RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 FAM160B2Q86V87 743 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 M0QZ92 97 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 RFX5P48382 616 aaPredicted RBP18.26■□□□□ 0.51
SCN3B-202ENST00000392770 GRM4Q14833 912 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 PYCARDQ9ULZ3 195 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 MYO3BQ8WXR4 1341 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 H0YCG3 227 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 ZNF500O60304 480 aaPredicted RBP18.26■□□□□ 0.51
SCN3B-202ENST00000392770 KLHL7Q8IXQ5 586 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 CEP95Q96GE4 821 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 GOLPH3LQ9H4A5 285 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 RWDD2AQ9UIY3 292 aa18.26■□□□□ 0.51
SCN3B-202ENST00000392770 MYL1P05976 194 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 HSPA1LP34931 641 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 RCAN1P53805 252 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 ZNF341Q9BYN7 854 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 NSRP1Q9H0G5 558 aaKnown RBP18.25■□□□□ 0.51
SCN3B-202ENST00000392770 CPVLQ9H3G5 476 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 MST1RQ04912 1400 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.51
SCN3B-202ENST00000392770 SF3B3Q15393 1217 aaKnown RBP18.25■□□□□ 0.51
SCN3B-202ENST00000392770 ARL6IP4Q66PJ3 421 aaKnown RBP18.25■□□□□ 0.51
SCN3B-202ENST00000392770 ZFP91Q96JP5 570 aaPredicted RBP18.25■□□□□ 0.51
SCN3B-202ENST00000392770 NRBP2Q9NSY0 501 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 UBN2Q6ZU65 1347 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 FAM196BA6NMK8 535 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 CD19P15391 556 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 GAP43P17677 238 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 DNAJC21Q5F1R6 531 aaKnown RBP18.25■□□□□ 0.51
SCN3B-202ENST00000392770 ANO3Q9BYT9 981 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 WDR11Q9BZH6 1224 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 SUGCTQ9HAC7 445 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 TLDC2A0PJX2 215 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 OSBPP22059 807 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 RBL2Q08999 1139 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 SEPT14Q6ZU15 432 aa18.25■□□□□ 0.51
SCN3B-202ENST00000392770 CFAP221Q4G0U5 840 aa18.24■□□□□ 0.51
SCN3B-202ENST00000392770 IFT20Q8IY31 132 aa18.24■□□□□ 0.51
SCN3B-202ENST00000392770 OGFRQ9NZT2 677 aa18.24■□□□□ 0.51
SCN3B-202ENST00000392770 NSUN4Q96CB9 384 aaKnown RBP18.24■□□□□ 0.51
SCN3B-202ENST00000392770 PLCD4Q9BRC7 762 aa18.24■□□□□ 0.51
SCN3B-202ENST00000392770 KCTD2Q14681 263 aa18.24■□□□□ 0.51
SCN3B-202ENST00000392770 DCUN1D2Q6PH85 259 aa18.24■□□□□ 0.51
SCN3B-202ENST00000392770 EEF1GP26641 437 aaKnown RBP18.24■□□□□ 0.51
SCN3B-202ENST00000392770 KMT5BQ4FZB7 885 aa18.24■□□□□ 0.51
SCN3B-202ENST00000392770 ZNF512BQ96KM6 892 aaPredicted RBP18.24■□□□□ 0.51
SCN3B-202ENST00000392770 LRRIQ4A6NIV6 560 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 BUB1O43683 1085 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 DLATP10515 647 aaKnown RBP18.23■□□□□ 0.51
SCN3B-202ENST00000392770 ABCB4P21439 1286 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 MIS18BP1Q6P0N0 1132 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 TRERF1Q96PN7 1200 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 MTA3Q9BTC8 594 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 ZBTB5O15062 677 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 ATP2A2P16615 1042 aaKnown RBP18.23■□□□□ 0.51
SCN3B-202ENST00000392770 EXOSC10Q01780 885 aaKnown RBP18.23■□□□□ 0.51
SCN3B-202ENST00000392770 ZNF277Q9NRM2 450 aaPredicted RBP18.23■□□□□ 0.51
SCN3B-202ENST00000392770 SLIT1O75093 1534 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 NR2F2P24468 414 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 PRR5LQ6MZQ0 368 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 ATRIPQ8WXE1 791 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 DISC1Q9NRI5 854 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 SAMSN1Q9NSI8 373 aaKnown RBP18.23■□□□□ 0.51
SCN3B-202ENST00000392770 ANKFY1Q9P2R3 1169 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 SNX16P57768 344 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 MYL7Q01449 175 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 EN1Q05925 392 aaPredicted RBP18.23■□□□□ 0.51
SCN3B-202ENST00000392770 FAM83BQ5T0W9 1011 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 OTUD6BQ8N6M0 293 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 TRIM58Q8NG06 486 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 TRIM31Q9BZY9 425 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 PXDNQ92626 1479 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 SAR1BQ9Y6B6 198 aa18.23■□□□□ 0.51
SCN3B-202ENST00000392770 IGBP1P78318 339 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 NBPF11Q86T75 865 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 ATP6V0A1Q93050 837 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 ATP2C2O75185 946 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 PLA2G4BP0C869 781 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 CAPN2P17655 700 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 YWHAEP62258 255 aaKnown RBP18.22■□□□□ 0.51
SCN3B-202ENST00000392770 TBC1D16Q8TBP0 767 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 NACC1Q96RE7 527 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 ORC4O43929 436 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 P4HA1P13674 534 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 PPP1R13BQ96KQ4 1090 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 C1orf112Q9NSG2 853 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 MYOM1P52179 1685 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 EXOC3L4Q17RC7 722 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 CCDC127Q96BQ5 260 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 ACTN4O43707 911 aaKnown RBP18.22■□□□□ 0.51
SCN3B-202ENST00000392770 SEPT2Q15019 361 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 DAAM2Q86T65 1068 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 FAM76AQ8TAV0 307 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 POMGNT1Q8WZA1 660 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 RIC8AQ9NPQ8 531 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 ZDHHC9Q9Y397 364 aa18.22■□□□□ 0.51
SCN3B-202ENST00000392770 TAF12Q16514 161 aa18.21■□□□□ 0.51
SCN3B-202ENST00000392770 RNF34Q969K3 372 aa18.21■□□□□ 0.51
SCN3B-202ENST00000392770 USP17L10C9JJH3 530 aa18.21■□□□□ 0.51
SCN3B-202ENST00000392770 TBC1D10BQ4KMP7 808 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms