RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 UBE2SQ16763 222 aa17.11■□□□□ 0.33
SUMO1-203ENST00000392246 ARHGEF16Q5VV41 709 aa17.11■□□□□ 0.33
SUMO1-203ENST00000392246 INTS4Q96HW7 963 aaKnown RBP17.11■□□□□ 0.33
SUMO1-203ENST00000392246 IWS1Q96ST2 819 aa17.11■□□□□ 0.33
SUMO1-203ENST00000392246 BIN2Q9UBW5 565 aaPredicted RBP17.11■□□□□ 0.33
SUMO1-203ENST00000392246 SPDYE3A6NKU9 549 aa17.1■□□□□ 0.33
SUMO1-203ENST00000392246 FOSP01100 380 aaPredicted RBP17.1■□□□□ 0.33
SUMO1-203ENST00000392246 GJB2P29033 226 aa17.1■□□□□ 0.33
SUMO1-203ENST00000392246 CLK2P49760 499 aaKnown RBP17.1■□□□□ 0.33
SUMO1-203ENST00000392246 COL13A1Q5TAT6 717 aaPredicted RBP17.1■□□□□ 0.33
SUMO1-203ENST00000392246 MCTP2Q6DN12 878 aa17.1■□□□□ 0.33
SUMO1-203ENST00000392246 ARMCX2Q7L311 632 aa17.1■□□□□ 0.33
SUMO1-203ENST00000392246 SH3TC2Q8TF17 1288 aa17.1■□□□□ 0.33
SUMO1-203ENST00000392246 C8orf76Q96K31 380 aa17.1■□□□□ 0.33
SUMO1-203ENST00000392246 PHF20Q9BVI0 1012 aa17.1■□□□□ 0.33
SUMO1-203ENST00000392246 PXMP2Q9NR77 195 aa17.1■□□□□ 0.33
SUMO1-203ENST00000392246 PCDHA4Q9UN74 947 aa17.1■□□□□ 0.33
SUMO1-203ENST00000392246 KCNJ14Q9UNX9 436 aa17.1■□□□□ 0.33
SUMO1-203ENST00000392246 INHAP05111 366 aa17.09■□□□□ 0.33
SUMO1-203ENST00000392246 CYP2C19P33261 490 aa17.09■□□□□ 0.33
SUMO1-203ENST00000392246 UBXN2AP68543 259 aa17.09■□□□□ 0.33
SUMO1-203ENST00000392246 AP3B2Q13367 1082 aa17.09■□□□□ 0.33
SUMO1-203ENST00000392246 BLIDQ8IZY5 108 aa17.09■□□□□ 0.33
SUMO1-203ENST00000392246 REXO1Q8N1G1 1221 aaKnown RBP17.09■□□□□ 0.33
SUMO1-203ENST00000392246 DAGLBQ8NCG7 672 aa17.09■□□□□ 0.33
SUMO1-203ENST00000392246 MORC4Q8TE76 937 aa17.09■□□□□ 0.33
SUMO1-203ENST00000392246 EHMT1Q9H9B1 1298 aa17.09■□□□□ 0.33
SUMO1-203ENST00000392246 GJB4Q9NTQ9 266 aa17.09■□□□□ 0.33
SUMO1-203ENST00000392246 PCDHA6Q9UN73 950 aa17.09■□□□□ 0.33
SUMO1-203ENST00000392246 PCDHA8Q9Y5H6 950 aa17.09■□□□□ 0.33
SUMO1-203ENST00000392246 SNAI1O95863 264 aaPredicted RBP17.08■□□□□ 0.32
SUMO1-203ENST00000392246 EIF2AK2P19525 551 aaKnown RBP17.08■□□□□ 0.32
SUMO1-203ENST00000392246 EDNRBP24530 442 aa17.08■□□□□ 0.32
SUMO1-203ENST00000392246 JAKMIP3Q5VZ66 844 aa17.08■□□□□ 0.32
SUMO1-203ENST00000392246 PDCD2LQ9BRP1 358 aa17.08■□□□□ 0.32
SUMO1-203ENST00000392246 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.08■□□□□ 0.32
SUMO1-203ENST00000392246 CNPY2Q9Y2B0 182 aa17.08■□□□□ 0.32
SUMO1-203ENST00000392246 HTTP42858 3142 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 NR3C2P08235 984 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 FOSBP53539 338 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 CACNB2Q08289 660 aaPredicted RBP17.07■□□□□ 0.32
SUMO1-203ENST00000392246 PDE4DQ08499 809 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 TRIM32Q13049 653 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 BECN1Q14457 450 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 PGM5Q15124 567 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 NPY5RQ15761 445 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 KRT40Q6A162 431 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 ARMC5Q96C12 935 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 ABHD16BQ9H3Z7 469 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 BRMS1Q9HCU9 246 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 TMEM260Q9NX78 707 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 NRBP1Q9UHY1 535 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 FRMPD4Q14CM0 1322 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 RPTORQ8N122 1335 aa17.07■□□□□ 0.32
SUMO1-203ENST00000392246 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 MMP1P03956 469 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 HSP90AA1P07900 732 aaKnown RBP17.06■□□□□ 0.32
SUMO1-203ENST00000392246 PRKAR2AP13861 404 aaKnown RBP17.06■□□□□ 0.32
SUMO1-203ENST00000392246 STXBP2Q15833 593 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 MAP3K21Q5TCX8 1036 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 FBXO18Q8NFZ0 1043 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 ANO3Q9BYT9 981 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 M0R2N6 131 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 MYCLP12524 364 aaPredicted RBP17.06■□□□□ 0.32
SUMO1-203ENST00000392246 CCND2P30279 289 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 KRT2P35908 639 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 ACVR2BQ13705 512 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 SAFBQ15424 915 aaKnown RBP eCLIP17.06■□□□□ 0.32
SUMO1-203ENST00000392246 PRAMEF19Q5SWL8 479 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 XRRA1Q6P2D8 792 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 VSIG10LQ86VR7 867 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 RASGRP4Q8TDF6 673 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 ZNF333Q96JL9 665 aa17.06■□□□□ 0.32
SUMO1-203ENST00000392246 DDX49Q9Y6V7 483 aaKnown RBP17.06■□□□□ 0.32
SUMO1-203ENST00000392246 EIF3JO75822 258 aaKnown RBP17.05■□□□□ 0.32
SUMO1-203ENST00000392246 CYBAP13498 195 aa17.05■□□□□ 0.32
SUMO1-203ENST00000392246 GUCY1B3Q02153 619 aa17.05■□□□□ 0.32
SUMO1-203ENST00000392246 PCNX4Q63HM2 1172 aa17.05■□□□□ 0.32
SUMO1-203ENST00000392246 PGBD1Q96JS3 809 aa17.05■□□□□ 0.32
SUMO1-203ENST00000392246 HMX1Q9NP08 348 aaPredicted RBP17.05■□□□□ 0.32
SUMO1-203ENST00000392246 VTA1Q9NP79 307 aa17.05■□□□□ 0.32
SUMO1-203ENST00000392246 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
SUMO1-203ENST00000392246 CENPFP49454 3210 aa17.05■□□□□ 0.32
SUMO1-203ENST00000392246 MYH7BA7E2Y1 1941 aa17.04■□□□□ 0.32
SUMO1-203ENST00000392246 KIAA1217Q5T5P2 1943 aa17.04■□□□□ 0.32
SUMO1-203ENST00000392246 STAM2O75886 525 aa17.04■□□□□ 0.32
SUMO1-203ENST00000392246 ZNF865P0CJ78 1059 aaPredicted RBP17.04■□□□□ 0.32
SUMO1-203ENST00000392246 SREBF1P36956 1147 aa17.04■□□□□ 0.32
SUMO1-203ENST00000392246 LARP1BQ659C4 914 aaKnown RBP17.04■□□□□ 0.32
SUMO1-203ENST00000392246 EEPD1Q7L9B9 569 aa17.04■□□□□ 0.32
SUMO1-203ENST00000392246 DIS3L2Q8IYB7 885 aaKnown RBP17.04■□□□□ 0.32
SUMO1-203ENST00000392246 TRPV1Q8NER1 839 aa17.04■□□□□ 0.32
SUMO1-203ENST00000392246 IL31RAQ8NI17 732 aa17.04■□□□□ 0.32
SUMO1-203ENST00000392246 KATNBL1Q9H079 304 aa17.04■□□□□ 0.32
SUMO1-203ENST00000392246 ZHX1Q9UKY1 873 aaPredicted RBP17.04■□□□□ 0.32
SUMO1-203ENST00000392246 LRRC37A2A6NM11 1700 aa17.04■□□□□ 0.32
SUMO1-203ENST00000392246 PDCP20941 246 aa17.03■□□□□ 0.32
SUMO1-203ENST00000392246 CCND3P30281 292 aaPredicted RBP17.03■□□□□ 0.32
SUMO1-203ENST00000392246 MTFR1Q15390 333 aa17.03■□□□□ 0.32
SUMO1-203ENST00000392246 KRT25Q7Z3Z0 450 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms