RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 POLR2MP0CAP2 368 aa12.9□□□□□ -0.34
SMARCAL1-203ENST00000392128 PLCG1P19174 1290 aa12.9□□□□□ -0.34
SMARCAL1-203ENST00000392128 CASP1P29466 404 aa12.9□□□□□ -0.34
SMARCAL1-203ENST00000392128 SPP2Q13103 211 aa12.9□□□□□ -0.34
SMARCAL1-203ENST00000392128 CUL4BQ13620 913 aa12.9□□□□□ -0.34
SMARCAL1-203ENST00000392128 CALML4Q96GE6 196 aa12.9□□□□□ -0.34
SMARCAL1-203ENST00000392128 MRFAP1L1Q96HT8 127 aa12.9□□□□□ -0.34
SMARCAL1-203ENST00000392128 ZNF536O15090 1300 aa12.9□□□□□ -0.34
SMARCAL1-203ENST00000392128 ESPNB1AK53 854 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 TBX3O15119 743 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 HOXA13P31271 388 aaPredicted RBP12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 SEMA3FQ13275 785 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 GLIPR1L2Q4G1C9 344 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 ZSCAN30Q86W11 494 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 FAM43AQ8N2R8 423 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 STAMQ92783 540 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 C12orf42Q96LP6 360 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 RMND1Q9NWS8 449 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 RLFQ13129 1914 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 ERCC5P28715 1186 aaPredicted RBP12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 SLFN12Q8IYM2 578 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 LRRC15Q8TF66 581 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 L3MBTL3Q96JM7 780 aaPredicted RBP12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 TANGO6Q9C0B7 1094 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 HSD3B7Q9H2F3 369 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 BLZF1Q9H2G9 400 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 SLC38A10Q9HBR0 1119 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 PNMA2Q9UL42 364 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 CCPG1Q9ULG6 757 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 PPP1R9AQ9ULJ8 1098 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 PCDHA12Q9UN75 941 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 WDR90Q96KV7 1748 aa12.89□□□□□ -0.35
SMARCAL1-203ENST00000392128 POTEMA6NI47 508 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 GOLGA6L6A8MZA4 724 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 C19orf81C9J6K1 198 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 SLC26A4O43511 780 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 MARCH6O60337 910 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 CFBP00751 764 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 FDX1P10109 184 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 DGKZQ13574 1117 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 KRT79Q5XKE5 535 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 ETNPPLQ8TBG4 499 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 ENOX1Q8TC92 643 aaKnown RBP12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 LENG9Q96B70 501 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 DCPSQ96C86 337 aaKnown RBP12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 RPAP3Q9H6T3 665 aaPredicted RBP12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 STK17AQ9UEE5 414 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 FZD1Q9UP38 647 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 OTOFQ9HC10 1997 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 FLOT1O75955 427 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 RPN1P04843 607 aaKnown RBP12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 GHRHRQ02643 423 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 GRB10Q13322 594 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 DPY19L2Q6NUT2 758 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 PLIN2Q99541 437 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 EHMT1Q9H9B1 1298 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 ZHX2Q9Y6X8 837 aa12.88□□□□□ -0.35
SMARCAL1-203ENST00000392128 FAM86B1E9PN63 330 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 USP2O75604 605 aaPredicted RBP12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 TPM3P06753 285 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 FAM86B2P0C5J1 330 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 HSD17B4P51659 736 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 KCNB1Q14721 858 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 FCHSD1Q86WN1 690 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 SULF1Q8IWU6 871 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 SNX29Q8TEQ0 813 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 TBC1D5Q92609 795 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 AGBL1Q96MI9 1066 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 PNMA5Q96PV4 448 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 ZC3H4Q9UPT8 1303 aaKnown RBP12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 AMPD3Q01432 767 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 TMEM119Q4V9L6 283 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 PRR16Q569H4 304 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 HYIQ5T013 277 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 ZNF658Q5TYW1 1059 aaPredicted RBP12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 CDK5RAP3Q96JB5 506 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 FAM20AQ96MK3 541 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 C7orf25Q9BPX7 421 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 ZKSCAN5Q9Y2L8 839 aa12.87□□□□□ -0.35
SMARCAL1-203ENST00000392128 PTPRFP10586 1907 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 COL11A1P12107 1806 aaPredicted RBP12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 KDM3AQ9Y4C1 1321 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 PPP1R3GB7ZBB8 358 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 USP50Q70EL3 339 aaPredicted RBP12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 MCF2L2Q86YR7 1114 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 SAMD3Q8N6K7 520 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 SPC24Q8NBT2 197 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 CLEC4DQ8WXI8 215 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 BLOC1S4Q9NUP1 217 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 MAP3K20Q9NYL2 800 aaKnown RBP12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 AFG3L2Q9Y4W6 797 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 SCN4AP35499 1836 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 KLRC4O43908 158 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 ZBED4O75132 1171 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 GJA10Q969M2 543 aa12.86□□□□□ -0.35
SMARCAL1-203ENST00000392128 NUDT12Q9BQG2 462 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms