RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 OTOP1Q7RTM1 612 aa21.52■■□□□ 1.04
SMN2-202ENST00000380742 TNFRSF25Q93038 417 aa21.52■■□□□ 1.04
SMN2-202ENST00000380742 AP3B2Q13367 1082 aa21.51■■□□□ 1.03
SMN2-202ENST00000380742 SAFBQ15424 915 aaKnown RBP eCLIP21.51■■□□□ 1.03
SMN2-202ENST00000380742 RMDN3Q96TC7 470 aa21.51■■□□□ 1.03
SMN2-202ENST00000380742 BRMS1Q9HCU9 246 aa21.51■■□□□ 1.03
SMN2-202ENST00000380742 DIS3Q9Y2L1 958 aaKnown RBP21.51■■□□□ 1.03
SMN2-202ENST00000380742 TRIM17Q9Y577 477 aa21.51■■□□□ 1.03
SMN2-202ENST00000380742 FRMPD4Q14CM0 1322 aa21.5■■□□□ 1.03
SMN2-202ENST00000380742 RPTORQ8N122 1335 aa21.5■■□□□ 1.03
SMN2-202ENST00000380742 VPS37CA5D8V6 355 aaPredicted RBP21.5■■□□□ 1.03
SMN2-202ENST00000380742 SPDYE3A6NKU9 549 aa21.5■■□□□ 1.03
SMN2-202ENST00000380742 FOSP01100 380 aaPredicted RBP21.5■■□□□ 1.03
SMN2-202ENST00000380742 ALDH5A1P51649 535 aaPredicted RBP21.5■■□□□ 1.03
SMN2-202ENST00000380742 EARS2Q5JPH6 523 aaKnown RBP21.5■■□□□ 1.03
SMN2-202ENST00000380742 DNERQ8NFT8 737 aa21.5■■□□□ 1.03
SMN2-202ENST00000380742 MAML3Q96JK9 1138 aa21.5■■□□□ 1.03
SMN2-202ENST00000380742 APBA2Q99767 749 aa21.5■■□□□ 1.03
SMN2-202ENST00000380742 ANO3Q9BYT9 981 aa21.5■■□□□ 1.03
SMN2-202ENST00000380742 PXMP2Q9NR77 195 aa21.5■■□□□ 1.03
SMN2-202ENST00000380742 SLC5A4Q9NY91 659 aa21.5■■□□□ 1.03
SMN2-202ENST00000380742 DAXXQ9UER7 740 aaPredicted RBP21.5■■□□□ 1.03
SMN2-202ENST00000380742 DDX49Q9Y6V7 483 aaKnown RBP21.5■■□□□ 1.03
SMN2-202ENST00000380742 KIAA1217Q5T5P2 1943 aa21.5■■□□□ 1.03
SMN2-202ENST00000380742 KIF28PB7ZC32 967 aa21.49■■□□□ 1.03
SMN2-202ENST00000380742 STX6O43752 255 aa21.49■■□□□ 1.03
SMN2-202ENST00000380742 EIF2AK2P19525 551 aaKnown RBP21.49■■□□□ 1.03
SMN2-202ENST00000380742 UBXN2AP68543 259 aa21.49■■□□□ 1.03
SMN2-202ENST00000380742 CCL14Q16627 93 aa21.49■■□□□ 1.03
SMN2-202ENST00000380742 NSUN6Q8TEA1 469 aaKnown RBP21.49■■□□□ 1.03
SMN2-202ENST00000380742 IPO9Q96P70 1041 aaKnown RBP21.49■■□□□ 1.03
SMN2-202ENST00000380742 FLRT1Q9NZU1 646 aa21.49■■□□□ 1.03
SMN2-202ENST00000380742 ADD3Q9UEY8 706 aaKnown RBP21.49■■□□□ 1.03
SMN2-202ENST00000380742 MTMR6Q9Y217 621 aa21.49■■□□□ 1.03
SMN2-202ENST00000380742 MYH15Q9Y2K3 1946 aa21.49■■□□□ 1.03
SMN2-202ENST00000380742 FAM205CA6NFA0 338 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 XRCC5P13010 732 aaKnown RBP21.48■■□□□ 1.03
SMN2-202ENST00000380742 IRF5Q13568 498 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 ARHGEF16Q5VV41 709 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 MCTP2Q6DN12 878 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 ZNF467Q7Z7K2 595 aaPredicted RBP21.48■■□□□ 1.03
SMN2-202ENST00000380742 IL31RAQ8NI17 732 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 PDCD2LQ9BRP1 358 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 FOXP1Q9H334 677 aaPredicted RBP21.48■■□□□ 1.03
SMN2-202ENST00000380742 HTTP42858 3142 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 U2AF2P26368 475 aaKnown RBP eCLIP21.48■■□□□ 1.034e-10■■■□□ 18.5
SMN2-202ENST00000380742 DDIT3P35638 169 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 PRMT2P55345 433 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 PKP1Q13835 747 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 PGM5Q15124 567 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 MCTP1Q6DN14 999 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 KRT25Q7Z3Z0 450 aa21.48■■□□□ 1.03
SMN2-202ENST00000380742 CCDC194A0A1B0GVG4 234 aa21.47■■□□□ 1.03
SMN2-202ENST00000380742 IGHA2P01877 340 aa21.47■■□□□ 1.03
SMN2-202ENST00000380742 EDNRBP24530 442 aa21.47■■□□□ 1.03
SMN2-202ENST00000380742 SREBF1P36956 1147 aa21.47■■□□□ 1.03
SMN2-202ENST00000380742 MAMDC4Q6UXC1 1216 aa21.47■■□□□ 1.03
SMN2-202ENST00000380742 PIK3AP1Q6ZUJ8 805 aa21.47■■□□□ 1.03
SMN2-202ENST00000380742 CRYGNQ8WXF5 182 aa21.47■■□□□ 1.03
SMN2-202ENST00000380742 IWS1Q96ST2 819 aa21.47■■□□□ 1.03
SMN2-202ENST00000380742 EDIL3O43854 480 aa21.46■■□□□ 1.03
SMN2-202ENST00000380742 NR3C2P08235 984 aa21.46■■□□□ 1.03
SMN2-202ENST00000380742 GNL2Q13823 731 aaKnown RBP21.46■■□□□ 1.03
SMN2-202ENST00000380742 NONOQ15233 471 aaKnown RBP eCLIP21.46■■□□□ 1.03
SMN2-202ENST00000380742 OLFML2BQ68BL8 750 aa21.46■■□□□ 1.03
SMN2-202ENST00000380742 NOSTRINQ8IVI9 506 aa21.46■■□□□ 1.03
SMN2-202ENST00000380742 RAET1EQ8TD07 263 aa21.46■■□□□ 1.03
SMN2-202ENST00000380742 MORC4Q8TE76 937 aa21.46■■□□□ 1.03
SMN2-202ENST00000380742 TBCKQ8TEA7 893 aa21.46■■□□□ 1.03
SMN2-202ENST00000380742 TRIB2Q92519 343 aa21.46■■□□□ 1.03
SMN2-202ENST00000380742 TINF2Q9BSI4 451 aa21.46■■□□□ 1.03
SMN2-202ENST00000380742 EHMT1Q9H9B1 1298 aa21.46■■□□□ 1.03
SMN2-202ENST00000380742 PTPN22Q9Y2R2 807 aa21.46■■□□□ 1.03
SMN2-202ENST00000380742 PTCH2Q9Y6C5 1203 aa21.46■■□□□ 1.03
SMN2-202ENST00000380742 LOC102724159A0A0B4J2E5 919 aa21.45■■□□□ 1.02
SMN2-202ENST00000380742 ASB14A6NK59 587 aa21.45■■□□□ 1.02
SMN2-202ENST00000380742 MYCLP12524 364 aaPredicted RBP21.45■■□□□ 1.02
SMN2-202ENST00000380742 ELNP15502 786 aa21.45■■□□□ 1.02
SMN2-202ENST00000380742 MRPS9P82933 396 aaKnown RBP21.45■■□□□ 1.02
SMN2-202ENST00000380742 ARHGAP4P98171 946 aa21.45■■□□□ 1.02
SMN2-202ENST00000380742 PWP2Q15269 919 aaKnown RBP21.45■■□□□ 1.02
SMN2-202ENST00000380742 INF2Q27J81 1249 aa21.45■■□□□ 1.02
SMN2-202ENST00000380742 ARMCX2Q7L311 632 aa21.45■■□□□ 1.02
SMN2-202ENST00000380742 CTU1Q7Z7A3 348 aaKnown RBP21.45■■□□□ 1.02
SMN2-202ENST00000380742 FERMT3Q86UX7 667 aa21.45■■□□□ 1.02
SMN2-202ENST00000380742 VSIG10LQ86VR7 867 aa21.45■■□□□ 1.02
SMN2-202ENST00000380742 ZFP91Q96JP5 570 aaPredicted RBP21.45■■□□□ 1.02
SMN2-202ENST00000380742 ADCY3O60266 1144 aa21.44■■□□□ 1.02
SMN2-202ENST00000380742 SNAI1O95863 264 aaPredicted RBP21.44■■□□□ 1.02
SMN2-202ENST00000380742 CENPFP49454 3210 aa21.44■■□□□ 1.02
SMN2-202ENST00000380742 PCNX4Q63HM2 1172 aa21.44■■□□□ 1.02
SMN2-202ENST00000380742 MSL3Q8N5Y2 521 aaKnown RBP21.44■■□□□ 1.02
SMN2-202ENST00000380742 PRDM10Q9NQV6 1147 aa21.44■■□□□ 1.02
SMN2-202ENST00000380742 SYNGAP1Q96PV0 1343 aa21.43■■□□□ 1.02
SMN2-202ENST00000380742 ZSCAN22P10073 491 aaPredicted RBP21.43■■□□□ 1.02
SMN2-202ENST00000380742 PDIA4P13667 645 aaKnown RBP21.43■■□□□ 1.02
SMN2-202ENST00000380742 CCND2P30279 289 aa21.43■■□□□ 1.02
SMN2-202ENST00000380742 CYP2C19P33261 490 aa21.43■■□□□ 1.02
SMN2-202ENST00000380742 PDE4DQ08499 809 aa21.43■■□□□ 1.02
SMN2-202ENST00000380742 RESTQ13127 1097 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms