RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 CCNE1P24864 410 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 STAT3P40763 770 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 SSR1P43307 286 aaKnown RBP13.88□□□□□ -0.19
CDX2-201ENST00000381020 MAGEA1P43355 309 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 FAM83BQ5T0W9 1011 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 CCDC94Q9BW85 323 aaPredicted RBP13.88□□□□□ -0.19
CDX2-201ENST00000381020 TESPA1A2RU30 521 aaPredicted RBP13.88□□□□□ -0.19
CDX2-201ENST00000381020 CCDC169A6NNP5 214 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 ENC1O14682 589 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 PTPROQ16827 1216 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 TAF3Q5VWG9 929 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 CEP112Q8N8E3 955 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 CUEDC2Q9H467 287 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 PALM3A6NDB9 673 aaPredicted RBP13.88□□□□□ -0.19
CDX2-201ENST00000381020 PHACTR2O75167 634 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 CYP27A1Q02318 531 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 ADAM9Q13443 819 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 KRT222Q8N1A0 295 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 DHTKD1Q96HY7 919 aaPredicted RBP13.88□□□□□ -0.19
CDX2-201ENST00000381020 NUP58Q9BVL2 599 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 DDX4Q9NQI0 724 aaKnown RBP13.88□□□□□ -0.19
CDX2-201ENST00000381020 KDM3AQ9Y4C1 1321 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 WNT7AO00755 349 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 CYTH3O43739 400 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 DPYDQ12882 1025 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 EZH2Q15910 746 aaKnown RBP13.87□□□□□ -0.19
CDX2-201ENST00000381020 E4F1Q66K89 784 aaPredicted RBP13.87□□□□□ -0.19
CDX2-201ENST00000381020 NAA15Q9BXJ9 866 aaKnown RBP13.87□□□□□ -0.19
CDX2-201ENST00000381020 IRX2Q9BZI1 471 aaPredicted RBP13.87□□□□□ -0.19
CDX2-201ENST00000381020 POTEB3A0JP26 581 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 POTECB2RU33 542 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 EPB41P11171 864 aaKnown RBP13.87□□□□□ -0.19
CDX2-201ENST00000381020 STRIP1Q5VSL9 837 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 LRCH2Q5VUJ6 765 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 POTEBQ6S5H4 581 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 DEFB132Q7Z7B7 95 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 SLFN12Q8IYM2 578 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 GBP3Q9H0R5 595 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 DISP2A7MBM2 1401 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 A0A087X0B3 334 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 PLA2G4BP0C869 781 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 CYP2J2P51589 502 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 NCAPHQ15003 741 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 PIGOQ8TEQ8 1089 aa13.87□□□□□ -0.19
CDX2-201ENST00000381020 TRPM3Q9HCF6 1732 aaPredicted RBP13.87□□□□□ -0.19
CDX2-201ENST00000381020 PARP4Q9UKK3 1724 aaKnown RBP13.86□□□□□ -0.19
CDX2-201ENST00000381020 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
CDX2-201ENST00000381020 HLTFQ14527 1009 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDX2-201ENST00000381020 SLC35F6Q8N357 371 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 BHMT2Q9H2M3 363 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 PLEKHA4Q9H4M7 779 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 JMJD4Q9H9V9 463 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 MRPL11Q9Y3B7 192 aaKnown RBP13.86□□□□□ -0.19
CDX2-201ENST00000381020 C5P01031 1676 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 ALS2Q96Q42 1657 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 FOSP01100 380 aaPredicted RBP13.86□□□□□ -0.19
CDX2-201ENST00000381020 IL1R1P14778 569 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 EEF1GP26641 437 aaKnown RBP13.86□□□□□ -0.19
CDX2-201ENST00000381020 IFIH1Q9BYX4 1025 aaKnown RBP13.86□□□□□ -0.19
CDX2-201ENST00000381020 ZMYND12Q9H0C1 365 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 STK17AQ9UEE5 414 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 PCDHAC2Q9Y5I4 1007 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 hCG_1984214I3L0E3 225 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 GCFC2P16383 781 aaKnown RBP13.86□□□□□ -0.19
CDX2-201ENST00000381020 POLR2FP61218 127 aaKnown RBP13.86□□□□□ -0.19
CDX2-201ENST00000381020 ARHGAP4P98171 946 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 STK4Q13043 487 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 ZNF713Q8N859 430 aaPredicted RBP13.86□□□□□ -0.19
CDX2-201ENST00000381020 CCDC51Q96ER9 411 aa13.86□□□□□ -0.19
CDX2-201ENST00000381020 LSM14BQ9BX40 385 aaKnown RBP13.86□□□□□ -0.19
CDX2-201ENST00000381020 CLIC2O15247 247 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 EXOC3O60645 756 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 NDUFB10O96000 172 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 ZFPM1Q8IX07 1006 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 GDAP1L1Q96MZ0 367 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 TRERF1Q96PN7 1200 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 ZNF341Q9BYN7 854 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 PHRF1Q9P1Y6 1649 aaKnown RBP13.85□□□□□ -0.19
CDX2-201ENST00000381020 POTEFA5A3E0 1075 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 DDTLA6NHG4 134 aaPredicted RBP13.85□□□□□ -0.19
CDX2-201ENST00000381020 POTEIP0CG38 1075 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 NT5C2P49902 561 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 CTTNQ14247 550 aaKnown RBP13.85□□□□□ -0.19
CDX2-201ENST00000381020 POTEGQ6S5H5 508 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 POTEEQ6S8J3 1075 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 HHIPL2Q6UWX4 724 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 PRMT6Q96LA8 375 aaPredicted RBP13.85□□□□□ -0.19
CDX2-201ENST00000381020 TCHPQ9BT92 498 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 TRIM9Q9C026 710 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 ARMCX3Q9UH62 379 aaPredicted RBP13.85□□□□□ -0.19
CDX2-201ENST00000381020 FRMD4BQ9Y2L6 1034 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 SUGT1Q9Y2Z0 365 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 RABGAP1Q9Y3P9 1069 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 IBSPP21815 317 aaPredicted RBP13.85□□□□□ -0.19
CDX2-201ENST00000381020 NR2F2P24468 414 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 KLHL30Q0D2K2 578 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 SLC9C1Q4G0N8 1177 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 ZMYND15Q9H091 742 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 MAGEF1Q9HAY2 307 aa13.85□□□□□ -0.19
CDX2-201ENST00000381020 MFAP3LO75121 409 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms