RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 MARCH6O60337 910 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 TPM3P06753 285 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 CYP3A4P08684 503 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 VCAM1P19320 739 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 SPP2Q13103 211 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 SEMA3FQ13275 785 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 SLFN12Q8IYM2 578 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 ZNF280CQ8ND82 737 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 ENOX1Q8TC92 643 aaKnown RBP24.19■■□□□ 1.46
GMDS-202ENST00000380815 LRRC15Q8TF66 581 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 PLIN2Q99541 437 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 SSC5DA1L4H1 1573 aa24.18■■□□□ 1.46
GMDS-202ENST00000380815 SMCHD1A6NHR9 2005 aa24.18■■□□□ 1.46
GMDS-202ENST00000380815 TBX3O15119 743 aa24.18■■□□□ 1.46
GMDS-202ENST00000380815 SPC24Q8NBT2 197 aa24.18■■□□□ 1.46
GMDS-202ENST00000380815 ZNF536O15090 1300 aa24.17■■□□□ 1.46
GMDS-202ENST00000380815 POTEMA6NI47 508 aa24.17■■□□□ 1.46
GMDS-202ENST00000380815 CFBP00751 764 aa24.17■■□□□ 1.46
GMDS-202ENST00000380815 RPN1P04843 607 aaKnown RBP24.17■■□□□ 1.46
GMDS-202ENST00000380815 C9orf131Q5VYM1 1079 aa24.17■■□□□ 1.46
GMDS-202ENST00000380815 KRT79Q5XKE5 535 aa24.17■■□□□ 1.46
GMDS-202ENST00000380815 SAMD1Q6SPF0 538 aaPredicted RBP24.17■■□□□ 1.46
GMDS-202ENST00000380815 TANGO6Q9C0B7 1094 aa24.17■■□□□ 1.46
GMDS-202ENST00000380815 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.17■■□□□ 1.46
GMDS-202ENST00000380815 STK17AQ9UEE5 414 aa24.17■■□□□ 1.46
GMDS-202ENST00000380815 FMR1Q06787 632 aaKnown RBP eCLIP24.16■■□□□ 1.463e-12■■■■■ 43.2
GMDS-202ENST00000380815 GRB10Q13322 594 aa24.16■■□□□ 1.46
GMDS-202ENST00000380815 NOL9Q5SY16 702 aaKnown RBP24.16■■□□□ 1.46
GMDS-202ENST00000380815 DRC7Q8IY82 874 aa24.16■■□□□ 1.46
GMDS-202ENST00000380815 RRAGDQ9NQL2 400 aaPredicted RBP24.16■■□□□ 1.46
GMDS-202ENST00000380815 CCPG1Q9ULG6 757 aa24.16■■□□□ 1.46
GMDS-202ENST00000380815 MSNP26038 577 aaKnown RBP24.16■■□□□ 1.46
GMDS-202ENST00000380815 DGKZQ13574 1117 aa24.16■■□□□ 1.46
GMDS-202ENST00000380815 PRR16Q569H4 304 aa24.16■■□□□ 1.46
GMDS-202ENST00000380815 FCHSD1Q86WN1 690 aa24.16■■□□□ 1.46
GMDS-202ENST00000380815 ETNPPLQ8TBG4 499 aa24.16■■□□□ 1.46
GMDS-202ENST00000380815 LENG9Q96B70 501 aa24.16■■□□□ 1.46
GMDS-202ENST00000380815 SLC38A10Q9HBR0 1119 aa24.16■■□□□ 1.46
GMDS-202ENST00000380815 PPP1R9AQ9ULJ8 1098 aa24.16■■□□□ 1.46
GMDS-202ENST00000380815 FAM86B1E9PN63 330 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 SLC26A4O43511 780 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 FLOT1O75955 427 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 FAM86B2P0C5J1 330 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 AMPD3Q01432 767 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 KCNB1Q14721 858 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 ZNF658Q5TYW1 1059 aaPredicted RBP24.15■■□□□ 1.46
GMDS-202ENST00000380815 SNX29Q8TEQ0 813 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 TBC1D5Q92609 795 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 CDK5RAP3Q96JB5 506 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 C12orf42Q96LP6 360 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 AGBL1Q96MI9 1066 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 PNMA5Q96PV4 448 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 RPAP3Q9H6T3 665 aaPredicted RBP24.15■■□□□ 1.46
GMDS-202ENST00000380815 FANCLQ9NW38 375 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 PNMA2Q9UL42 364 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 FZD1Q9UP38 647 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 ZHX2Q9Y6X8 837 aa24.15■■□□□ 1.46
GMDS-202ENST00000380815 PPP1R3GB7ZBB8 358 aa24.14■■□□□ 1.46
GMDS-202ENST00000380815 C19orf81C9J6K1 198 aa24.14■■□□□ 1.46
GMDS-202ENST00000380815 FDX1P10109 184 aa24.14■■□□□ 1.46
GMDS-202ENST00000380815 C7orf25Q9BPX7 421 aa24.14■■□□□ 1.46
GMDS-202ENST00000380815 EHMT1Q9H9B1 1298 aa24.14■■□□□ 1.46
GMDS-202ENST00000380815 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.14■■□□□ 1.46
GMDS-202ENST00000380815 CD44P16070 742 aaKnown RBP24.14■■□□□ 1.45
GMDS-202ENST00000380815 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.14■■□□□ 1.457e-6■■■□□ 14.8
GMDS-202ENST00000380815 GJA10Q969M2 543 aa24.14■■□□□ 1.45
GMDS-202ENST00000380815 DCPSQ96C86 337 aaKnown RBP24.14■■□□□ 1.45
GMDS-202ENST00000380815 FAM20AQ96MK3 541 aa24.14■■□□□ 1.45
GMDS-202ENST00000380815 MED15Q96RN5 788 aa24.14■■□□□ 1.45
GMDS-202ENST00000380815 NFE2L3Q9Y4A8 694 aa24.14■■□□□ 1.45
GMDS-202ENST00000380815 ATP1A3P13637 1013 aa24.13■■□□□ 1.45
GMDS-202ENST00000380815 FANCCQ00597 558 aa24.13■■□□□ 1.45
GMDS-202ENST00000380815 TMEM119Q4V9L6 283 aa24.13■■□□□ 1.45
GMDS-202ENST00000380815 TRIM9Q9C026 710 aa24.13■■□□□ 1.45
GMDS-202ENST00000380815 BLOC1S4Q9NUP1 217 aa24.13■■□□□ 1.45
GMDS-202ENST00000380815 POLR2AP24928 1970 aaKnown RBP24.13■■□□□ 1.45
GMDS-202ENST00000380815 KLRC4O43908 158 aa24.12■■□□□ 1.45
GMDS-202ENST00000380815 HSD17B4P51659 736 aa24.12■■□□□ 1.45
GMDS-202ENST00000380815 GHRHRQ02643 423 aa24.12■■□□□ 1.45
GMDS-202ENST00000380815 HYIQ5T013 277 aa24.12■■□□□ 1.45
GMDS-202ENST00000380815 DPY19L2Q6NUT2 758 aa24.12■■□□□ 1.45
GMDS-202ENST00000380815 SV2BQ7L1I2 683 aa24.12■■□□□ 1.45
GMDS-202ENST00000380815 SULF1Q8IWU6 871 aa24.12■■□□□ 1.45
GMDS-202ENST00000380815 SMYD4Q8IYR2 804 aaPredicted RBP24.12■■□□□ 1.45
GMDS-202ENST00000380815 NUDT12Q9BQG2 462 aa24.12■■□□□ 1.45
GMDS-202ENST00000380815 IFNKQ9P0W0 207 aa24.12■■□□□ 1.45
GMDS-202ENST00000380815 KDM3AQ9Y4C1 1321 aa24.12■■□□□ 1.45
GMDS-202ENST00000380815 USP2O75604 605 aaPredicted RBP24.11■■□□□ 1.45
GMDS-202ENST00000380815 RHOBTB3O94955 611 aa24.11■■□□□ 1.45
GMDS-202ENST00000380815 ZNF18P17022 549 aa24.11■■□□□ 1.45
GMDS-202ENST00000380815 ZNF76P36508 570 aa24.11■■□□□ 1.45
GMDS-202ENST00000380815 MCF2L2Q86YR7 1114 aa24.11■■□□□ 1.45
GMDS-202ENST00000380815 LARP4BQ92615 738 aaKnown RBP24.11■■□□□ 1.45
GMDS-202ENST00000380815 L3MBTL3Q96JM7 780 aaPredicted RBP24.11■■□□□ 1.45
GMDS-202ENST00000380815 XPO4Q9C0E2 1151 aaKnown RBP24.11■■□□□ 1.45
GMDS-202ENST00000380815 PHIPQ8WWQ0 1821 aa24.11■■□□□ 1.45
GMDS-202ENST00000380815 ZBED4O75132 1171 aa24.11■■□□□ 1.45
GMDS-202ENST00000380815 KMT5BQ4FZB7 885 aa24.11■■□□□ 1.45
GMDS-202ENST00000380815 SPATA1Q5VX52 437 aa24.11■■□□□ 1.45
GMDS-202ENST00000380815 TRMT44Q8IYL2 757 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms