RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 SCRN1Q12765 414 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 RABEP1Q15276 862 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 LHX8Q68G74 356 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 NOL8Q76FK4 1167 aaKnown RBP17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 TEX2Q8IWB9 1127 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 ANKLE1Q8NAG6 615 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 SMARCC2Q8TAQ2 1214 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 PHKBQ93100 1093 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 TBC1D32Q96NH3 1257 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 SLC26A6Q9BXS9 759 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 KATNBL1Q9H079 304 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 PSTPIP2Q9H939 334 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 PXMP2Q9NR77 195 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 BARHL2Q9NY43 387 aa17.31■□□□□ 0.36
IGHV3-53-201ENST00000390627 STXBP3O00186 592 aa17.3■□□□□ 0.36
IGHV3-53-201ENST00000390627 EIF2AK2P19525 551 aaKnown RBP17.3■□□□□ 0.36
IGHV3-53-201ENST00000390627 SSRP1Q08945 709 aaKnown RBP17.3■□□□□ 0.36
IGHV3-53-201ENST00000390627 FCHSD1Q86WN1 690 aa17.3■□□□□ 0.36
IGHV3-53-201ENST00000390627 FBXO16Q8IX29 292 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-53-201ENST00000390627 CCDC12Q8WUD4 166 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-53-201ENST00000390627 GLT8D2Q9H1C3 349 aa17.3■□□□□ 0.36
IGHV3-53-201ENST00000390627 FRMPD3Q5JV73 1810 aa17.29■□□□□ 0.36
IGHV3-53-201ENST00000390627 FARP2O94887 1054 aaPredicted RBP17.29■□□□□ 0.36
IGHV3-53-201ENST00000390627 CCDC144BQ3MJ40 725 aa17.29■□□□□ 0.36
IGHV3-53-201ENST00000390627 ANO1Q5XXA6 986 aa17.29■□□□□ 0.36
IGHV3-53-201ENST00000390627 EEPD1Q7L9B9 569 aa17.29■□□□□ 0.36
IGHV3-53-201ENST00000390627 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
IGHV3-53-201ENST00000390627 MEIS2O14770 477 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 ST18O60284 1047 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 DEXIO95424 95 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 ADCY7P51828 1080 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 STXBP2Q15833 593 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 PKN1Q16512 942 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 ME3Q16798 604 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 TYW1BQ6NUM6 668 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 USP17L6PQ6QN14 398 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 ARRDC4Q8NCT1 418 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 CCDC148Q8NFR7 591 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 GTF3C6Q969F1 213 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 PDCD2LQ9BRP1 358 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 RIC8AQ9NPQ8 531 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 XPNPEP3Q9NQH7 507 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 LIMCH1Q9UPQ0 1083 aa17.28■□□□□ 0.36
IGHV3-53-201ENST00000390627 FRMPD4Q14CM0 1322 aa17.27■□□□□ 0.36
IGHV3-53-201ENST00000390627 ESYT2A0FGR8 921 aa17.27■□□□□ 0.36
IGHV3-53-201ENST00000390627 SPDYE3A6NKU9 549 aa17.27■□□□□ 0.36
IGHV3-53-201ENST00000390627 DUSP11O75319 330 aaKnown RBP17.27■□□□□ 0.36
IGHV3-53-201ENST00000390627 NR3C2P08235 984 aa17.27■□□□□ 0.36
IGHV3-53-201ENST00000390627 TNFAIP2Q03169 654 aa17.27■□□□□ 0.36
IGHV3-53-201ENST00000390627 PGM5Q15124 567 aa17.27■□□□□ 0.36
IGHV3-53-201ENST00000390627 IQSEC1Q6DN90 963 aa17.27■□□□□ 0.36
IGHV3-53-201ENST00000390627 TAPT1Q6NXT6 567 aa17.27■□□□□ 0.36
IGHV3-53-201ENST00000390627 EHMT1Q9H9B1 1298 aa17.27■□□□□ 0.36
IGHV3-53-201ENST00000390627 SPC25Q9HBM1 224 aa17.27■□□□□ 0.36
IGHV3-53-201ENST00000390627 STK36Q9NRP7 1315 aa17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 SMCO2A6NFE2 343 aa17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 DNM1LO00429 736 aa17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 PPFIA3O75145 1194 aa17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 EIF3JO75822 258 aaKnown RBP17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 LARGE1O95461 756 aa17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 CCND2P30279 289 aa17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 ADCYAP1R1P41586 468 aa17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 UBE2SQ16763 222 aa17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 RNF180Q86T96 592 aa17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 SCFD2Q8WU76 684 aa17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 ZSCAN31Q96LW9 406 aaPredicted RBP17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 SH3GLB2Q9NR46 395 aa17.26■□□□□ 0.35
IGHV3-53-201ENST00000390627 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 RBM47A0AV96 593 aaKnown RBP17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 KBTBD13C9JR72 458 aa17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 MYCLP12524 364 aaPredicted RBP17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 GNA11P29992 359 aa17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 MLLT1Q03111 559 aaPredicted RBP17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 NECAB2Q7Z6G3 386 aa17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 UBE2Q1Q7Z7E8 422 aa17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 FAM177A1Q8N128 213 aaPredicted RBP17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 NECAB1Q8N987 351 aa17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 LENG1Q96BZ8 264 aaPredicted RBP17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 WDR11Q9BZH6 1224 aa17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 ZMYND12Q9H0C1 365 aa17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 C6orf50Q9HD87 102 aa17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 PDGFCQ9NRA1 345 aa17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 SH2B1Q9NRF2 756 aaPredicted RBP17.25■□□□□ 0.35
IGHV3-53-201ENST00000390627 SYNRGQ9UMZ2 1314 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 NKRFO15226 690 aaKnown RBP eCLIP17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 ADCY6O43306 1168 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 STAM2O75886 525 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 PGK1P00558 417 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 FOSP01100 380 aaPredicted RBP17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 MYCNP04198 464 aaPredicted RBP17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 AP3B2Q13367 1082 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 TTLL4Q14679 1199 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 LRRC41Q15345 812 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 MCTP2Q6DN12 878 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 XRRA1Q6P2D8 792 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 TLK2Q86UE8 772 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 VSIG10LQ86VR7 867 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 IL31RAQ8NI17 732 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 BICD2Q8TD16 824 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 WASF1Q92558 559 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms