RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 KIAA0895Q8NCT3 520 aa16.44■□□□□ 0.22
CDH16-202ENST00000394055 THAP9Q9H5L6 903 aa16.44■□□□□ 0.22
CDH16-202ENST00000394055 NKRFO15226 690 aaKnown RBP eCLIP16.43■□□□□ 0.22
CDH16-202ENST00000394055 FXR2P51116 673 aaKnown RBP eCLIP16.43■□□□□ 0.22
CDH16-202ENST00000394055 AMPD3Q01432 767 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 QRICH1Q2TAL8 776 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 FLAD1Q8NFF5 587 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 KIFC2Q96AC6 838 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 DHTKD1Q96HY7 919 aaPredicted RBP16.43■□□□□ 0.22
CDH16-202ENST00000394055 CCDC17Q96LX7 622 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 EHD4Q9H223 541 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 TTC26A0AVF1 554 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 ABL1P00519 1130 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 IDEP14735 1019 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 EEF1GP26641 437 aaKnown RBP16.43■□□□□ 0.22
CDH16-202ENST00000394055 MRPL12P52815 198 aaKnown RBP16.43■□□□□ 0.22
CDH16-202ENST00000394055 ARHGAP29Q52LW3 1261 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 SLFN13Q68D06 897 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 LARP4BQ92615 738 aaKnown RBP16.43■□□□□ 0.22
CDH16-202ENST00000394055 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 CHP1Q99653 195 aa16.43■□□□□ 0.22
CDH16-202ENST00000394055 TDRD3Q9H7E2 651 aaKnown RBP16.43■□□□□ 0.22
CDH16-202ENST00000394055 SLX4Q8IY92 1834 aa16.42■□□□□ 0.22
CDH16-202ENST00000394055 TAL1P17542 331 aaPredicted RBP16.42■□□□□ 0.22
CDH16-202ENST00000394055 CCNE1P24864 410 aa16.42■□□□□ 0.22
CDH16-202ENST00000394055 CLK2P49760 499 aaKnown RBP16.42■□□□□ 0.22
CDH16-202ENST00000394055 ORC2Q13416 577 aaPredicted RBP16.42■□□□□ 0.22
CDH16-202ENST00000394055 PPP1R18Q6NYC8 613 aa16.42■□□□□ 0.22
CDH16-202ENST00000394055 TUBGCP2Q9BSJ2 902 aa16.42■□□□□ 0.22
CDH16-202ENST00000394055 PI4KBQ9UBF8 816 aa16.42■□□□□ 0.22
CDH16-202ENST00000394055 KLK7P49862 253 aa16.42■□□□□ 0.22
CDH16-202ENST00000394055 ECM1Q16610 540 aa16.42■□□□□ 0.22
CDH16-202ENST00000394055 KRT79Q5XKE5 535 aa16.42■□□□□ 0.22
CDH16-202ENST00000394055 HAS1Q92839 578 aa16.42■□□□□ 0.22
CDH16-202ENST00000394055 CNOT6LQ96LI5 555 aaKnown RBP16.42■□□□□ 0.22
CDH16-202ENST00000394055 SLF1Q9BQI6 1058 aa16.42■□□□□ 0.22
CDH16-202ENST00000394055 PCDHA1Q9Y5I3 950 aa16.42■□□□□ 0.22
CDH16-202ENST00000394055 CHRM1P11229 460 aaPredicted RBP16.41■□□□□ 0.22
CDH16-202ENST00000394055 ICA1Q05084 483 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 UBXN4Q92575 508 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 RAB34Q9BZG1 259 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 EPC1Q9H2F5 836 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 DHX36Q9H2U1 1008 aaKnown RBP16.41■□□□□ 0.22
CDH16-202ENST00000394055 MTIF2P46199 727 aaKnown RBP16.41■□□□□ 0.22
CDH16-202ENST00000394055 CDC37Q16543 378 aaPredicted RBP16.41■□□□□ 0.22
CDH16-202ENST00000394055 CNNM4Q6P4Q7 775 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 TMTC1Q8IUR5 882 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 ZNF507Q8TCN5 953 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 SEMA6BQ9H3T3 888 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 BICDL2A1A5D9 508 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 SSBP05455 408 aaKnown RBP eCLIP16.41■□□□□ 0.22
CDH16-202ENST00000394055 ERCC3P19447 782 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 HMGB2P26583 209 aaKnown RBP16.41■□□□□ 0.22
CDH16-202ENST00000394055 IKQ13123 557 aaPredicted RBP16.41■□□□□ 0.22
CDH16-202ENST00000394055 TRIM14Q14142 442 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 CYP26C1Q6V0L0 522 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 SIAH1Q8IUQ4 282 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 MTMR8Q96EF0 704 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 KANSL2Q9H9L4 492 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 STK17AQ9UEE5 414 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 SIPA1L1O43166 1804 aa16.41■□□□□ 0.22
CDH16-202ENST00000394055 MYH7BA7E2Y1 1941 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 TADA3O75528 432 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 MAP3K9P80192 1104 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 ZNF569Q5MCW4 686 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 PPP4R3AQ6IN85 833 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 GLIS3Q8NEA6 775 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 RAD54LQ92698 747 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 PCMTD1Q96MG8 357 aaPredicted RBP16.4■□□□□ 0.22
CDH16-202ENST00000394055 GREB1LQ9C091 1923 aaPredicted RBP16.4■□□□□ 0.22
CDH16-202ENST00000394055 KIF5CO60282 957 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 FECHP22830 423 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 JAG1P78504 1218 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 LRRC41Q15345 812 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 USH1GQ495M9 461 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 IDI2Q9BXS1 227 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 LUC7L2Q9Y383 392 aaKnown RBP16.4■□□□□ 0.22
CDH16-202ENST00000394055 MRFAP1Q9Y605 127 aa16.4■□□□□ 0.22
CDH16-202ENST00000394055 PPP2R3AQ06190 1150 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 TBC1D8BQ0IIM8 1120 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 PDIA5Q14554 519 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 STYK1Q6J9G0 422 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 DDX12PQ92771 950 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 ZSWIM4Q9H7M6 989 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 PCDHA12Q9UN75 941 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 F5H6K3 240 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 BRD2P25440 801 aaKnown RBP16.39■□□□□ 0.21
CDH16-202ENST00000394055 KLRC3Q07444 240 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 ABCB5Q2M3G0 1257 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 UNC13DQ70J99 1090 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 NOC3LQ8WTT2 800 aaKnown RBP16.39■□□□□ 0.21
CDH16-202ENST00000394055 NOC4LQ9BVI4 516 aaKnown RBP16.39■□□□□ 0.21
CDH16-202ENST00000394055 AGPAT5Q9NUQ2 364 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 NYAP2Q9P242 653 aa16.39■□□□□ 0.21
CDH16-202ENST00000394055 TRIM21P19474 475 aaKnown RBP16.38■□□□□ 0.21
CDH16-202ENST00000394055 DNM2P50570 870 aa16.38■□□□□ 0.21
CDH16-202ENST00000394055 SLC20A2Q08357 652 aa16.38■□□□□ 0.21
CDH16-202ENST00000394055 OR8K1Q8NGG5 319 aa16.38■□□□□ 0.21
CDH16-202ENST00000394055 PRMT6Q96LA8 375 aaPredicted RBP16.38■□□□□ 0.21
CDH16-202ENST00000394055 C10orf71Q711Q0 1435 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms