RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 MMP14P50281 582 aa16.01■□□□□ 0.15
MKS1-203ENST00000393120 STK4Q13043 487 aa16.01■□□□□ 0.15
MKS1-203ENST00000393120 SHROOM1Q2M3G4 852 aaPredicted RBP16.01■□□□□ 0.15
MKS1-203ENST00000393120 TOGARAM2Q6ZUX3 1019 aa16.01■□□□□ 0.15
MKS1-203ENST00000393120 ZNF507Q8TCN5 953 aa16.01■□□□□ 0.15
MKS1-203ENST00000393120 CDK5RAP3Q96JB5 506 aa16.01■□□□□ 0.15
MKS1-203ENST00000393120 TRIM47Q96LD4 638 aa16.01■□□□□ 0.15
MKS1-203ENST00000393120 AMNQ9BXJ7 453 aa16.01■□□□□ 0.15
MKS1-203ENST00000393120 MYMKA6NI61 221 aa16■□□□□ 0.15
MKS1-203ENST00000393120 C21orf2O43822 256 aa16■□□□□ 0.15
MKS1-203ENST00000393120 NDUFB10O96000 172 aa16■□□□□ 0.15
MKS1-203ENST00000393120 VIL1P09327 827 aaKnown RBP16■□□□□ 0.15
MKS1-203ENST00000393120 CCDC175P0C221 793 aa16■□□□□ 0.15
MKS1-203ENST00000393120 FXR1P51114 621 aaKnown RBP eCLIP16■□□□□ 0.15
MKS1-203ENST00000393120 RSBN1LQ6PCB5 846 aaPredicted RBP16■□□□□ 0.15
MKS1-203ENST00000393120 FOXR2Q6PJQ5 311 aa16■□□□□ 0.15
MKS1-203ENST00000393120 TMTC1Q8IUR5 882 aa16■□□□□ 0.15
MKS1-203ENST00000393120 FAM114A1Q8IWE2 563 aa16■□□□□ 0.15
MKS1-203ENST00000393120 TTLL6Q8N841 843 aa16■□□□□ 0.15
MKS1-203ENST00000393120 MB21D1Q8N884 522 aa16■□□□□ 0.15
MKS1-203ENST00000393120 CRYGNQ8WXF5 182 aa16■□□□□ 0.15
MKS1-203ENST00000393120 GMLQ99445 158 aa16■□□□□ 0.15
MKS1-203ENST00000393120 MAGEC2Q9UBF1 373 aaPredicted RBP16■□□□□ 0.15
MKS1-203ENST00000393120 DNAI1Q9UI46 699 aa16■□□□□ 0.15
MKS1-203ENST00000393120 ZNF215Q9UL58 517 aaPredicted RBP16■□□□□ 0.15
MKS1-203ENST00000393120 PCDHA12Q9UN75 941 aa16■□□□□ 0.15
MKS1-203ENST00000393120 SPDYE2BA6NHP3 402 aa16■□□□□ 0.15
MKS1-203ENST00000393120 SPDYE6P0CI01 402 aa16■□□□□ 0.15
MKS1-203ENST00000393120 UBXN1Q04323 297 aa16■□□□□ 0.15
MKS1-203ENST00000393120 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
MKS1-203ENST00000393120 PSMD2Q13200 908 aa16■□□□□ 0.15
MKS1-203ENST00000393120 MCM6Q14566 821 aa16■□□□□ 0.15
MKS1-203ENST00000393120 CENPPQ6IPU0 288 aa16■□□□□ 0.15
MKS1-203ENST00000393120 CSGALNACT2Q8N6G5 542 aa16■□□□□ 0.15
MKS1-203ENST00000393120 SNX29Q8TEQ0 813 aa16■□□□□ 0.15
MKS1-203ENST00000393120 KCNMB3Q9NPA1 279 aa16■□□□□ 0.15
MKS1-203ENST00000393120 TMOD2Q9NZR1 351 aa16■□□□□ 0.15
MKS1-203ENST00000393120 POTEMA6NI47 508 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 USP17L15C9J2P7 530 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 USP17L13C9JLJ4 530 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 USP17L11C9JVI0 530 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 USP17L18D6R9N7 530 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 USP17L22D6RA61 530 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 USP17L17D6RBQ6 530 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 USP17L19D6RCP7 530 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 USP17L20D6RJB6 530 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 MEIS2O14770 477 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 GDF11O95390 407 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 FOSP01100 380 aaPredicted RBP15.99■□□□□ 0.15
MKS1-203ENST00000393120 GH2P01242 217 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 DNM2P50570 870 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 USP17L24Q0WX57 530 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 ANKRD40Q6AI12 368 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 USP17L6PQ6QN14 398 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 CPLX3Q8WVH0 158 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 CSRNP1Q96S65 589 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 NUDT12Q9BQG2 462 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 NT5C3AQ9H0P0 336 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 ADGRG1Q9Y653 693 aa15.99■□□□□ 0.15
MKS1-203ENST00000393120 KDM3AQ9Y4C1 1321 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 SOWAHDA6NJG2 315 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 FCER1AP12319 257 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 BMP3P12645 472 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 JAG1P78504 1218 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 EHHADHQ08426 723 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 SYDE2Q5VT97 1194 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 RAD9BQ6WBX8 426 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 SLFN12Q8IYM2 578 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 KIAA0895Q8NCT3 520 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 FAM151AQ8WW52 585 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 ANO3Q9BYT9 981 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 ABHD10Q9NUJ1 306 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 TBX3O15119 743 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 TRAF1Q13077 416 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 FKBP1CQ5VVH2 108 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 FBXO11Q86XK2 927 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 GUF1Q8N442 669 aaKnown RBP15.98■□□□□ 0.15
MKS1-203ENST00000393120 RETREG2Q8NC44 543 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 HDAC9Q9UKV0 1011 aa15.98■□□□□ 0.15
MKS1-203ENST00000393120 RAD21O60216 631 aa15.97■□□□□ 0.15
MKS1-203ENST00000393120 MARCH6O60337 910 aa15.97■□□□□ 0.15
MKS1-203ENST00000393120 RRP1BQ14684 758 aaKnown RBP15.97■□□□□ 0.15
MKS1-203ENST00000393120 MTF1Q14872 753 aa15.97■□□□□ 0.15
MKS1-203ENST00000393120 CYP26C1Q6V0L0 522 aa15.97■□□□□ 0.15
MKS1-203ENST00000393120 PDCL2Q8N4E4 241 aa15.97■□□□□ 0.15
MKS1-203ENST00000393120 NUP88Q99567 741 aaPredicted RBP15.97■□□□□ 0.15
MKS1-203ENST00000393120 TUBGCP2Q9BSJ2 902 aa15.97■□□□□ 0.15
MKS1-203ENST00000393120 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.97■□□□□ 0.15
MKS1-203ENST00000393120 Q4G0T1 1027 aa15.96■□□□□ 0.15
MKS1-203ENST00000393120 MTMR14Q8NCE2 650 aa15.96■□□□□ 0.15
MKS1-203ENST00000393120 DDX12PQ92771 950 aa15.96■□□□□ 0.15
MKS1-203ENST00000393120 NUP58Q9BVL2 599 aa15.96■□□□□ 0.15
MKS1-203ENST00000393120 SEMA6BQ9H3T3 888 aa15.96■□□□□ 0.15
MKS1-203ENST00000393120 CGNQ9P2M7 1197 aaKnown RBP15.96■□□□□ 0.15
MKS1-203ENST00000393120 ZNF70Q9UC06 446 aaPredicted RBP15.96■□□□□ 0.15
MKS1-203ENST00000393120 RGS17Q9UGC6 210 aaPredicted RBP15.96■□□□□ 0.15
MKS1-203ENST00000393120 CAPN11Q9UMQ6 739 aa15.96■□□□□ 0.15
MKS1-203ENST00000393120 PSME4Q14997 1843 aa15.96■□□□□ 0.15
MKS1-203ENST00000393120 ABCB11O95342 1321 aa15.96■□□□□ 0.15
MKS1-203ENST00000393120 A0A1W2PRG0 241 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms