RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 MAGOHP61326 146 aaKnown RBP8.34□□□□□ -1.07
VTI1A-201ENST00000393077 PTH1RQ03431 593 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 CCDC15Q0P6D6 951 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 PDIA5Q14554 519 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 CCDC152Q4G0S7 254 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 RRAGBQ5VZM2 374 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 RAD9BQ6WBX8 426 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 TAOK1Q7L7X3 1001 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 TRIM50Q86XT4 487 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 FMR1NBQ8N0W7 255 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-201ENST00000393077 TBC1D5Q92609 795 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 MAGOHBQ96A72 148 aaKnown RBP8.34□□□□□ -1.07
VTI1A-201ENST00000393077 ABHD8Q96I13 439 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 DCAF5Q96JK2 942 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 CEP63Q96MT8 703 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 LRRC1Q9BTT6 524 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 NUB1Q9Y5A7 615 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 U3KPZ7 1027 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-201ENST00000393077 HNRNPRO43390 633 aaKnown RBP8.34□□□□□ -1.07
VTI1A-201ENST00000393077 MGRN1O60291 552 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 MBD4O95243 580 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 ATP1A1P05023 1023 aaKnown RBP8.34□□□□□ -1.07
VTI1A-201ENST00000393077 POTEJP0CG39 1038 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 CYP11B2P19099 503 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 ZNF827Q17R98 1081 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 OTUD7BQ6GQQ9 843 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 ZNF280DQ6N043 979 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 TRAPPC9Q96Q05 1148 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 SH3GL2Q99962 352 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 PLCB1Q9NQ66 1216 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.34□□□□□ -1.07
VTI1A-201ENST00000393077 ZNF148Q9UQR1 794 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 LEMD3Q9Y2U8 911 aa8.34□□□□□ -1.07
VTI1A-201ENST00000393077 SYNRGQ9UMZ2 1314 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 MFAP3LO75121 409 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 NDUFA10O95299 355 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 LMNAP02545 664 aaKnown RBP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 CXCR5P32302 372 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 STAT6P42226 847 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 PDE6CP51160 858 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 INHBEP58166 350 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 RCN1Q15293 331 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 ZNF496Q96IT1 587 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 RAB17Q9H0T7 212 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 RABL2BQ9UNT1 228 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 ADGRB1O14514 1584 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 NRXN1Q9ULB1 1477 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 GRM8O00222 908 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 NEK2P51955 445 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 EIF4A1P60842 406 aaKnown RBP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 KLC3Q6P597 504 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 TLDC1Q6P9B6 456 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 ERICH1Q86X53 443 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 GPR101Q96P66 508 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 PANK4Q9NVE7 773 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 RMND1Q9NWS8 449 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 IQSEC3Q9UPP2 1182 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 TMA7Q9Y2S6 64 aaKnown RBP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 AGLP35573 1532 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 MROH1Q8NDA8 1641 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 ZNF335Q9H4Z2 1342 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 ANKRD62A6NC57 917 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 MAGEA13PA6NCF6 341 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 DNM1LO00429 736 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 DKC1O60832 514 aaKnown RBP eCLIP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 BAG2O95816 211 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 MTIF2P46199 727 aaKnown RBP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 CACNA2D1P54289 1103 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 RNF220Q5VTB9 566 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 PI16Q6UXB8 463 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 RASGRP2Q7LDG7 609 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 OGFOD1Q8N543 542 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 PDCD7Q8N8D1 485 aaKnown RBP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 GFM2Q969S9 779 aaKnown RBP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 EIF2AQ9BY44 585 aaKnown RBP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 SAMSN1Q9NSI8 373 aaKnown RBP8.33□□□□□ -1.08
VTI1A-201ENST00000393077 TAB2Q9NYJ8 693 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 NKIRAS1Q9NYS0 192 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 SLC4A7Q9Y6M7 1214 aa8.33□□□□□ -1.08
VTI1A-201ENST00000393077 AOX1Q06278 1338 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 A0A1W2PRG0 241 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 ESYT3A0FGR9 886 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 NPTXRO95502 500 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 ARPC4P59998 168 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 NMIQ13287 307 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-201ENST00000393077 LINS1Q8NG48 757 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 PRPF31Q8WWY3 499 aaKnown RBP8.32□□□□□ -1.08
VTI1A-201ENST00000393077 SMC6Q96SB8 1091 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 KRT12Q99456 494 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 KRT23Q9C075 422 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 TANGO6Q9C0B7 1094 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 EBF2Q9HAK2 575 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 EXOC1Q9NV70 894 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 RTEL1Q9NZ71 1219 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 WDR35Q9P2L0 1181 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 ADAMTS13Q76LX8 1427 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 PNMA6EA0A0J9YXQ4 647 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 ABLIM1O14639 778 aa8.32□□□□□ -1.08
VTI1A-201ENST00000393077 EEF2P13639 858 aaKnown RBP8.32□□□□□ -1.08
VTI1A-201ENST00000393077 IGHMBP2P38935 993 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms