RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 ARFGAP3Q9NP61 516 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 TTF2Q9UNY4 1162 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 GPR75-ASB3A0A0A6YYF3 556 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 SLC37A4O43826 429 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 SERPINB2P05120 415 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 AKR1B1P15121 316 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 TRIM21P19474 475 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 RDXP35241 583 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 MTIF2P46199 727 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 MCM6Q14566 821 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 UBE2SQ16763 222 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 FOXR1Q6PIV2 292 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 WDR59Q6PJI9 974 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 GBP6Q6ZN66 633 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 CNOT6LQ96LI5 555 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 NAPGQ99747 312 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 NUDT12Q9BQG2 462 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 ANKZF1Q9H8Y5 726 aa13.04□□□□□ -0.32
RAPGEF3-201ENST00000389212 SLC16A2P36021 539 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 LIG3P49916 1009 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 SCNN1DP51172 638 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 CYP27A1Q02318 531 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 TBC1D8BQ0IIM8 1120 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 KRT25Q7Z3Z0 450 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 REXO1Q8N1G1 1221 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 NOA1Q8NC60 698 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 OR8K1Q8NGG5 319 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 UBAP1LF5GYI3 381 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 NBPF20Q3BBV1 942 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 TTBK2Q6IQ55 1244 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 GLIS3Q8NEA6 775 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 ZNF507Q8TCN5 953 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 SPZ1Q9BXG8 430 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 COL24A1Q17RW2 1714 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 RASSF10A6NK89 507 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 IDEP14735 1019 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 TNNI2P48788 182 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 HERVK_113P62684 666 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 KCNB1Q14721 858 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 LONRF2Q1L5Z9 754 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 MMS22LQ6ZRQ5 1243 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 KIAA0895Q8NCT3 520 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 TBC1D16Q8TBP0 767 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 P2RX5Q93086 422 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 CAPZA3Q96KX2 299 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 HINFPQ9BQA5 517 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 RABEP2Q9H5N1 569 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 ADAM21Q9UKJ8 722 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 DUSP10Q9Y6W6 482 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 MAST2Q6P0Q8 1798 aa13.03□□□□□ -0.32
RAPGEF3-201ENST00000389212 NAV1Q8NEY1 1877 aa13.02□□□□□ -0.32
RAPGEF3-201ENST00000389212 PPP1R12AO14974 1030 aaPredicted RBP13.02□□□□□ -0.32
RAPGEF3-201ENST00000389212 TOM1O60784 492 aa13.02□□□□□ -0.32
RAPGEF3-201ENST00000389212 PDHBP11177 359 aa13.02□□□□□ -0.32
RAPGEF3-201ENST00000389212 FECHP22830 423 aa13.02□□□□□ -0.32
RAPGEF3-201ENST00000389212 ACTN2P35609 894 aa13.02□□□□□ -0.32
RAPGEF3-201ENST00000389212 LRRC41Q15345 812 aa13.02□□□□□ -0.32
RAPGEF3-201ENST00000389212 CENPHQ9H3R5 247 aa13.02□□□□□ -0.32
RAPGEF3-201ENST00000389212 DDX4Q9NQI0 724 aaKnown RBP13.02□□□□□ -0.32
RAPGEF3-201ENST00000389212 DAGLAQ9Y4D2 1042 aa13.02□□□□□ -0.32
RAPGEF3-201ENST00000389212 RCCD1A6NED2 376 aa13.02□□□□□ -0.33
RAPGEF3-201ENST00000389212 FAM196BA6NMK8 535 aa13.02□□□□□ -0.33
RAPGEF3-201ENST00000389212 PLEKP08567 350 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF3-201ENST00000389212 GYS1P13807 737 aa13.02□□□□□ -0.33
RAPGEF3-201ENST00000389212 GNA11P29992 359 aa13.02□□□□□ -0.33
RAPGEF3-201ENST00000389212 SHROOM1Q2M3G4 852 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF3-201ENST00000389212 CCDC122Q5T0U0 273 aa13.02□□□□□ -0.33
RAPGEF3-201ENST00000389212 NOC4LQ9BVI4 516 aaKnown RBP13.02□□□□□ -0.33
RAPGEF3-201ENST00000389212 IVLP07476 585 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 KRT26Q7Z3Y9 468 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 FUT8Q9BYC5 575 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 LACRTQ9GZZ8 138 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 THAP9Q9H5L6 903 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 MYMKA6NI61 221 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 CCNE1P24864 410 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 GRB10Q13322 594 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 CALCRLQ16602 461 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 TSR1Q2NL82 804 aaKnown RBP13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 GALNT17Q6IS24 598 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 KCNK18Q7Z418 384 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 KIAA1328Q86T90 577 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 SEMA6BQ9H3T3 888 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 LRWD1Q9UFC0 647 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 DDX60LQ5H9U9 1706 aaKnown RBP13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 MACROD2A1Z1Q3 448 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 EDIL3O43854 480 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 ATP1A1P05023 1023 aaKnown RBP13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 ATP2B4P23634 1241 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 EEF1GP26641 437 aaKnown RBP13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 TRIM14Q14142 442 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 KCTD1Q719H9 257 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 CEP112Q8N8E3 955 aa13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 CPSF2Q9P2I0 782 aaKnown RBP13.01□□□□□ -0.33
RAPGEF3-201ENST00000389212 EPHB6O15197 1021 aa13□□□□□ -0.33
RAPGEF3-201ENST00000389212 SSBP05455 408 aaKnown RBP eCLIP13□□□□□ -0.33
RAPGEF3-201ENST00000389212 PRPHP41219 470 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms