RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 PHKBQ93100 1093 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 WNK4Q96J92 1243 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 ST7Q9NRC1 585 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 DLC1Q96QB1 1528 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 ARHGEF37A1IGU5 675 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 RPS6KB1P23443 525 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 ADCYAP1R1P41586 468 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 GPS2Q13227 327 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 IER5Q5VY09 327 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 OTOP2Q7RTS6 562 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 SLAIN1Q8ND83 568 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 ARNTL2Q8WYA1 636 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 CEP170P1Q96L14 293 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 FERMT1Q9BQL6 677 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 ZNF577Q9BSK1 485 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 NCOA5Q9HCD5 579 aaKnown RBP7.26□□□□□ -1.25
NEDD9-202ENST00000379446 ZSWIM6Q9HCJ5 1215 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 HELLSQ9NRZ9 838 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 DDX19AQ9NUU7 478 aaKnown RBP7.26□□□□□ -1.25
NEDD9-202ENST00000379446 CFAP45Q9UL16 551 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 SUGT1Q9Y2Z0 365 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 PCDHB7Q9Y5E2 793 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 PRRG1O14668 218 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 HERVK_113P62684 666 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 PIK3AP1Q6ZUJ8 805 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 FSIP1Q8NA03 581 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 NEK11Q8NG66 645 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 TTC14Q96N46 770 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 EXOC1Q9NV70 894 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 PCDHB12Q9Y5F1 795 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 SALL3Q9BXA9 1300 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 TNS2Q63HR2 1409 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 RPAP1Q9BWH6 1393 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-202ENST00000379446 PGK1P00558 417 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 GH1P01241 217 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 CHGBP05060 677 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 POTEIP0CG38 1075 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 AKR1A1P14550 325 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 TNNI1P19237 187 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 KRT2P35908 639 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 LIG4P49917 911 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 VEPH1Q14D04 833 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 ELF2Q15723 593 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 CDC37Q16543 378 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-202ENST00000379446 DTHD1Q6ZMT9 781 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 SCFD2Q8WU76 684 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 IRAK4Q9NWZ3 460 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 BCCIPQ9P287 314 aaKnown RBP eCLIP7.26□□□□□ -1.25
NEDD9-202ENST00000379446 MAP10Q9P2G4 905 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 RSPH14Q9UHP6 348 aa7.26□□□□□ -1.25
NEDD9-202ENST00000379446 FOSL2P15408 326 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 GTF2A1P52655 376 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 PPFIA1Q13136 1202 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 CEP135Q66GS9 1140 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 CEP68Q76N32 757 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 GOLGA6L1Q8N7Z2 621 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 NAT10Q9H0A0 1025 aaKnown RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 CBX8Q9HC52 389 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 EXOC7Q9UPT5 735 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 USP31Q70CQ4 1352 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 RPS6KA5O75582 802 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 HMGCRP04035 888 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 PPATQ06203 517 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 BAATQ14032 418 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 SLFNL1Q499Z3 407 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 WDR44Q5JSH3 913 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 GLB1LQ6UWU2 654 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 LEO1Q8WVC0 666 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 SECISBP2LQ93073 1101 aaKnown RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 PAWRQ96IZ0 340 aaKnown RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 ISCA1Q9BUE6 129 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 MCOLN1Q9GZU1 580 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 VPS33BQ9H267 617 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 ZSWIM4Q9H7M6 989 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 LUC7LQ9NQ29 371 aaKnown RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 KCNQ5Q9NR82 932 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 PRG3Q9Y2Y8 225 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 TAF6LQ9Y6J9 622 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 TNKSO95271 1327 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 H7C1W4 665 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 FGFR1OPO95684 399 aaKnown RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 GGPS1O95749 300 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 FOSP01100 380 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 FDX1P10109 184 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 CYP2D6P10635 497 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 ANXA13P27216 316 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 MTIF2P46199 727 aaKnown RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 HHIPL2Q6UWX4 724 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 C4orf50Q6ZRC1 276 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 HAUS6Q7Z4H7 955 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 SCN4BQ8IWT1 228 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 LCORLQ8N3X6 602 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 MYCT1Q8N699 235 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 ZNF296Q8WUU4 475 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 LPAR1Q92633 364 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 ALS2CR12Q96Q35 445 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 OSBPL5Q9H0X9 879 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-202ENST00000379446 SLC8A2Q9UPR5 921 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 DNM3Q9UQ16 869 aa7.25□□□□□ -1.25
NEDD9-202ENST00000379446 CAPN9O14815 690 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms