RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 SUGCTQ9HAC7 445 aa14.01□□□□□ -0.17
SOD1-202ENST00000389995 SYNPO2Q9UMS6 1093 aa14.01□□□□□ -0.17
SOD1-202ENST00000389995 PITPNM1O00562 1244 aa14□□□□□ -0.17
SOD1-202ENST00000389995 RNF113AO15541 343 aaKnown RBP14□□□□□ -0.17
SOD1-202ENST00000389995 KCNA5P22460 613 aa14□□□□□ -0.17
SOD1-202ENST00000389995 CALML3P27482 149 aa14□□□□□ -0.17
SOD1-202ENST00000389995 SSTR3P32745 418 aaPredicted RBP14□□□□□ -0.17
SOD1-202ENST00000389995 KCNJ6P48051 423 aa14□□□□□ -0.17
SOD1-202ENST00000389995 RCSD1Q6JBY9 416 aa14□□□□□ -0.17
SOD1-202ENST00000389995 SLC30A10Q6XR72 485 aa14□□□□□ -0.17
SOD1-202ENST00000389995 FAM178BQ8IXR5 827 aa14□□□□□ -0.17
SOD1-202ENST00000389995 GJD3Q8N144 294 aa14□□□□□ -0.17
SOD1-202ENST00000389995 GADD45GIP1Q8TAE8 222 aaPredicted RBP14□□□□□ -0.17
SOD1-202ENST00000389995 STX8Q9UNK0 236 aa14□□□□□ -0.17
SOD1-202ENST00000389995 NOD1Q9Y239 953 aa14□□□□□ -0.17
SOD1-202ENST00000389995 CFAP54Q96N23 3096 aa14□□□□□ -0.17
SOD1-202ENST00000389995 RBM47A0AV96 593 aaKnown RBP13.99□□□□□ -0.17
SOD1-202ENST00000389995 PTPDC1A2A3K4 754 aa13.99□□□□□ -0.17
SOD1-202ENST00000389995 PRR33A8MZF0 331 aa13.99□□□□□ -0.17
SOD1-202ENST00000389995 MRE11P49959 708 aa13.99□□□□□ -0.17
SOD1-202ENST00000389995 PTGISQ16647 500 aa13.99□□□□□ -0.17
SOD1-202ENST00000389995 NFRKBQ6P4R8 1299 aa13.99□□□□□ -0.17
SOD1-202ENST00000389995 KBTBD3Q8NAB2 608 aa13.99□□□□□ -0.17
SOD1-202ENST00000389995 ANKS1AQ92625 1134 aa13.99□□□□□ -0.17
SOD1-202ENST00000389995 CTAGE1Q96RT6 745 aa13.99□□□□□ -0.17
SOD1-202ENST00000389995 ZNF287Q9HBT7 754 aa13.99□□□□□ -0.17
SOD1-202ENST00000389995 IL17RBQ9NRM6 502 aa13.99□□□□□ -0.17
SOD1-202ENST00000389995 ZBTB40Q9NUA8 1239 aa13.99□□□□□ -0.17
SOD1-202ENST00000389995 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.98□□□□□ -0.17
SOD1-202ENST00000389995 PATL2C9JE40 543 aaKnown RBP13.98□□□□□ -0.17
SOD1-202ENST00000389995 BAIAP3O94812 1187 aa13.98□□□□□ -0.17
SOD1-202ENST00000389995 ARIH2O95376 493 aa13.98□□□□□ -0.17
SOD1-202ENST00000389995 ICAM1P05362 532 aa13.98□□□□□ -0.17
SOD1-202ENST00000389995 CTDSPL2Q05D32 466 aa13.98□□□□□ -0.17
SOD1-202ENST00000389995 BFSP2Q13515 415 aa13.98□□□□□ -0.17
SOD1-202ENST00000389995 CCDC96Q2M329 555 aa13.98□□□□□ -0.17
SOD1-202ENST00000389995 GDF6Q6KF10 455 aaPredicted RBP13.98□□□□□ -0.17
SOD1-202ENST00000389995 DHX38Q92620 1227 aaKnown RBP13.98□□□□□ -0.17
SOD1-202ENST00000389995 LRRCC1Q9C099 1032 aa13.98□□□□□ -0.17
SOD1-202ENST00000389995 ADD3Q9UEY8 706 aaKnown RBP13.98□□□□□ -0.17
SOD1-202ENST00000389995 FRMPD2Q68DX3 1309 aaPredicted RBP13.97□□□□□ -0.17
SOD1-202ENST00000389995 LINC01553A4QN01 128 aa13.97□□□□□ -0.17
SOD1-202ENST00000389995 A6NJR5 290 aa13.97□□□□□ -0.17
SOD1-202ENST00000389995 PLA2G6O60733 806 aa13.97□□□□□ -0.17
SOD1-202ENST00000389995 NBNO60934 754 aa13.97□□□□□ -0.17
SOD1-202ENST00000389995 PDE4BQ07343 736 aa13.97□□□□□ -0.17
SOD1-202ENST00000389995 PPARAQ07869 468 aa13.97□□□□□ -0.17
SOD1-202ENST00000389995 PPP2R5BQ15173 497 aa13.97□□□□□ -0.17
SOD1-202ENST00000389995 LEXMQ3ZCV2 418 aa13.97□□□□□ -0.17
SOD1-202ENST00000389995 PTCRAQ6ISU1 281 aaPredicted RBP13.97□□□□□ -0.17
SOD1-202ENST00000389995 RANBP17Q9H2T7 1088 aaKnown RBP13.97□□□□□ -0.17
SOD1-202ENST00000389995 ECHDC1Q9NTX5 307 aa13.97□□□□□ -0.17
SOD1-202ENST00000389995 LMCD1Q9NZU5 365 aa13.97□□□□□ -0.17
SOD1-202ENST00000389995 TSPY2A6NKD2 308 aa13.96□□□□□ -0.17
SOD1-202ENST00000389995 H3BQ06 376 aaPredicted RBP13.96□□□□□ -0.17
SOD1-202ENST00000389995 TXNP10599 105 aaKnown RBP13.96□□□□□ -0.17
SOD1-202ENST00000389995 GNAT2P19087 354 aa13.96□□□□□ -0.17
SOD1-202ENST00000389995 ERVK-21P61565 698 aa13.96□□□□□ -0.17
SOD1-202ENST00000389995 HNRNPUQ00839 825 aaKnown RBP eCLIP13.96□□□□□ -0.17
SOD1-202ENST00000389995 NHLH1Q02575 133 aa13.96□□□□□ -0.17
SOD1-202ENST00000389995 PDE4DQ08499 809 aa13.96□□□□□ -0.17
SOD1-202ENST00000389995 BRDTQ58F21 947 aaPredicted RBP13.96□□□□□ -0.17
SOD1-202ENST00000389995 LRRC8DQ7L1W4 858 aa13.96□□□□□ -0.17
SOD1-202ENST00000389995 MIER1Q8N108 512 aa13.96□□□□□ -0.17
SOD1-202ENST00000389995 CLEC4DQ8WXI8 215 aa13.96□□□□□ -0.17
SOD1-202ENST00000389995 TGS1Q96RS0 853 aaKnown RBP13.96□□□□□ -0.17
SOD1-202ENST00000389995 C17orf80Q9BSJ5 609 aa13.96□□□□□ -0.17
SOD1-202ENST00000389995 GPCPD1Q9NPB8 672 aa13.96□□□□□ -0.17
SOD1-202ENST00000389995 GJB5O95377 273 aa13.95□□□□□ -0.18
SOD1-202ENST00000389995 SELPP16109 830 aa13.95□□□□□ -0.18
SOD1-202ENST00000389995 PTPN11Q06124 597 aaPredicted RBP13.95□□□□□ -0.18
SOD1-202ENST00000389995 CSPP1Q1MSJ5 1256 aa13.95□□□□□ -0.18
SOD1-202ENST00000389995 CNKSR3Q6P9H4 555 aa13.95□□□□□ -0.18
SOD1-202ENST00000389995 RNF207Q6ZRF8 634 aa13.95□□□□□ -0.18
SOD1-202ENST00000389995 CHST3Q7LGC8 479 aa13.95□□□□□ -0.18
SOD1-202ENST00000389995 AFG1LQ8WV93 481 aa13.95□□□□□ -0.18
SOD1-202ENST00000389995 FBXL18Q96ME1 805 aa13.95□□□□□ -0.18
SOD1-202ENST00000389995 RAD9AQ99638 391 aa13.95□□□□□ -0.18
SOD1-202ENST00000389995 NAPBQ9H115 298 aa13.95□□□□□ -0.18
SOD1-202ENST00000389995 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.95□□□□□ -0.18
SOD1-202ENST00000389995 DOCK5Q9H7D0 1870 aa13.95□□□□□ -0.18
SOD1-202ENST00000389995 TECTAO75443 2155 aa13.95□□□□□ -0.18
SOD1-202ENST00000389995 RAD50Q92878 1312 aa13.94□□□□□ -0.18
SOD1-202ENST00000389995 GRXCR2A6NFK2 248 aa13.94□□□□□ -0.18
SOD1-202ENST00000389995 RANBP6O60518 1105 aaKnown RBP13.94□□□□□ -0.18
SOD1-202ENST00000389995 SLC3A2P08195 630 aaKnown RBP13.94□□□□□ -0.18
SOD1-202ENST00000389995 CKBP12277 381 aa13.94□□□□□ -0.18
SOD1-202ENST00000389995 PRKCSHP14314 528 aaPredicted RBP13.94□□□□□ -0.18
SOD1-202ENST00000389995 RPS6P62753 249 aaKnown RBP13.94□□□□□ -0.18
SOD1-202ENST00000389995 LY6KQ17RY6 165 aa13.94□□□□□ -0.18
SOD1-202ENST00000389995 LRRFIP1Q32MZ4 808 aaKnown RBP13.94□□□□□ -0.18
SOD1-202ENST00000389995 SYDE2Q5VT97 1194 aa13.94□□□□□ -0.18
SOD1-202ENST00000389995 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.94□□□□□ -0.183e-12■■■■■ 51.2
SOD1-202ENST00000389995 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
SOD1-202ENST00000389995 AFAP1L1Q8TED9 768 aa13.94□□□□□ -0.18
SOD1-202ENST00000389995 SCFD2Q8WU76 684 aa13.94□□□□□ -0.18
SOD1-202ENST00000389995 KAT2BQ92831 832 aa13.94□□□□□ -0.18
SOD1-202ENST00000389995 WNT8BQ93098 351 aa13.94□□□□□ -0.18
SOD1-202ENST00000389995 CRBNQ96SW2 442 aa13.94□□□□□ -0.18
SOD1-202ENST00000389995 NACAP1Q9BZK3 213 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms