RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 SLC28A3Q9HAS3 691 aa20.47■□□□□ 0.87
SNRPA1-202ENST00000394082 DIAPH3Q9NSV4 1193 aa20.47■□□□□ 0.87
SNRPA1-202ENST00000394082 TRMT13Q9NUP7 481 aaKnown RBP20.47■□□□□ 0.87
SNRPA1-202ENST00000394082 CTNNA3Q9UI47 895 aa20.47■□□□□ 0.87
SNRPA1-202ENST00000394082 SLC4A7Q9Y6M7 1214 aa20.47■□□□□ 0.87
SNRPA1-202ENST00000394082 KDM4AO75164 1064 aa20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 MYL3P08590 195 aa20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 TXNP10599 105 aaKnown RBP20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 NBPF20Q3BBV1 942 aa20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 TJAP1Q5JTD0 557 aa20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 CCDC62Q6P9F0 684 aa20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 CWC27Q6UX04 472 aaKnown RBP20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 MCF2L2Q86YR7 1114 aa20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 USP38Q8NB14 1042 aa20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 NSUN6Q8TEA1 469 aaKnown RBP20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 ZSCAN10Q96SZ4 725 aaPredicted RBP20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 ZKSCAN3Q9BRR0 538 aa20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 KAT14Q9H8E8 782 aa20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 PCDHA11Q9Y5I1 949 aa20.46■□□□□ 0.87
SNRPA1-202ENST00000394082 GOLGA8HP0CJ92 632 aa20.45■□□□□ 0.86
SNRPA1-202ENST00000394082 CDC37Q16543 378 aaPredicted RBP20.45■□□□□ 0.86
SNRPA1-202ENST00000394082 IMMTQ16891 758 aaKnown RBP20.45■□□□□ 0.86
SNRPA1-202ENST00000394082 USH1GQ495M9 461 aa20.45■□□□□ 0.86
SNRPA1-202ENST00000394082 B4GALNT3Q6L9W6 998 aa20.45■□□□□ 0.86
SNRPA1-202ENST00000394082 ENAHQ8N8S7 591 aaPredicted RBP20.45■□□□□ 0.86
SNRPA1-202ENST00000394082 ATXN2LQ8WWM7 1075 aaKnown RBP20.45■□□□□ 0.86
SNRPA1-202ENST00000394082 KRT23Q9C075 422 aa20.45■□□□□ 0.86
SNRPA1-202ENST00000394082 UBA5Q9GZZ9 404 aa20.45■□□□□ 0.86
SNRPA1-202ENST00000394082 PRDM12Q9H4Q4 367 aa20.45■□□□□ 0.86
SNRPA1-202ENST00000394082 CNNM2Q9H8M5 875 aa20.45■□□□□ 0.86
SNRPA1-202ENST00000394082 ZSWIM5Q9P217 1185 aa20.45■□□□□ 0.86
SNRPA1-202ENST00000394082 TTC28Q96AY4 2481 aa20.44■□□□□ 0.86
SNRPA1-202ENST00000394082 IGHDP01880 384 aa20.44■□□□□ 0.86
SNRPA1-202ENST00000394082 CYP2C9P11712 490 aa20.44■□□□□ 0.86
SNRPA1-202ENST00000394082 SESTD1Q86VW0 696 aa20.44■□□□□ 0.86
SNRPA1-202ENST00000394082 ADGRF4Q8IZF3 695 aa20.44■□□□□ 0.86
SNRPA1-202ENST00000394082 SYTL5Q8TDW5 730 aaPredicted RBP20.44■□□□□ 0.86
SNRPA1-202ENST00000394082 SCLYQ96I15 445 aa20.44■□□□□ 0.86
SNRPA1-202ENST00000394082 YBX2Q9Y2T7 364 aaKnown RBP20.44■□□□□ 0.86
SNRPA1-202ENST00000394082 MRPL11Q9Y3B7 192 aaKnown RBP20.44■□□□□ 0.86
SNRPA1-202ENST00000394082 TRANK1O15050 2925 aa20.44■□□□□ 0.86
SNRPA1-202ENST00000394082 B4E1Z4 1266 aa20.43■□□□□ 0.86
SNRPA1-202ENST00000394082 ACTN1P12814 892 aa20.43■□□□□ 0.86
SNRPA1-202ENST00000394082 ATP2A2P16615 1042 aaKnown RBP20.43■□□□□ 0.86
SNRPA1-202ENST00000394082 GHRHRQ02643 423 aa20.43■□□□□ 0.86
SNRPA1-202ENST00000394082 PHOSPHO2Q8TCD6 241 aa20.43■□□□□ 0.86
SNRPA1-202ENST00000394082 NKX2-4Q9H2Z4 354 aa20.43■□□□□ 0.86
SNRPA1-202ENST00000394082 MAP3K20Q9NYL2 800 aaKnown RBP20.43■□□□□ 0.86
SNRPA1-202ENST00000394082 GBF1Q92538 1859 aa20.42■□□□□ 0.86
SNRPA1-202ENST00000394082 ARIH2O95376 493 aa20.42■□□□□ 0.86
SNRPA1-202ENST00000394082 PARP1P09874 1014 aaKnown RBP20.42■□□□□ 0.86
SNRPA1-202ENST00000394082 IQCF3P0C7M6 154 aa20.42■□□□□ 0.86
SNRPA1-202ENST00000394082 BFSP2Q13515 415 aa20.42■□□□□ 0.86
SNRPA1-202ENST00000394082 ADGRE1Q14246 886 aa20.42■□□□□ 0.86
SNRPA1-202ENST00000394082 STXBP2Q15833 593 aa20.42■□□□□ 0.86
SNRPA1-202ENST00000394082 FAM47CQ5HY64 1035 aa20.42■□□□□ 0.86
SNRPA1-202ENST00000394082 SAMD3Q8N6K7 520 aa20.42■□□□□ 0.86
SNRPA1-202ENST00000394082 COPS5Q92905 334 aa20.42■□□□□ 0.86
SNRPA1-202ENST00000394082 EMID1Q96A84 441 aaPredicted RBP20.42■□□□□ 0.86
SNRPA1-202ENST00000394082 CPVLQ9H3G5 476 aa20.42■□□□□ 0.86
SNRPA1-202ENST00000394082 MYO9BQ13459 2157 aa20.41■□□□□ 0.86
SNRPA1-202ENST00000394082 GH1P01241 217 aa20.41■□□□□ 0.86
SNRPA1-202ENST00000394082 QRICH1Q2TAL8 776 aa20.41■□□□□ 0.86
SNRPA1-202ENST00000394082 FBXO11Q86XK2 927 aa20.41■□□□□ 0.86
SNRPA1-202ENST00000394082 RETREG2Q8NC44 543 aa20.41■□□□□ 0.86
SNRPA1-202ENST00000394082 TAAR1Q96RJ0 339 aa20.41■□□□□ 0.86
SNRPA1-202ENST00000394082 SLC9A7Q96T83 725 aa20.41■□□□□ 0.86
SNRPA1-202ENST00000394082 RMDN3Q96TC7 470 aa20.41■□□□□ 0.86
SNRPA1-202ENST00000394082 UBAC1Q9BSL1 405 aa20.41■□□□□ 0.86
SNRPA1-202ENST00000394082 JMJD4Q9H9V9 463 aa20.41■□□□□ 0.86
SNRPA1-202ENST00000394082 EIF3JO75822 258 aaKnown RBP20.4■□□□□ 0.86
SNRPA1-202ENST00000394082 PARNO95453 639 aaKnown RBP20.4■□□□□ 0.86
SNRPA1-202ENST00000394082 ARHGAP1Q07960 439 aa20.4■□□□□ 0.86
SNRPA1-202ENST00000394082 PPP2R2DQ66LE6 453 aa20.4■□□□□ 0.86
SNRPA1-202ENST00000394082 CAGE1Q8TC20 777 aa20.4■□□□□ 0.86
SNRPA1-202ENST00000394082 TBC1D5Q92609 795 aa20.4■□□□□ 0.86
SNRPA1-202ENST00000394082 MTMR8Q96EF0 704 aa20.4■□□□□ 0.86
SNRPA1-202ENST00000394082 COL20A1Q9P218 1284 aa20.4■□□□□ 0.86
SNRPA1-202ENST00000394082 THEGQ9P2T0 379 aa20.4■□□□□ 0.86
SNRPA1-202ENST00000394082 KIAA1217Q5T5P2 1943 aa20.39■□□□□ 0.86
SNRPA1-202ENST00000394082 TANC1Q9C0D5 1861 aa20.39■□□□□ 0.86
SNRPA1-202ENST00000394082 ZBBXA8MT70 800 aa20.39■□□□□ 0.85
SNRPA1-202ENST00000394082 BAIAP3O94812 1187 aa20.39■□□□□ 0.85
SNRPA1-202ENST00000394082 MMP3P08254 477 aa20.39■□□□□ 0.85
SNRPA1-202ENST00000394082 POU3F3P20264 500 aaPredicted RBP20.39■□□□□ 0.85
SNRPA1-202ENST00000394082 CASTP20810 708 aaKnown RBP20.39■□□□□ 0.85
SNRPA1-202ENST00000394082 HSD17B4P51659 736 aa20.39■□□□□ 0.85
SNRPA1-202ENST00000394082 RABGGTBP53611 331 aa20.39■□□□□ 0.85
SNRPA1-202ENST00000394082 RBL2Q08999 1139 aa20.39■□□□□ 0.85
SNRPA1-202ENST00000394082 TMEM67Q5HYA8 995 aa20.39■□□□□ 0.85
SNRPA1-202ENST00000394082 CCDC155Q8N6L0 562 aa20.39■□□□□ 0.85
SNRPA1-202ENST00000394082 AFG1LQ8WV93 481 aa20.39■□□□□ 0.85
SNRPA1-202ENST00000394082 AMNQ9BXJ7 453 aa20.39■□□□□ 0.85
SNRPA1-202ENST00000394082 XIRP2A4UGR9 3374 aa20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 REV3LO60673 3130 aa20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 TRAF1Q13077 416 aa20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 DGKDQ16760 1214 aa20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 IFIT1BQ5T764 474 aaKnown RBP20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 ARHGEF16Q5VV41 709 aa20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 SEPT14Q6ZU15 432 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms