RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 MLXIPQ9HAP2 919 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 POTEMA6NI47 508 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 ADAM9Q13443 819 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 CACTINQ8WUQ7 758 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 ZNF215Q9UL58 517 aaPredicted RBP15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 XRN1Q8IZH2 1706 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 POLRMTO00411 1230 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 RGL2O15211 777 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 XRCC5P13010 732 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 COPB1P53618 953 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 ODR4Q5SWX8 454 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 ZNF658Q5TYW1 1059 aaPredicted RBP15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 PAF1Q8N7H5 531 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 SPZ1Q9BXG8 430 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 WDR11Q9BZH6 1224 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 ZHX2Q9Y6X8 837 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 POTEB2H3BUK9 544 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 ZBTB22O15209 634 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 RASA3Q14644 834 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 FAM102BQ5T8I3 360 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 TUBGCP2Q9BSJ2 902 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 PP2D1A8MPX8 630 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 NFIAQ12857 509 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 VWA3BQ502W6 1294 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 RGS22Q8NE09 1264 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 SYNCQ9H7C4 482 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 PCDHA6Q9UN73 950 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 SCAF8Q9UPN6 1271 aaKnown RBP15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 PCDHA8Q9Y5H6 950 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 BAZ2BQ9UIF8 2168 aaKnown RBP15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 MED1Q15648 1581 aaPredicted RBP15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 ZNF543Q08ER8 600 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 SLC16A10Q8TF71 515 aa15.69■□□□□ 0.1
SHROOM1-203ENST00000378679 CEP112Q8N8E3 955 aa15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 P2RX5Q93086 422 aa15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 GDAQ9Y2T3 454 aa15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 AKAP12Q02952 1782 aa15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 DMTNQ08495 405 aa15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 KLHL30Q0D2K2 578 aa15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 DHTKD1Q96HY7 919 aaPredicted RBP15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 PHF20Q9BVI0 1012 aa15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 ARHGAP4P98171 946 aa15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 CUL4BQ13620 913 aa15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 RSBN1LQ6PCB5 846 aaPredicted RBP15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 DPH6Q7L8W6 267 aa15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 LMBR1Q8WVP7 490 aa15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 CNOT6LQ96LI5 555 aaKnown RBP15.68■□□□□ 0.1
SHROOM1-203ENST00000378679 PSMD14O00487 310 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 FOXN1O15353 648 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 TDP2O95551 362 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 GNA14O95837 355 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 MYL1P05976 194 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 CTNNA2P26232 953 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 AP3B2Q13367 1082 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 ASIC2Q16515 512 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 TYW1BQ6NUM6 668 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 ARFGAP3Q9NP61 516 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 NDUFB10O96000 172 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 GOLGA8FQ08AF8 430 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 GOLGA8DPQ0D2H9 430 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 KMT5BQ4FZB7 885 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 WDR44Q5JSH3 913 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 TMEM110-MUSTN1A8MSY1 372 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 K7ENM7 598 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 ENTPD3O75355 529 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 PLA2G4BP0C869 781 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 JAKMIP2Q96AA8 810 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 IWS1Q96ST2 819 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 BHMT2Q9H2M3 363 aa15.67■□□□□ 0.1
SHROOM1-203ENST00000378679 PDHBP11177 359 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 KRT5P13647 590 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 TNFAIP3P21580 790 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 ATP2C1P98194 919 aaPredicted RBP15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 USP49Q70CQ1 688 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 POTEDQ86YR6 584 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 GOLGA1Q92805 767 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 CCDC51Q96ER9 411 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 SELENOOQ9BVL4 669 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 CNOT7Q9UIV1 285 aaKnown RBP15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 GSTTP1A0A1W2PQM5 241 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 FKBP3Q00688 224 aaKnown RBP15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 KCTD2Q14681 263 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 ERCC6LQ2NKX8 1250 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 SUGCTQ9HAC7 445 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 SERPINA10Q9UK55 444 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 CASP14P31944 242 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 PPARDQ03181 441 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 PLVAPQ9BX97 442 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 RTFDC1Q9BY42 306 aaPredicted RBP15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 AGXT2Q9BYV1 514 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 RAVER2Q9HCJ3 691 aaKnown RBP15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 RSPH14Q9UHP6 348 aa15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 FBXO2Q9UK22 296 aaPredicted RBP15.66■□□□□ 0.1
SHROOM1-203ENST00000378679 PLSCR1O15162 318 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 NR2F2P24468 414 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 CCNE1P24864 410 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 ARHGAP44Q17R89 818 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 FMNL3Q8IVF7 1028 aa15.65■□□□□ 0.1
SHROOM1-203ENST00000378679 MICALL2Q8IY33 904 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms