RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ASIC3Q9UHC3 531 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 POTEJP0CG39 1038 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 ZKSCAN8Q15776 578 aaPredicted RBP15.66■□□□□ 0.1
RTF1-201ENST00000389629 RNF10Q8N5U6 811 aaKnown RBP15.66■□□□□ 0.1
RTF1-201ENST00000389629 STAG1Q8WVM7 1258 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 CUL5Q93034 780 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 AP1M1Q9BXS5 423 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 HPSEQ9Y251 543 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 MEFVO15553 781 aaPredicted RBP15.66■□□□□ 0.1
RTF1-201ENST00000389629 TNFAIP3P21580 790 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 CCNE1P24864 410 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 SETDB2Q96T68 719 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 EIF3HO15372 352 aaKnown RBP eCLIP15.66■□□□□ 0.1
RTF1-201ENST00000389629 SLCO1A2P46721 670 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 PLCB3Q01970 1234 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 ADCY1Q08828 1119 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 LRRC41Q15345 812 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 DISC1Q9NRI5 854 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 ZBTB1Q9Y2K1 713 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 NLRP14Q86W24 1093 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 MAPKAPK5Q8IW41 473 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 MYOCDQ8IZQ8 938 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 RPGRQ92834 1020 aaKnown RBP15.66■□□□□ 0.1
RTF1-201ENST00000389629 PLCB1Q9NQ66 1216 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 IKBKGQ9Y6K9 419 aa15.66■□□□□ 0.1
RTF1-201ENST00000389629 STX2P32856 288 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 HLFQ16534 295 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 RAB17Q9H0T7 212 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 NUCKS1Q9H1E3 243 aaKnown RBP15.65■□□□□ 0.1
RTF1-201ENST00000389629 CTTNBP2NLQ9P2B4 639 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 TMEM131LA2VDJ0 1609 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 ZNF622Q969S3 477 aaKnown RBP eCLIP15.65■□□□□ 0.12e-7■■□□□ 14.3
RTF1-201ENST00000389629 KLHL29Q96CT2 875 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 SMARCAL1Q9NZC9 954 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 PCDHA4Q9UN74 947 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 ABCC12Q96J65 1359 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 EEF2P13639 858 aaKnown RBP15.65■□□□□ 0.1
RTF1-201ENST00000389629 TMEM132AQ24JP5 1023 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 RSRC2Q7L4I2 434 aaKnown RBP15.65■□□□□ 0.1
RTF1-201ENST00000389629 AMFRQ9UKV5 643 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 GSG1L2A8MUP6 293 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 HMGB1P1B2RPK0 211 aaPredicted RBP15.65■□□□□ 0.1
RTF1-201ENST00000389629 KRT14P02533 472 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 PLCG1P19174 1290 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 CCNI2Q6ZMN8 369 aaPredicted RBP15.65■□□□□ 0.1
RTF1-201ENST00000389629 NEK8Q86SG6 692 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 AGXT2Q9BYV1 514 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 VIPAS39Q9H9C1 493 aa15.65■□□□□ 0.1
RTF1-201ENST00000389629 KLRF2D3W0D1 207 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 TGFBRAP1Q8WUH2 860 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 ANKZF1Q9H8Y5 726 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 ARPP21Q9UBL0 812 aaPredicted RBP15.64■□□□□ 0.09
RTF1-201ENST00000389629 TPX2Q9ULW0 747 aaKnown RBP15.64■□□□□ 0.09
RTF1-201ENST00000389629 SMIM24O75264 130 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 SEC24CP53992 1094 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 MYO1EQ12965 1108 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 STXBP4Q6ZWJ1 553 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 FOXP4Q8IVH2 680 aaPredicted RBP15.64■□□□□ 0.09
RTF1-201ENST00000389629 GEMIN8Q9NWZ8 242 aaKnown RBP15.64■□□□□ 0.09
RTF1-201ENST00000389629 BTG4Q9NY30 223 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 KLHL14Q9P2G3 628 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 SPATA4Q8NEY3 305 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 CD248Q9HCU0 757 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 HOMER2Q9NSB8 354 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 HOMER3Q9NSC5 361 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.64■□□□□ 0.09
RTF1-201ENST00000389629 PREX1Q8TCU6 1659 aa15.64■□□□□ 0.09
RTF1-201ENST00000389629 PP2D1A8MPX8 630 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 SLC20A2Q08357 652 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 MUM1Q2TAK8 710 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 IQCGQ9H095 443 aaKnown RBP15.63■□□□□ 0.09
RTF1-201ENST00000389629 EPB41P11171 864 aaKnown RBP15.63■□□□□ 0.09
RTF1-201ENST00000389629 RPL13P26373 211 aaKnown RBP15.63■□□□□ 0.09
RTF1-201ENST00000389629 ADCY7P51828 1080 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 ENAHQ8N8S7 591 aaPredicted RBP15.63■□□□□ 0.09
RTF1-201ENST00000389629 OSBPL9Q96SU4 736 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 MAP3K14Q99558 947 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 ITSN1Q15811 1721 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 FAM13AO94988 1023 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 ATP5DP30049 168 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 VPS41P49754 854 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 PLTPP55058 493 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 RBBP5Q15291 538 aaKnown RBP15.63■□□□□ 0.09
RTF1-201ENST00000389629 LLGL1Q15334 1064 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 MAN2A1Q16706 1144 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 PPP1R14CQ8TAE6 165 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 ELAC2Q9BQ52 826 aaKnown RBP15.63■□□□□ 0.09
RTF1-201ENST00000389629 NDST4Q9H3R1 872 aa15.63■□□□□ 0.09
RTF1-201ENST00000389629 MRPL12P52815 198 aaKnown RBP15.62■□□□□ 0.09
RTF1-201ENST00000389629 TMTC3Q6ZXV5 915 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 HS2ST1Q7LGA3 356 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 PARP9Q8IXQ6 854 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 WHAMMQ8TF30 809 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 LIMA1Q9UHB6 759 aaKnown RBP15.62■□□□□ 0.09
RTF1-201ENST00000389629 ANO9A1A5B4 782 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 CCDC169A6NNP5 214 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 DPYDQ12882 1025 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 SYCE1Q8N0S2 351 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 MCUR1Q96AQ8 359 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 ANKRD2Q9GZV1 360 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 765.4 ms