RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 ARL6IP4Q66PJ3 421 aaKnown RBP12.71□□□□□ -0.38
PDCD4-202ENST00000393104 EXOC1Q9NV70 894 aa12.71□□□□□ -0.38
PDCD4-202ENST00000393104 CCDC196A0A1B0GTZ2 297 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 ESYT3A0FGR9 886 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 CYTH3O43739 400 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 DNM2P50570 870 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 KCTD16Q68DU8 428 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 GPIHBP1Q8IV16 184 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 ANKRD18AQ8IVF6 992 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 CD302Q8IX05 232 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 MREGQ8N565 214 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 RUBCNQ92622 972 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 MYCBPQ99417 103 aaPredicted RBP12.7□□□□□ -0.38
PDCD4-202ENST00000393104 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 STIM2Q9P246 746 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 RBAK-RBAKDNI3L0D1 243 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 RXRBP28702 533 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 KCNMA1Q12791 1236 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 CCDC152Q4G0S7 254 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 YTHDF3Q7Z739 585 aaKnown RBP12.7□□□□□ -0.38
PDCD4-202ENST00000393104 GLIS3Q8NEA6 775 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 ZKSCAN4Q969J2 545 aaPredicted RBP12.7□□□□□ -0.38
PDCD4-202ENST00000393104 PSMB7Q99436 277 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 CD248Q9HCU0 757 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 TMC4Q7Z404 712 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 CCDC155Q8N6L0 562 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 GOLGA6L1Q8N7Z2 621 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 AKT1S1Q96B36 256 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 IL17RBQ9NRM6 502 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 RGS17Q9UGC6 210 aaPredicted RBP12.7□□□□□ -0.38
PDCD4-202ENST00000393104 SLC12A6Q9UHW9 1150 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 NIP7Q9Y221 180 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDCD4-202ENST00000393104 KIF13BQ9NQT8 1826 aa12.7□□□□□ -0.38
PDCD4-202ENST00000393104 A0A0G2JS52 829 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 GOLGA8KD6RF30 607 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 DNM1LO00429 736 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 LONP1P36776 959 aaKnown RBP12.69□□□□□ -0.38
PDCD4-202ENST00000393104 TRAPPC10P48553 1259 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 QPCTQ16769 361 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 MAP9Q49MG5 647 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 OLIG1Q8TAK6 271 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 CASKIN2Q8WXE0 1202 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 MEFVO15553 781 aaPredicted RBP12.69□□□□□ -0.38
PDCD4-202ENST00000393104 TDO2P48775 406 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 HDLBPQ00341 1268 aaKnown RBP12.69□□□□□ -0.38
PDCD4-202ENST00000393104 PPP2R5BQ15173 497 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 GBP6Q6ZN66 633 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 INPP4AQ96PE3 977 aaPredicted RBP12.69□□□□□ -0.38
PDCD4-202ENST00000393104 OSBPL7Q9BZF2 842 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 NEUROG2Q9H2A3 272 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 CXorf56Q9H5V9 222 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 KRT86O43790 486 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 KRT83P78385 493 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 CKAP4Q07065 602 aaKnown RBP12.69□□□□□ -0.38
PDCD4-202ENST00000393104 MAP3K12Q12852 859 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 PTGISQ16647 500 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 COBLL1Q53SF7 1204 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 ARHGEF1Q92888 912 aaKnown RBP12.69□□□□□ -0.38
PDCD4-202ENST00000393104 SECISBP2LQ93073 1101 aaKnown RBP12.69□□□□□ -0.38
PDCD4-202ENST00000393104 CNOT6LQ96LI5 555 aaKnown RBP12.69□□□□□ -0.38
PDCD4-202ENST00000393104 PLIN2Q99541 437 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 PCDHA6Q9UN73 950 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 IQSEC3Q9UPP2 1182 aaPredicted RBP12.69□□□□□ -0.38
PDCD4-202ENST00000393104 PCDHA8Q9Y5H6 950 aa12.69□□□□□ -0.38
PDCD4-202ENST00000393104 DDX60LQ5H9U9 1706 aaKnown RBP12.69□□□□□ -0.38
PDCD4-202ENST00000393104 GNPATO15228 680 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 SCG2P13521 617 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 ATP1A2P50993 1020 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 EHHADHQ08426 723 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 NNTQ13423 1086 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 TAF7LQ5H9L4 462 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 ALS2CLQ60I27 953 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 EMBQ6PCB8 327 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 STAG2Q8N3U4 1231 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 TRIM9Q9C026 710 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 EPN3Q9H201 632 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 MYH7BA7E2Y1 1941 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 EBAG9O00559 213 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 BMP15O95972 392 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 GNAT2P19087 354 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 MCM3P25205 808 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 EIF4A3P38919 411 aaKnown RBP12.68□□□□□ -0.38
PDCD4-202ENST00000393104 KIF11P52732 1056 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 EPHB4P54760 987 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 WLSQ5T9L3 541 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 LRRC55Q6ZSA7 311 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 C1orf131Q8NDD1 294 aaKnown RBP12.68□□□□□ -0.38
PDCD4-202ENST00000393104 CCSER1Q9C0I3 900 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 ACBD3Q9H3P7 528 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 JADE2Q9NQC1 790 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 TRAPPC3LQ5T215 181 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 TBC1D9BQ66K14 1250 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 CENPPQ6IPU0 288 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 RETREG2Q8NC44 543 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 MYCBPAPQ8TBZ2 947 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 ZNF473Q8WTR7 871 aaKnown RBP12.68□□□□□ -0.38
PDCD4-202ENST00000393104 GPKOWQ92917 476 aaPredicted RBP eCLIP12.68□□□□□ -0.38
PDCD4-202ENST00000393104 CRACR2AQ9BSW2 395 aa12.68□□□□□ -0.38
PDCD4-202ENST00000393104 CNOT8Q9UFF9 292 aaKnown RBP12.68□□□□□ -0.38
PDCD4-202ENST00000393104 NFU1Q9UMS0 254 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms