RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SCG2P13521 617 aa22.31■■□□□ 1.16
GTF3A-201ENST00000381140 GHRHRQ02643 423 aa22.31■■□□□ 1.16
GTF3A-201ENST00000381140 SSRP1Q08945 709 aaKnown RBP22.31■■□□□ 1.16
GTF3A-201ENST00000381140 PFKFB3Q16875 520 aaPredicted RBP22.31■■□□□ 1.16
GTF3A-201ENST00000381140 TRIM22Q8IYM9 498 aa22.31■■□□□ 1.16
GTF3A-201ENST00000381140 SAMD3Q8N6K7 520 aa22.31■■□□□ 1.16
GTF3A-201ENST00000381140 NECAB1Q8N987 351 aa22.31■■□□□ 1.16
GTF3A-201ENST00000381140 KATNBL1Q9H079 304 aa22.31■■□□□ 1.16
GTF3A-201ENST00000381140 PXMP2Q9NR77 195 aa22.31■■□□□ 1.16
GTF3A-201ENST00000381140 PDGFCQ9NRA1 345 aa22.31■■□□□ 1.16
GTF3A-201ENST00000381140 MAP3K20Q9NYL2 800 aaKnown RBP22.31■■□□□ 1.16
GTF3A-201ENST00000381140 BRCA2P51587 3418 aa22.3■■□□□ 1.16
GTF3A-201ENST00000381140 PFKFB2O60825 505 aa22.3■■□□□ 1.16
GTF3A-201ENST00000381140 FARP2O94887 1054 aaPredicted RBP22.3■■□□□ 1.16
GTF3A-201ENST00000381140 RARBP10826 455 aa22.3■■□□□ 1.16
GTF3A-201ENST00000381140 ANP32AP39687 249 aaKnown RBP22.3■■□□□ 1.16
GTF3A-201ENST00000381140 UBE2SQ16763 222 aa22.3■■□□□ 1.16
GTF3A-201ENST00000381140 ME3Q16798 604 aa22.3■■□□□ 1.16
GTF3A-201ENST00000381140 TYW1BQ6NUM6 668 aa22.3■■□□□ 1.16
GTF3A-201ENST00000381140 MORC4Q8TE76 937 aa22.3■■□□□ 1.16
GTF3A-201ENST00000381140 RNF26Q9BY78 433 aaPredicted RBP22.3■■□□□ 1.16
GTF3A-201ENST00000381140 RBM27Q9P2N5 1060 aaKnown RBP22.3■■□□□ 1.16
GTF3A-201ENST00000381140 OGDHLQ9ULD0 1010 aa22.3■■□□□ 1.16
GTF3A-201ENST00000381140 LOC102724159A0A0B4J2E5 919 aa22.29■■□□□ 1.16
GTF3A-201ENST00000381140 MYCLP12524 364 aaPredicted RBP22.29■■□□□ 1.16
GTF3A-201ENST00000381140 ADCYAP1R1P41586 468 aa22.29■■□□□ 1.16
GTF3A-201ENST00000381140 PWP2Q15269 919 aaKnown RBP22.29■■□□□ 1.16
GTF3A-201ENST00000381140 VTA1Q9NP79 307 aa22.29■■□□□ 1.16
GTF3A-201ENST00000381140 BARHL2Q9NY43 387 aa22.29■■□□□ 1.16
GTF3A-201ENST00000381140 MYH7BA7E2Y1 1941 aa22.29■■□□□ 1.16
GTF3A-201ENST00000381140 hCG_1984214I3L0E3 225 aa22.28■■□□□ 1.16
GTF3A-201ENST00000381140 EDNRBP24530 442 aa22.28■■□□□ 1.16
GTF3A-201ENST00000381140 ADCY7P51828 1080 aa22.28■■□□□ 1.16
GTF3A-201ENST00000381140 RABEP1Q15276 862 aa22.28■■□□□ 1.16
GTF3A-201ENST00000381140 PKN1Q16512 942 aa22.28■■□□□ 1.16
GTF3A-201ENST00000381140 PPP1R18Q6NYC8 613 aa22.28■■□□□ 1.16
GTF3A-201ENST00000381140 ZNF713Q8N859 430 aaPredicted RBP22.28■■□□□ 1.16
GTF3A-201ENST00000381140 DIS3LQ8TF46 1054 aaKnown RBP22.28■■□□□ 1.16
GTF3A-201ENST00000381140 XPNPEP3Q9NQH7 507 aa22.28■■□□□ 1.16
GTF3A-201ENST00000381140 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.27■■□□□ 1.16
GTF3A-201ENST00000381140 SMCO2A6NFE2 343 aa22.27■■□□□ 1.16
GTF3A-201ENST00000381140 MEIS2O14770 477 aa22.27■■□□□ 1.16
GTF3A-201ENST00000381140 ADCY6O43306 1168 aa22.27■■□□□ 1.16
GTF3A-201ENST00000381140 CDKL5O76039 1030 aa22.27■■□□□ 1.16
GTF3A-201ENST00000381140 PGK1P00558 417 aa22.27■■□□□ 1.16
GTF3A-201ENST00000381140 NR3C2P08235 984 aa22.27■■□□□ 1.16
GTF3A-201ENST00000381140 TNFAIP2Q03169 654 aa22.27■■□□□ 1.16
GTF3A-201ENST00000381140 GJC2Q5T442 439 aaPredicted RBP22.27■■□□□ 1.16
GTF3A-201ENST00000381140 TAPT1Q6NXT6 567 aa22.27■■□□□ 1.16
GTF3A-201ENST00000381140 IL31RAQ8NI17 732 aa22.27■■□□□ 1.16
GTF3A-201ENST00000381140 ZFP91Q96JP5 570 aaPredicted RBP22.27■■□□□ 1.16
GTF3A-201ENST00000381140 IWS1Q96ST2 819 aa22.27■■□□□ 1.16
GTF3A-201ENST00000381140 RGS19P49795 217 aa22.26■■□□□ 1.15
GTF3A-201ENST00000381140 PGM5Q15124 567 aa22.26■■□□□ 1.15
GTF3A-201ENST00000381140 STXBP2Q15833 593 aa22.26■■□□□ 1.15
GTF3A-201ENST00000381140 SEPT14Q6ZU15 432 aa22.26■■□□□ 1.15
GTF3A-201ENST00000381140 GTF3C6Q969F1 213 aa22.26■■□□□ 1.15
GTF3A-201ENST00000381140 PAWRQ96IZ0 340 aaKnown RBP22.26■■□□□ 1.15
GTF3A-201ENST00000381140 PDCD2LQ9BRP1 358 aa22.26■■□□□ 1.15
GTF3A-201ENST00000381140 LIMCH1Q9UPQ0 1083 aa22.26■■□□□ 1.15
GTF3A-201ENST00000381140 PIK3CDO00329 1044 aa22.25■■□□□ 1.15
GTF3A-201ENST00000381140 PTGS1P23219 599 aa22.25■■□□□ 1.15
GTF3A-201ENST00000381140 ANKLE1Q8NAG6 615 aa22.25■■□□□ 1.15
GTF3A-201ENST00000381140 ARRDC4Q8NCT1 418 aa22.25■■□□□ 1.15
GTF3A-201ENST00000381140 RIC8AQ9NPQ8 531 aa22.25■■□□□ 1.15
GTF3A-201ENST00000381140 VPS54Q9P1Q0 977 aa22.25■■□□□ 1.15
GTF3A-201ENST00000381140 SPDYE3A6NKU9 549 aa22.25■■□□□ 1.15
GTF3A-201ENST00000381140 SMPD1P17405 629 aa22.25■■□□□ 1.15
GTF3A-201ENST00000381140 CCND2P30279 289 aa22.25■■□□□ 1.15
GTF3A-201ENST00000381140 MLLT1Q03111 559 aaPredicted RBP22.25■■□□□ 1.15
GTF3A-201ENST00000381140 TMEM63BQ5T3F8 832 aa22.25■■□□□ 1.15
GTF3A-201ENST00000381140 IQSEC1Q6DN90 963 aa22.25■■□□□ 1.15
GTF3A-201ENST00000381140 CCDC12Q8WUD4 166 aaPredicted RBP22.25■■□□□ 1.15
GTF3A-201ENST00000381140 WDR11Q9BZH6 1224 aa22.25■■□□□ 1.15
GTF3A-201ENST00000381140 SYNRGQ9UMZ2 1314 aa22.24■■□□□ 1.15
GTF3A-201ENST00000381140 DOCK5Q9H7D0 1870 aa22.24■■□□□ 1.15
GTF3A-201ENST00000381140 KBTBD13C9JR72 458 aa22.24■■□□□ 1.15
GTF3A-201ENST00000381140 ST18O60284 1047 aa22.24■■□□□ 1.15
GTF3A-201ENST00000381140 DUSP11O75319 330 aaKnown RBP22.24■■□□□ 1.15
GTF3A-201ENST00000381140 DEXIO95424 95 aa22.24■■□□□ 1.15
GTF3A-201ENST00000381140 CAPN2P17655 700 aa22.24■■□□□ 1.15
GTF3A-201ENST00000381140 NECAB2Q7Z6G3 386 aa22.24■■□□□ 1.15
GTF3A-201ENST00000381140 PGBD1Q96JS3 809 aa22.24■■□□□ 1.15
GTF3A-201ENST00000381140 AIFM3Q96NN9 605 aa22.24■■□□□ 1.15
GTF3A-201ENST00000381140 C6orf50Q9HD87 102 aa22.24■■□□□ 1.15
GTF3A-201ENST00000381140 TMEM260Q9NX78 707 aa22.24■■□□□ 1.15
GTF3A-201ENST00000381140 CTDNEP1O95476 244 aa22.23■■□□□ 1.15
GTF3A-201ENST00000381140 C6orf222P0C671 652 aaPredicted RBP22.23■■□□□ 1.15
GTF3A-201ENST00000381140 MNX1P50219 401 aaPredicted RBP22.23■■□□□ 1.15
GTF3A-201ENST00000381140 IRX5P78411 483 aaPredicted RBP22.23■■□□□ 1.15
GTF3A-201ENST00000381140 LRRC41Q15345 812 aa22.23■■□□□ 1.15
GTF3A-201ENST00000381140 RNF180Q86T96 592 aa22.23■■□□□ 1.15
GTF3A-201ENST00000381140 TLK2Q86UE8 772 aa22.23■■□□□ 1.15
GTF3A-201ENST00000381140 CCDC83Q8IWF9 413 aa22.23■■□□□ 1.15
GTF3A-201ENST00000381140 CCDC148Q8NFR7 591 aa22.23■■□□□ 1.15
GTF3A-201ENST00000381140 SCFD2Q8WU76 684 aa22.23■■□□□ 1.15
GTF3A-201ENST00000381140 SPC25Q9HBM1 224 aa22.23■■□□□ 1.15
GTF3A-201ENST00000381140 PCDHA6Q9UN73 950 aa22.23■■□□□ 1.15
GTF3A-201ENST00000381140 PCDHA8Q9Y5H6 950 aa22.23■■□□□ 1.15
GTF3A-201ENST00000381140 ALPK3Q96L96 1907 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms