RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 LEO1Q8WVC0 666 aaPredicted RBP6.74□□□□□ -1.33
CASC3-202ENST00000394114 SLC39A7Q92504 469 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 TSPAN10Q9H1Z9 355 aaPredicted RBP6.74□□□□□ -1.33
CASC3-202ENST00000394114 ZSCAN16Q9H4T2 348 aaPredicted RBP6.74□□□□□ -1.33
CASC3-202ENST00000394114 KANSL2Q9H9L4 492 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 BCS1LQ9Y276 419 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 ROBO3Q96MS0 1386 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 FAM221BA6H8Z2 402 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 GOLGA6L3A6NEY3 463 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 PSMD14O00487 310 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 CHMP4BP1P59074 171 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 TAF1CQ15572 869 aaPredicted RBP6.74□□□□□ -1.33
CASC3-202ENST00000394114 C4orf46Q504U0 113 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 DALRD3Q5D0E6 543 aaKnown RBP6.74□□□□□ -1.33
CASC3-202ENST00000394114 C16orf86Q6ZW13 317 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 TRIM22Q8IYM9 498 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 RTKN2Q8IZC4 609 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 CRACR2BQ8N4Y2 399 aaPredicted RBP6.74□□□□□ -1.33
CASC3-202ENST00000394114 SGSM3Q96HU1 749 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 RPS6KC1Q96S38 1066 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 TDRD3Q9H7E2 651 aaKnown RBP6.74□□□□□ -1.33
CASC3-202ENST00000394114 KAT14Q9H8E8 782 aa6.74□□□□□ -1.33
CASC3-202ENST00000394114 KIF13BQ9NQT8 1826 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 CCDC196A0A1B0GTZ2 297 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 GOLGA6L4A6NEF3 574 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 EIF1AYO14602 144 aaKnown RBP6.73□□□□□ -1.33
CASC3-202ENST00000394114 RNF40O75150 1001 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 GOLGA8HP0CJ92 632 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 ETFBP38117 255 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 UBE2HP62256 183 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 ORC1Q13415 861 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 TRIM29Q14134 588 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 CFAP100Q494V2 611 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 MEI1Q5TIA1 1274 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 NBPF11Q86T75 865 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 NLGN2Q8NFZ4 835 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 CTCFLQ8NI51 663 aaPredicted RBP6.73□□□□□ -1.33
CASC3-202ENST00000394114 PRMT6Q96LA8 375 aaPredicted RBP6.73□□□□□ -1.33
CASC3-202ENST00000394114 MTA3Q9BTC8 594 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 TRIM55Q9BYV6 548 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 OSBPL5Q9H0X9 879 aaPredicted RBP6.73□□□□□ -1.33
CASC3-202ENST00000394114 CPVLQ9H3G5 476 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 LRFN2Q9ULH4 789 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 CLRN2A0PK11 232 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 HMGB1P1B2RPK0 211 aaPredicted RBP6.73□□□□□ -1.33
CASC3-202ENST00000394114 MPHOSPH10O00566 681 aaKnown RBP6.73□□□□□ -1.33
CASC3-202ENST00000394114 AKR1B1P15121 316 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
CASC3-202ENST00000394114 GYS2P54840 703 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 AKAP17AQ02040 695 aaKnown RBP6.73□□□□□ -1.33
CASC3-202ENST00000394114 KIF23Q02241 960 aaPredicted RBP6.73□□□□□ -1.33
CASC3-202ENST00000394114 SHROOM1Q2M3G4 852 aaPredicted RBP6.73□□□□□ -1.33
CASC3-202ENST00000394114 STAG2Q8N3U4 1231 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 CEP95Q96GE4 821 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 ZDHHC15Q96MV8 337 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 SCAND2PQ9GZW5 306 aaPredicted RBP6.73□□□□□ -1.33
CASC3-202ENST00000394114 VPS54Q9P1Q0 977 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 SERPINB13Q9UIV8 391 aa6.73□□□□□ -1.33
CASC3-202ENST00000394114 SCAF8Q9UPN6 1271 aaKnown RBP6.73□□□□□ -1.33
CASC3-202ENST00000394114 DDTLA6NHG4 134 aaPredicted RBP6.72□□□□□ -1.33
CASC3-202ENST00000394114 OPLAHO14841 1288 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 DXOO77932 396 aaKnown RBP6.72□□□□□ -1.33
CASC3-202ENST00000394114 LIG1P18858 919 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 APLP1P51693 650 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 NIM1KQ8IY84 436 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 SRBD1Q8N5C6 995 aaKnown RBP6.72□□□□□ -1.33
CASC3-202ENST00000394114 BICD2Q8TD16 824 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 PGBD1Q96JS3 809 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 TMEM47Q9BQJ4 181 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 DNAJC25Q9H1X3 360 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 ZNF287Q9HBT7 754 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 PCDH10Q9P2E7 1040 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 CLIC4Q9Y696 253 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 SHTN1A0MZ66 631 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 BTBD18B2RXH4 712 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 DDAH1O94760 285 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 DEXIO95424 95 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 BRCA1P38398 1863 aaKnown RBP6.72□□□□□ -1.33
CASC3-202ENST00000394114 ME1P48163 572 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 TGFB2P61812 414 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 NR5A1Q13285 461 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 CAMK4Q16566 473 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 TMTC3Q6ZXV5 915 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 LRRC47Q8N1G4 583 aaKnown RBP6.72□□□□□ -1.33
CASC3-202ENST00000394114 PRPF38AQ8NAV1 312 aaKnown RBP6.72□□□□□ -1.33
CASC3-202ENST00000394114 SHISA4Q96DD7 197 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 ZNF830Q96NB3 372 aaPredicted RBP6.72□□□□□ -1.33
CASC3-202ENST00000394114 C2orf49Q9BVC5 232 aaPredicted RBP6.72□□□□□ -1.33
CASC3-202ENST00000394114 PANK2Q9BZ23 570 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 TAOK3Q9H2K8 898 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 CFAP45Q9UL16 551 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 STK36Q9NRP7 1315 aa6.72□□□□□ -1.33
CASC3-202ENST00000394114 NID2Q14112 1375 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 TCP10L2B9ZVM9 353 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 BACH1O14867 736 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 HLA-DOAP06340 250 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 PTMAP06454 111 aaKnown RBP6.71□□□□□ -1.33
CASC3-202ENST00000394114 CALM1P0DP23 149 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 CALM2P0DP24 149 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 CALM3P0DP25 149 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms