000395795 CENPQQ7L2Z9 268 aaPredicted RBP18.78■□□□□ 0.6
CXCL12-206ENST00000395795 VSIG10LQ86VR7 867 aa18.78■□□□□ 0.6
CXCL12-206ENST00000395795 ZNF654Q8IZM8 581 aa18.78■□□□□ 0.6
CXCL12-206ENST00000395795 HERVK_113Q902F9 699 aa18.78■□□□□ 0.6
CXCL12-206ENST00000395795 EMID1Q96A84 441 aaPredicted RBP18.78■□□□□ 0.6
CXCL12-206ENST00000395795 MPHOSPH6Q99547 160 aaKnown RBP18.78■□□□□ 0.6
CXCL12-206ENST00000395795 MAP3K20Q9NYL2 800 aaKnown RBP18.78■□□□□ 0.6
CXCL12-206ENST00000395795 FRMPD4Q14CM0 1322 aa18.77■□□□□ 0.6
CXCL12-206ENST00000395795 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.77■□□□□ 0.6
CXCL12-206ENST00000395795 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.77■□□□□ 0.6
CXCL12-206ENST00000395795 B4DLN1 442 aa18.77■□□□□ 0.6
CXCL12-206ENST00000395795 PRC1O43663 620 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms