RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TMEM87BQ96K49 555 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 TTYH3Q9C0H2 523 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 BLZF1Q9H2G9 400 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 CABP5Q9NP86 173 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 GHRP10912 638 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 PAFAH1B1P43034 410 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 MCAMP43121 646 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 CRKLP46109 303 aaKnown RBP16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 GUCY2FP51841 1108 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 KCNB1Q14721 858 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 CDC37Q16543 378 aaPredicted RBP16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 BZW1Q7L1Q6 419 aaKnown RBP16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 CACNA2D3Q8IZS8 1091 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 SAAL1Q96ER3 474 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 THOC1Q96FV9 657 aaKnown RBP16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 PSMB7Q99436 277 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 NUP58Q9BVL2 599 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 KDM4CQ9H3R0 1056 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 MLXIPQ9HAP2 919 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 EPB41L5Q9HCM4 733 aa16.22■□□□□ 0.19
VPS9D1-201ENST00000389386 ESYT3A0FGR9 886 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 ZSCAN5CA6NGD5 496 aaPredicted RBP16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 RASSF10A6NK89 507 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 B4E1Z4 1266 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 GPAA1O43292 621 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 PPIP5K2O43314 1243 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 ATP2C2O75185 946 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 SSR1P43307 286 aaKnown RBP16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 MYO1EQ12965 1108 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 CRELD2Q6UXH1 353 aaPredicted RBP16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 SH2D4AQ9H788 454 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 SLC39A2Q9NP94 309 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 BAIAP2L1Q9UHR4 511 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 PDS5AQ29RF7 1337 aaKnown RBP16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 MYH10P35580 1976 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 BUB1BO60566 1050 aaPredicted RBP16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 MOCS3O95396 460 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 CCDC96Q2M329 555 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 TRPC6Q9Y210 931 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 PLAAQ9Y263 795 aa16.21■□□□□ 0.19
VPS9D1-201ENST00000389386 TRIM75PA6NK02 468 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 GUCY2DQ02846 1103 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 CTDSPL2Q05D32 466 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 SUSD4Q5VX71 490 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 KRT26Q7Z3Y9 468 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 HOMER3Q9NSC5 361 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 C15orf41Q9Y2V0 281 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 RIC1Q4ADV7 1423 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 PES1O00541 588 aaKnown RBP16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 HEXIM1O94992 359 aaKnown RBP16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 PEX19P40855 299 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 PHKA1P46020 1223 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 RWDD2BP57060 319 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 ZBED6P86452 979 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 TMEM67Q5HYA8 995 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 ZNF658Q5TYW1 1059 aaPredicted RBP16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 MSL1Q68DK7 614 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 MAATS1Q7Z4T9 603 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 PARD3BQ8TEW8 1205 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 CCDC47Q96A33 483 aaKnown RBP16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 PLA2G12BQ9BX93 195 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 BSDC1Q9NW68 430 aaPredicted RBP16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 ATRNO75882 1429 aa16.2■□□□□ 0.18
VPS9D1-201ENST00000389386 USO1O60763 962 aaKnown RBP16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 IDH1O75874 414 aaKnown RBP16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 CDK17Q00537 523 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 SPA17Q15506 151 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 CAPRIN2Q6IMN6 1127 aaKnown RBP16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 HIBCHQ6NVY1 386 aaPredicted RBP16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 INTS5Q6P9B9 1019 aaKnown RBP16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 WHAMMQ8TF30 809 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 SPAG5Q96R06 1193 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 MTRQ99707 1265 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 MAPK8IP1Q9UQF2 711 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 ANP32DO95626 131 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 SRGNP10124 158 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 EEF1GP26641 437 aaKnown RBP16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 HSPA9P38646 679 aaKnown RBP16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 PRCPP42785 496 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 DNM2P50570 870 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 CASKIN2Q8WXE0 1202 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 PLCB1Q9NQ66 1216 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 SLC12A7Q9Y666 1083 aa16.19■□□□□ 0.18
VPS9D1-201ENST00000389386 FAM205CA6NFA0 338 aa16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 BACH1O14867 736 aa16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 NCK2O43639 380 aa16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 TMOD1P28289 359 aa16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 PPARDQ03181 441 aa16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 RIPK1Q13546 671 aa16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 LRIG3Q6UXM1 1119 aa16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 RAPGEF5Q92565 580 aa16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 FERMT2Q96AC1 680 aa16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 PCDHA13Q9Y5I0 950 aa16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 NUP98P52948 1817 aa16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 MYH14Q7Z406 1995 aaKnown RBP16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 GOLGA6L10A6NI86 522 aa16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 SMNDC1O75940 238 aaKnown RBP eCLIP16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 SNUPNO95149 360 aaKnown RBP16.18■□□□□ 0.18
VPS9D1-201ENST00000389386 PAEPP09466 180 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms