RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 HOXD11P31277 338 aaPredicted RBP9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 EFCAB2Q5VUJ9 269 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 UBLCP1Q8WVY7 318 aaPredicted RBP9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 CLIP3Q96DZ5 547 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 GPATCH3Q96I76 525 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 NUDCD1Q96RS6 583 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 RAB17Q9H0T7 212 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 PFDN4Q9NQP4 134 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 KCNH3Q9ULD8 1083 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 A0A0D9SFI3 127 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 SPATA31D3P0C874 917 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 NFKBIAP25963 317 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 PDE6CP51160 858 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 PSMD7P51665 324 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 HDAC4P56524 1084 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 COPS2P61201 443 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 KRT83P78385 493 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 KIF5AQ12840 1032 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 MAP7Q14244 749 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 CCDC6Q16204 474 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 KRT71Q3SY84 523 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 SMUG1Q53HV7 270 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 NFRKBQ6P4R8 1299 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 SHC4Q6S5L8 630 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 SPATA31D4Q6ZUB0 917 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 GRAMD1CQ8IYS0 662 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 LRRC34Q8IZ02 419 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 CLASRPQ8N2M8 674 aaKnown RBP9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 RUBCNQ92622 972 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 PTPRN2Q92932 1015 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 EVI5LQ96CN4 794 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 LACRTQ9GZZ8 138 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 ECHDC1Q9NTX5 307 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 RBM12Q9NTZ6 932 aaKnown RBP9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 CTTNBP2NLQ9P2B4 639 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 SUCLA2Q9P2R7 463 aaPredicted RBP9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 ADD3Q9UEY8 706 aaKnown RBP9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 SNX12Q9UMY4 172 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 ARHGAP5Q13017 1502 aa9.32□□□□□ -0.92
NHLRC3-201ENST00000379599 ITIH6Q6UXX5 1313 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 DCDC2CA8MYV0 355 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 ZPR1O75312 459 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 IFNAR2P48551 515 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 HERVK_113P62684 666 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 RNASELQ05823 741 aaKnown RBP9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 ITIH4Q14624 930 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 DIXDC1Q155Q3 683 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 THOC7Q6I9Y2 204 aaKnown RBP9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 C3orf67Q6ZVT6 689 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 SCUBE1Q8IWY4 988 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 RETREG2Q8NC44 543 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 NEK9Q8TD19 979 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 CTAGE1Q96RT6 745 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 DDX50Q9BQ39 737 aaKnown RBP9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 RNPEPL1Q9HAU8 725 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 HMG20BQ9P0W2 317 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 AKR1B10O60218 316 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 MMEP08473 750 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 UBTFL6P0CB48 400 aaPredicted RBP9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 TROVE2P10155 538 aaKnown RBP eCLIP9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 PYGMP11217 842 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 ACADSP16219 412 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 BIRC3Q13489 604 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 TMEM132EQ6IEE7 984 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 AGBL1Q96MI9 1066 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 FAM192AQ9GZU8 254 aa9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 LUC7L2Q9Y383 392 aaKnown RBP9.31□□□□□ -0.92
NHLRC3-201ENST00000379599 ANO9A1A5B4 782 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 ATP9AO75110 1047 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 CHGBP05060 677 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 ZCCHC18P0CG32 403 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 GNAZP19086 355 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 IGHMBP2P38935 993 aaKnown RBP9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 PTDSS1P48651 473 aaKnown RBP9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 CEBPAP49715 358 aaPredicted RBP9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 IGBP1P78318 339 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 CYP27A1Q02318 531 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 DMPKQ09013 629 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 TRADDQ15628 312 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 CFAP157Q5JU67 520 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 STAG2Q8N3U4 1231 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 TMCO5AQ8N6Q1 288 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 IFT43Q96FT9 208 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 MED15Q96RN5 788 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 AFF2P51816 1311 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 NVLO15381 856 aaKnown RBP9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 PRC1O43663 620 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 BAG3O95817 575 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 SKIP12755 728 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 HSD17B3P37058 310 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 RNASE9P60153 205 aaKnown RBP9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 PKN1Q16512 942 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 MYOCDQ8IZQ8 938 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 ZMAT2Q96NC0 199 aaKnown RBP9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 PNMA3Q9UL41 463 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 BOLA2-SMG1P6H3BVE0 249 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 HIP1O00291 1037 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 FYB1O15117 783 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 TACC1O75410 805 aa9.3□□□□□ -0.92
NHLRC3-201ENST00000379599 ITGA2BP08514 1039 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms