RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SCN4AP35499 1836 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 SREBF1P36956 1147 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 PRR16Q569H4 304 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 MOB2Q70IA6 237 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 PNMA8AQ86V59 439 aaPredicted RBP9.75□□□□□ -0.85
TDP1-203ENST00000393454 CNKSR2Q8WXI2 1034 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 GJA10Q969M2 543 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 CALML4Q96GE6 196 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 C12orf42Q96LP6 360 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 CCSER1Q9C0I3 900 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 TTC12Q9H892 705 aaPredicted RBP9.75□□□□□ -0.85
TDP1-203ENST00000393454 EHMT1Q9H9B1 1298 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 DISC1Q9NRI5 854 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 CYP3A7-CYP3A51PA0A087WV96 503 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 VWA5AO00534 786 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 FDX1P10109 184 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 CYP3A7P24462 503 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 CASP1P29466 404 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 FXR2P51116 673 aaKnown RBP eCLIP9.75□□□□□ -0.85
TDP1-203ENST00000393454 UBXN2AP68543 259 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 COG2Q14746 738 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 E2F4Q16254 413 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 MCF2L2Q86YR7 1114 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 IGSF22Q8N9C0 903 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 RBM46Q8TBY0 533 aaKnown RBP9.75□□□□□ -0.85
TDP1-203ENST00000393454 CDK5RAP3Q96JB5 506 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 MAN1B1Q9UKM7 699 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 PCDHA12Q9UN75 941 aa9.75□□□□□ -0.85
TDP1-203ENST00000393454 POTEMA6NI47 508 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 NFIBO00712 420 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 DSG3P32926 999 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 PDIA5Q14554 519 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 PDXDC2PQ6P474 469 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 MOXD1Q6UVY6 613 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 GADL1Q6ZQY3 521 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 CATSPERGQ6ZRH7 1159 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 SH3RF1Q7Z6J0 888 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 TEX2Q8IWB9 1127 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 ANKRD13AQ8IZ07 590 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 AOPEPQ8N6M6 819 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 HAS1Q92839 578 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 OTUD5Q96G74 571 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 WNK4Q96J92 1243 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 CLMNQ96JQ2 1002 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 TRERF1Q96PN7 1200 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 BLZF1Q9H2G9 400 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 PNMA2Q9UL42 364 aa9.74□□□□□ -0.85
TDP1-203ENST00000393454 OTOFQ9HC10 1997 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 POTECB2RU33 542 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 ADCY5O95622 1261 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 PLCG1P19174 1290 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 IQCB1Q15051 598 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 Q4G0T1 1027 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 MUM1L1Q5H9M0 696 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 KRT79Q5XKE5 535 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 ARMC9Q7Z3E5 817 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 CRYGNQ8WXF5 182 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 CLEC4DQ8WXI8 215 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 PPP1R9BQ96SB3 815 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 ZNF408Q9H9D4 720 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 HOXC10Q9NYD6 342 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 FAM86B1E9PN63 330 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 GTPBP6O43824 516 aaPredicted RBP9.73□□□□□ -0.85
TDP1-203ENST00000393454 CYP3A4P08684 503 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 FAM86B2P0C5J1 330 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 DHX8Q14562 1220 aaKnown RBP9.73□□□□□ -0.85
TDP1-203ENST00000393454 PLS1Q14651 629 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 SH3D19Q5HYK7 790 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 ERO1BQ86YB8 467 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 DHX40Q8IX18 779 aaKnown RBP9.73□□□□□ -0.85
TDP1-203ENST00000393454 SLFN12Q8IYM2 578 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 CYP2W1Q8TAV3 490 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 SNX29Q8TEQ0 813 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 TRIM44Q96DX7 344 aaPredicted RBP9.73□□□□□ -0.85
TDP1-203ENST00000393454 MBOAT7Q96N66 472 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 KCNMB3Q9NPA1 279 aa9.73□□□□□ -0.85
TDP1-203ENST00000393454 PARP14Q460N5 1801 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 POTEIP0CG38 1075 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 POTEJP0CG39 1038 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 CIITAP33076 1130 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 SARSP49591 514 aaKnown RBP9.72□□□□□ -0.85
TDP1-203ENST00000393454 HSD17B4P51659 736 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 PPATQ06203 517 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 DPYDQ12882 1025 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 CUL4BQ13620 913 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 MORC3Q14149 939 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 NAALADL2Q58DX5 795 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 TREML2Q5T2D2 321 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 NT5DC1Q5TFE4 455 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 MAP1SQ66K74 1059 aaPredicted RBP9.72□□□□□ -0.85
TDP1-203ENST00000393454 SNRNP48Q6IEG0 339 aaKnown RBP9.72□□□□□ -0.85
TDP1-203ENST00000393454 NSMFQ6X4W1 530 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 TRIML1Q8N9V2 468 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 ZFP91Q96JP5 570 aaPredicted RBP9.72□□□□□ -0.85
TDP1-203ENST00000393454 MMTAG2Q9BU76 263 aaKnown RBP9.72□□□□□ -0.85
TDP1-203ENST00000393454 RRAGCQ9HB90 399 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 RNF146Q9NTX7 359 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 WDR90Q96KV7 1748 aa9.72□□□□□ -0.85
TDP1-203ENST00000393454 COL11A1P12107 1806 aaPredicted RBP9.72□□□□□ -0.85
TDP1-203ENST00000393454 SMTNL1A8MU46 457 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms