RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 EIF2AK2P19525 551 aaKnown RBP19.06■□□□□ 0.64
CXCL1-201ENST00000395761 NAPAP54920 295 aa19.06■□□□□ 0.64
CXCL1-201ENST00000395761 PDE4DQ08499 809 aa19.06■□□□□ 0.64
CXCL1-201ENST00000395761 PWP2Q15269 919 aaKnown RBP19.06■□□□□ 0.64
CXCL1-201ENST00000395761 CCDC144BQ3MJ40 725 aa19.06■□□□□ 0.64
CXCL1-201ENST00000395761 ARHGEF16Q5VV41 709 aa19.06■□□□□ 0.64
CXCL1-201ENST00000395761 TAPT1Q6NXT6 567 aa19.06■□□□□ 0.64
CXCL1-201ENST00000395761 RNF26Q9BY78 433 aaPredicted RBP19.06■□□□□ 0.64
CXCL1-201ENST00000395761 PXMP2Q9NR77 195 aa19.06■□□□□ 0.64
CXCL1-201ENST00000395761 BARHL2Q9NY43 387 aa19.06■□□□□ 0.64
CXCL1-201ENST00000395761 FAM184BQ9ULE4 1060 aa19.06■□□□□ 0.64
CXCL1-201ENST00000395761 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.05■□□□□ 0.64
CXCL1-201ENST00000395761 PIK3CDO00329 1044 aa19.05■□□□□ 0.64
CXCL1-201ENST00000395761 MSCO60682 206 aa19.05■□□□□ 0.64
CXCL1-201ENST00000395761 AKR1A1P14550 325 aa19.05■□□□□ 0.64
CXCL1-201ENST00000395761 MNX1P50219 401 aaPredicted RBP19.05■□□□□ 0.64
CXCL1-201ENST00000395761 AKAP17AQ02040 695 aaKnown RBP19.05■□□□□ 0.64
CXCL1-201ENST00000395761 SSRP1Q08945 709 aaKnown RBP19.05■□□□□ 0.64
CXCL1-201ENST00000395761 RABEP1Q15276 862 aa19.05■□□□□ 0.64
CXCL1-201ENST00000395761 UBE2SQ16763 222 aa19.05■□□□□ 0.64
CXCL1-201ENST00000395761 TMEM63BQ5T3F8 832 aa19.05■□□□□ 0.64
CXCL1-201ENST00000395761 SMARCC2Q8TAQ2 1214 aa19.05■□□□□ 0.64
CXCL1-201ENST00000395761 CTDNEP1O95476 244 aa19.04■□□□□ 0.64
CXCL1-201ENST00000395761 NR3C2P08235 984 aa19.04■□□□□ 0.64
CXCL1-201ENST00000395761 PTGS1P23219 599 aa19.04■□□□□ 0.64
CXCL1-201ENST00000395761 ADCYAP1R1P41586 468 aa19.04■□□□□ 0.64
CXCL1-201ENST00000395761 IL31RAQ8NI17 732 aa19.04■□□□□ 0.64
CXCL1-201ENST00000395761 DIS3LQ8TF46 1054 aaKnown RBP19.04■□□□□ 0.64
CXCL1-201ENST00000395761 CUL5Q93034 780 aa19.04■□□□□ 0.64
CXCL1-201ENST00000395761 IWS1Q96ST2 819 aa19.04■□□□□ 0.64
CXCL1-201ENST00000395761 PDCD2LQ9BRP1 358 aa19.04■□□□□ 0.64
CXCL1-201ENST00000395761 VTA1Q9NP79 307 aa19.04■□□□□ 0.64
CXCL1-201ENST00000395761 RBM27Q9P2N5 1060 aaKnown RBP19.04■□□□□ 0.64
CXCL1-201ENST00000395761 LIMCH1Q9UPQ0 1083 aa19.04■□□□□ 0.64
CXCL1-201ENST00000395761 SMCO2A6NFE2 343 aa19.03■□□□□ 0.64
CXCL1-201ENST00000395761 B4DLN1 442 aa19.03■□□□□ 0.64
CXCL1-201ENST00000395761 hCG_1984214I3L0E3 225 aa19.03■□□□□ 0.64
CXCL1-201ENST00000395761 FARP2O94887 1054 aaPredicted RBP19.03■□□□□ 0.64
CXCL1-201ENST00000395761 RARBP10826 455 aa19.03■□□□□ 0.64
CXCL1-201ENST00000395761 MRPL12P52815 198 aaKnown RBP19.03■□□□□ 0.64
CXCL1-201ENST00000395761 PPP1R18Q6NYC8 613 aa19.03■□□□□ 0.64
CXCL1-201ENST00000395761 UBE2Q1Q7Z7E8 422 aa19.03■□□□□ 0.64
CXCL1-201ENST00000395761 TRIM22Q8IYM9 498 aa19.03■□□□□ 0.64
CXCL1-201ENST00000395761 ZNF713Q8N859 430 aaPredicted RBP19.03■□□□□ 0.64
CXCL1-201ENST00000395761 GTF3C6Q969F1 213 aa19.03■□□□□ 0.64
CXCL1-201ENST00000395761 ZFP91Q96JP5 570 aaPredicted RBP19.03■□□□□ 0.64
CXCL1-201ENST00000395761 MPHOSPH6Q99547 160 aaKnown RBP19.03■□□□□ 0.64
CXCL1-201ENST00000395761 RIC8AQ9NPQ8 531 aa19.03■□□□□ 0.64
CXCL1-201ENST00000395761 ADAMTS3O15072 1205 aa19.02■□□□□ 0.64
CXCL1-201ENST00000395761 PGK1P00558 417 aa19.02■□□□□ 0.64
CXCL1-201ENST00000395761 MYCLP12524 364 aaPredicted RBP19.02■□□□□ 0.64
CXCL1-201ENST00000395761 SMPD1P17405 629 aa19.02■□□□□ 0.64
CXCL1-201ENST00000395761 TNFAIP2Q03169 654 aa19.02■□□□□ 0.64
CXCL1-201ENST00000395761 ST3GAL1Q11201 340 aa19.02■□□□□ 0.64
CXCL1-201ENST00000395761 PGM5Q15124 567 aa19.02■□□□□ 0.64
CXCL1-201ENST00000395761 STXBP2Q15833 593 aa19.02■□□□□ 0.64
CXCL1-201ENST00000395761 GJC2Q5T442 439 aaPredicted RBP19.02■□□□□ 0.64
CXCL1-201ENST00000395761 CPLX2Q6PUV4 134 aaKnown RBP19.02■□□□□ 0.64
CXCL1-201ENST00000395761 PAWRQ96IZ0 340 aaKnown RBP19.02■□□□□ 0.64
CXCL1-201ENST00000395761 AIFM3Q96NN9 605 aa19.02■□□□□ 0.64
CXCL1-201ENST00000395761 XPNPEP3Q9NQH7 507 aa19.02■□□□□ 0.64
CXCL1-201ENST00000395761 LRRC37A2A6NM11 1700 aa19.02■□□□□ 0.63
CXCL1-201ENST00000395761 RBM47A0AV96 593 aaKnown RBP19.01■□□□□ 0.63
CXCL1-201ENST00000395761 DUSP11O75319 330 aaKnown RBP19.01■□□□□ 0.63
CXCL1-201ENST00000395761 MYCNP04198 464 aaPredicted RBP19.01■□□□□ 0.63
CXCL1-201ENST00000395761 CAPN2P17655 700 aa19.01■□□□□ 0.63
CXCL1-201ENST00000395761 ADCY7P51828 1080 aa19.01■□□□□ 0.63
CXCL1-201ENST00000395761 IRX5P78411 483 aaPredicted RBP19.01■□□□□ 0.63
CXCL1-201ENST00000395761 IQSEC1Q6DN90 963 aa19.01■□□□□ 0.63
CXCL1-201ENST00000395761 SEPT14Q6ZU15 432 aa19.01■□□□□ 0.63
CXCL1-201ENST00000395761 VSIG10LQ86VR7 867 aa19.01■□□□□ 0.63
CXCL1-201ENST00000395761 ANKLE1Q8NAG6 615 aa19.01■□□□□ 0.63
CXCL1-201ENST00000395761 VPS54Q9P1Q0 977 aa19.01■□□□□ 0.63
CXCL1-201ENST00000395761 EIF3JO75822 258 aaKnown RBP19■□□□□ 0.63
CXCL1-201ENST00000395761 CDKL5O76039 1030 aa19■□□□□ 0.63
CXCL1-201ENST00000395761 DEXIO95424 95 aa19■□□□□ 0.63
CXCL1-201ENST00000395761 LRRC41Q15345 812 aa19■□□□□ 0.63
CXCL1-201ENST00000395761 ARRDC4Q8NCT1 418 aa19■□□□□ 0.63
CXCL1-201ENST00000395761 WDR11Q9BZH6 1224 aa19■□□□□ 0.63
CXCL1-201ENST00000395761 TMEM260Q9NX78 707 aa19■□□□□ 0.63
CXCL1-201ENST00000395761 PCDHA6Q9UN73 950 aa19■□□□□ 0.63
CXCL1-201ENST00000395761 GNEQ9Y223 722 aaKnown RBP19■□□□□ 0.63
CXCL1-201ENST00000395761 PCDHA8Q9Y5H6 950 aa19■□□□□ 0.63
CXCL1-201ENST00000395761 FRMPD4Q14CM0 1322 aa19■□□□□ 0.63
CXCL1-201ENST00000395761 SYNRGQ9UMZ2 1314 aa19■□□□□ 0.63
CXCL1-201ENST00000395761 MYADML2A6NDP7 307 aa18.99■□□□□ 0.63
CXCL1-201ENST00000395761 ADAMTS4O75173 837 aa18.99■□□□□ 0.63
CXCL1-201ENST00000395761 ARIH2O95376 493 aa18.99■□□□□ 0.63
CXCL1-201ENST00000395761 CD2BP2O95400 341 aaKnown RBP18.99■□□□□ 0.63
CXCL1-201ENST00000395761 FDPSP14324 419 aaKnown RBP18.99■□□□□ 0.63
CXCL1-201ENST00000395761 CCND2P30279 289 aa18.99■□□□□ 0.63
CXCL1-201ENST00000395761 PGBD1Q96JS3 809 aa18.99■□□□□ 0.63
CXCL1-201ENST00000395761 ZMYND12Q9H0C1 365 aa18.99■□□□□ 0.63
CXCL1-201ENST00000395761 FRMPD3Q5JV73 1810 aa18.99■□□□□ 0.63
CXCL1-201ENST00000395761 ESYT2A0FGR8 921 aa18.98■□□□□ 0.63
CXCL1-201ENST00000395761 JAK2O60674 1132 aa18.98■□□□□ 0.63
CXCL1-201ENST00000395761 RGS20O76081 388 aa18.98■□□□□ 0.63
CXCL1-201ENST00000395761 CLK2P49760 499 aaKnown RBP18.98■□□□□ 0.63
CXCL1-201ENST00000395761 MRPS9P82933 396 aaKnown RBP18.98■□□□□ 0.63
CXCL1-201ENST00000395761 DUSP28Q4G0W2 176 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms