RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 LHX8Q68G74 356 aa22.97■■□□□ 1.27
CDPF1-202ENST00000381037 NSUN6Q8TEA1 469 aaKnown RBP22.97■■□□□ 1.27
CDPF1-202ENST00000381037 ZMYND12Q9H0C1 365 aa22.97■■□□□ 1.27
CDPF1-202ENST00000381037 PXMP2Q9NR77 195 aa22.97■■□□□ 1.27
CDPF1-202ENST00000381037 CNPY2Q9Y2B0 182 aa22.97■■□□□ 1.27
CDPF1-202ENST00000381037 MCM3APO60318 1980 aa22.97■■□□□ 1.27
CDPF1-202ENST00000381037 SMCO2A6NFE2 343 aa22.97■■□□□ 1.27
CDPF1-202ENST00000381037 ACVR2BQ13705 512 aa22.97■■□□□ 1.27
CDPF1-202ENST00000381037 IWS1Q96ST2 819 aa22.97■■□□□ 1.27
CDPF1-202ENST00000381037 FRMPD4Q14CM0 1322 aa22.96■■□□□ 1.27
CDPF1-202ENST00000381037 POTEFA5A3E0 1075 aa22.96■■□□□ 1.27
CDPF1-202ENST00000381037 SEPT4O43236 478 aa22.96■■□□□ 1.27
CDPF1-202ENST00000381037 CUL5Q93034 780 aa22.96■■□□□ 1.27
CDPF1-202ENST00000381037 AIFM3Q96NN9 605 aa22.96■■□□□ 1.27
CDPF1-202ENST00000381037 DEFB118Q96PH6 123 aa22.96■■□□□ 1.27
CDPF1-202ENST00000381037 TMEM106CQ9BVX2 250 aa22.96■■□□□ 1.27
CDPF1-202ENST00000381037 SH3GLB2Q9NR46 395 aa22.96■■□□□ 1.27
CDPF1-202ENST00000381037 ADAMTS3O15072 1205 aa22.95■■□□□ 1.26
CDPF1-202ENST00000381037 GJA8P48165 433 aa22.95■■□□□ 1.26
CDPF1-202ENST00000381037 MRPL12P52815 198 aaKnown RBP22.95■■□□□ 1.26
CDPF1-202ENST00000381037 FCHSD1Q86WN1 690 aa22.95■■□□□ 1.26
CDPF1-202ENST00000381037 PDCD2LQ9BRP1 358 aa22.95■■□□□ 1.26
CDPF1-202ENST00000381037 CRISPLD2Q9H0B8 497 aa22.95■■□□□ 1.26
CDPF1-202ENST00000381037 SGPL1O95470 568 aa22.94■■□□□ 1.26
CDPF1-202ENST00000381037 MCM2P49736 904 aa22.94■■□□□ 1.26
CDPF1-202ENST00000381037 CLK2P49760 499 aaKnown RBP22.94■■□□□ 1.26
CDPF1-202ENST00000381037 UBE2SQ16763 222 aa22.94■■□□□ 1.26
CDPF1-202ENST00000381037 TAPT1Q6NXT6 567 aa22.94■■□□□ 1.26
CDPF1-202ENST00000381037 CCDC83Q8IWF9 413 aa22.94■■□□□ 1.26
CDPF1-202ENST00000381037 SMARCC2Q8TAQ2 1214 aa22.94■■□□□ 1.26
CDPF1-202ENST00000381037 U2AF1L4Q8WU68 220 aaKnown RBP22.94■■□□□ 1.26
CDPF1-202ENST00000381037 TMX3Q96JJ7 454 aa22.94■■□□□ 1.26
CDPF1-202ENST00000381037 VPS54Q9P1Q0 977 aa22.94■■□□□ 1.26
CDPF1-202ENST00000381037 DDX20Q9UHI6 824 aaKnown RBP22.94■■□□□ 1.26
CDPF1-202ENST00000381037 MKI67P46013 3256 aaKnown RBP22.94■■□□□ 1.26
CDPF1-202ENST00000381037 JAK2O60674 1132 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 NR3C2P08235 984 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 EIF2AK2P19525 551 aaKnown RBP22.93■■□□□ 1.26
CDPF1-202ENST00000381037 ADCY7P51828 1080 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 ARHGEF16Q5VV41 709 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 VSIG10LQ86VR7 867 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 IL31RAQ8NI17 732 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 CCDC12Q8WUD4 166 aaPredicted RBP22.93■■□□□ 1.26
CDPF1-202ENST00000381037 LLPHQ9BRT6 129 aaKnown RBP22.93■■□□□ 1.26
CDPF1-202ENST00000381037 VTA1Q9NP79 307 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 ORC3Q9UBD5 711 aaPredicted RBP22.93■■□□□ 1.26
CDPF1-202ENST00000381037 LRRC37A2A6NM11 1700 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 ADCY6O43306 1168 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 CNGA1P29973 690 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 PDE4DQ08499 809 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 PGM5Q15124 567 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 CCDC144BQ3MJ40 725 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 FBXO16Q8IX29 292 aaPredicted RBP22.93■■□□□ 1.26
CDPF1-202ENST00000381037 FAM177A1Q8N128 213 aaPredicted RBP22.93■■□□□ 1.26
CDPF1-202ENST00000381037 MPHOSPH6Q99547 160 aaKnown RBP22.93■■□□□ 1.26
CDPF1-202ENST00000381037 GLT8D2Q9H1C3 349 aa22.93■■□□□ 1.26
CDPF1-202ENST00000381037 ZHX1Q9UKY1 873 aaPredicted RBP22.93■■□□□ 1.26
CDPF1-202ENST00000381037 RBM47A0AV96 593 aaKnown RBP22.92■■□□□ 1.26
CDPF1-202ENST00000381037 B4DLN1 442 aa22.92■■□□□ 1.26
CDPF1-202ENST00000381037 MSCO60682 206 aa22.92■■□□□ 1.26
CDPF1-202ENST00000381037 NPY5RQ15761 445 aa22.92■■□□□ 1.26
CDPF1-202ENST00000381037 EEPD1Q7L9B9 569 aa22.92■■□□□ 1.26
CDPF1-202ENST00000381037 PDGFCQ9NRA1 345 aa22.92■■□□□ 1.26
CDPF1-202ENST00000381037 OGDHLQ9ULD0 1010 aa22.92■■□□□ 1.26
CDPF1-202ENST00000381037 AKR1A1P14550 325 aa22.91■■□□□ 1.26
CDPF1-202ENST00000381037 SOX10P56693 466 aa22.91■■□□□ 1.26
CDPF1-202ENST00000381037 STXBP2Q15833 593 aa22.91■■□□□ 1.26
CDPF1-202ENST00000381037 CCDC148Q8NFR7 591 aa22.91■■□□□ 1.26
CDPF1-202ENST00000381037 C6orf50Q9HD87 102 aa22.91■■□□□ 1.26
CDPF1-202ENST00000381037 FAM184BQ9ULE4 1060 aa22.91■■□□□ 1.26
CDPF1-202ENST00000381037 EIF3JO75822 258 aaKnown RBP22.9■■□□□ 1.26
CDPF1-202ENST00000381037 EN2P19622 333 aaPredicted RBP22.9■■□□□ 1.26
CDPF1-202ENST00000381037 GJB4Q9NTQ9 266 aa22.9■■□□□ 1.26
CDPF1-202ENST00000381037 PCDHA6Q9UN73 950 aa22.9■■□□□ 1.26
CDPF1-202ENST00000381037 PCDHA8Q9Y5H6 950 aa22.9■■□□□ 1.26
CDPF1-202ENST00000381037 RGS20O76081 388 aa22.9■■□□□ 1.26
CDPF1-202ENST00000381037 GNA11P29992 359 aa22.9■■□□□ 1.26
CDPF1-202ENST00000381037 ADCYAP1R1P41586 468 aa22.9■■□□□ 1.26
CDPF1-202ENST00000381037 MRPS9P82933 396 aaKnown RBP22.9■■□□□ 1.26
CDPF1-202ENST00000381037 TMEM63BQ5T3F8 832 aa22.9■■□□□ 1.26
CDPF1-202ENST00000381037 TMEM260Q9NX78 707 aa22.9■■□□□ 1.26
CDPF1-202ENST00000381037 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.89■■□□□ 1.25
CDPF1-202ENST00000381037 SPDYE3A6NKU9 549 aa22.89■■□□□ 1.25
CDPF1-202ENST00000381037 FOSP01100 380 aaPredicted RBP22.89■■□□□ 1.25
CDPF1-202ENST00000381037 CAPN2P17655 700 aa22.89■■□□□ 1.25
CDPF1-202ENST00000381037 ANO1Q5XXA6 986 aa22.89■■□□□ 1.25
CDPF1-202ENST00000381037 IQSEC1Q6DN90 963 aa22.89■■□□□ 1.25
CDPF1-202ENST00000381037 M0R2N6 131 aa22.88■■□□□ 1.25
CDPF1-202ENST00000381037 MNX1P50219 401 aaPredicted RBP22.88■■□□□ 1.25
CDPF1-202ENST00000381037 AP3B2Q13367 1082 aa22.88■■□□□ 1.25
CDPF1-202ENST00000381037 PCNX4Q63HM2 1172 aa22.88■■□□□ 1.25
CDPF1-202ENST00000381037 CRYGNQ8WXF5 182 aa22.88■■□□□ 1.25
CDPF1-202ENST00000381037 WASF1Q92558 559 aa22.88■■□□□ 1.25
CDPF1-202ENST00000381037 LENG1Q96BZ8 264 aaPredicted RBP22.88■■□□□ 1.25
CDPF1-202ENST00000381037 ALG1Q9BT22 464 aa22.88■■□□□ 1.25
CDPF1-202ENST00000381037 PHF20Q9BVI0 1012 aa22.88■■□□□ 1.25
CDPF1-202ENST00000381037 GNEQ9Y223 722 aaKnown RBP22.88■■□□□ 1.25
CDPF1-202ENST00000381037 MYCLP12524 364 aaPredicted RBP22.87■■□□□ 1.25
CDPF1-202ENST00000381037 SMPD1P17405 629 aa22.87■■□□□ 1.25
CDPF1-202ENST00000381037 CCND2P30279 289 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms