RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 NDEL1Q9GZM8 345 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 EPC1Q9H2F5 836 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 PAG1Q9NWQ8 432 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 RNF14Q9UBS8 474 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 ANAPC5Q9UJX4 755 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 CCDC194A0A1B0GVG4 234 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 SOWAHDA6NJG2 315 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 EIF4BP23588 611 aaKnown RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 MTIF2P46199 727 aaKnown RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 CFAP221Q4G0U5 840 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 AMOTQ4VCS5 1084 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 GBP7Q8N8V2 638 aaPredicted RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 ABTB2Q8N961 1025 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 C3orf20Q8ND61 904 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 SAAL1Q96ER3 474 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 C8orf37Q96NL8 207 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 FAM167BQ9BTA0 163 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 A1CFQ9NQ94 594 aaKnown RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 CWC25Q9NXE8 425 aaPredicted RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 TMOD2Q9NZR1 351 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 SCHIP1Q9P0W5 487 aaPredicted RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 PA2G4Q9UQ80 394 aaKnown RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 TBX22Q9Y458 520 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 KDRP35968 1356 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 GRK2P25098 689 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 PDIA3P30101 505 aaKnown RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 RBL2Q08999 1139 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 DPYDQ12882 1025 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 NNTQ13423 1086 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 ZNF530Q6P9A1 599 aaPredicted RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 TRIM7Q9C029 511 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 VCXQ9H320 206 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 ZBTB3Q9H5J0 574 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 PLCB1Q9NQ66 1216 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 SAMM50Q9Y512 469 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 EPN1Q9Y6I3 576 aaPredicted RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 ANKRD26Q9UPS8 1709 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 PNMA6FA0A0J9YX94 578 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 E7EWF7 191 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 ATP2C2O75185 946 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 GMNNO75496 209 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 MBD4O95243 580 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 KCNA6P17658 529 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 CASP2P42575 452 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 PAK1Q13153 545 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 CIAPIN1Q6FI81 312 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 CCDC81Q6ZN84 652 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 KBTBD3Q8NAB2 608 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 HELQQ8TDG4 1101 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 TRIM47Q96LD4 638 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 UBAC1Q9BSL1 405 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 NCOA5Q9HCD5 579 aaKnown RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 SSU72Q9NP77 194 aaKnown RBP6.25□□□□□ -1.41
RFC1-202ENST00000381897 CEP126Q9P2H0 1117 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 TUBE1Q9UJT0 475 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 CTNND2Q9UQB3 1225 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 KIF20BQ96Q89 1820 aa6.25□□□□□ -1.41
RFC1-202ENST00000381897 IRAK1P51617 712 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 YARSP54577 528 aaKnown RBP6.24□□□□□ -1.41
RFC1-202ENST00000381897 PSMC1P62191 440 aaKnown RBP6.24□□□□□ -1.41
RFC1-202ENST00000381897 IFT88Q13099 833 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 IL31Q6EBC2 164 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 RASGRP2Q7LDG7 609 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 PCSK9Q8NBP7 692 aaKnown RBP6.24□□□□□ -1.41
RFC1-202ENST00000381897 MIPOL1Q8TD10 442 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 STK32AQ8WU08 396 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 YME1L1Q96TA2 773 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 UBXN6Q9BZV1 441 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 DCTN4Q9UJW0 460 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 PCDHA5Q9Y5H7 936 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 SH3TC1Q8TE82 1336 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 DEPDC5O75140 1603 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 CAMSAP1Q5T5Y3 1602 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 ANKRD65E5RJM6 399 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 POLR2DO15514 142 aaKnown RBP6.24□□□□□ -1.41
RFC1-202ENST00000381897 PARNO95453 639 aaKnown RBP6.24□□□□□ -1.41
RFC1-202ENST00000381897 FKBP4Q02790 459 aaKnown RBP eCLIP6.24□□□□□ -1.41
RFC1-202ENST00000381897 GOLGA8FQ08AF8 430 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 PTPN21Q16825 1174 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 BEND3Q5T5X7 828 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 RESP18Q5W5W9 173 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 PRR23CQ6ZRP0 262 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 USP33Q8TEY7 942 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 PSPC1Q8WXF1 523 aaKnown RBP6.24□□□□□ -1.41
RFC1-202ENST00000381897 IFT81Q8WYA0 676 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 TMEM87BQ96K49 555 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 MAK16Q9BXY0 300 aaKnown RBP6.24□□□□□ -1.41
RFC1-202ENST00000381897 ABCG4Q9H172 646 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 TAOK3Q9H2K8 898 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 KAT14Q9H8E8 782 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 STARD7Q9NQZ5 370 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 EIF2B3Q9NR50 452 aaKnown RBP6.24□□□□□ -1.41
RFC1-202ENST00000381897 BSDC1Q9NW68 430 aaPredicted RBP6.24□□□□□ -1.41
RFC1-202ENST00000381897 BAIAP2L1Q9UHR4 511 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 SCAF8Q9UPN6 1271 aaKnown RBP6.24□□□□□ -1.41
RFC1-202ENST00000381897 CDHR2Q9BYE9 1310 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 PPP1R12BO60237 982 aaPredicted RBP6.24□□□□□ -1.41
RFC1-202ENST00000381897 NR1D1P20393 614 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 CASP14P31944 242 aa6.24□□□□□ -1.41
RFC1-202ENST00000381897 AFMP43652 599 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms