RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 PURBQ96QR8 312 aaKnown RBP20.26■□□□□ 0.83
TDP2-202ENST00000378198 TSGA10Q9BZW7 698 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 LRRC27Q9C0I9 530 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 SLC39A2Q9NP94 309 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 ADAM21Q9UKJ8 722 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 HNRNPH3P31942 346 aaKnown RBP20.26■□□□□ 0.83
TDP2-202ENST00000378198 ADCY7P51828 1080 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 CASP8Q14790 479 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 VWA3BQ502W6 1294 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 MFSD14BQ5SR56 506 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 LARP4BQ92615 738 aaKnown RBP20.26■□□□□ 0.83
TDP2-202ENST00000378198 EEF2KMTQ96G04 330 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 PNMA5Q96PV4 448 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 ACBD3Q9H3P7 528 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 HDAC6Q9UBN7 1215 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 TFR2Q9UP52 801 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 VAV2P52735 878 aa20.25■□□□□ 0.83
TDP2-202ENST00000378198 RBM17Q96I25 401 aaKnown RBP20.25■□□□□ 0.83
TDP2-202ENST00000378198 C8orf37Q96NL8 207 aa20.25■□□□□ 0.83
TDP2-202ENST00000378198 THSD7AQ9UPZ6 1657 aa20.25■□□□□ 0.83
TDP2-202ENST00000378198 MYMKA6NI61 221 aa20.25■□□□□ 0.83
TDP2-202ENST00000378198 KIF5AQ12840 1032 aa20.25■□□□□ 0.83
TDP2-202ENST00000378198 SPA17Q15506 151 aa20.25■□□□□ 0.83
TDP2-202ENST00000378198 CRY2Q49AN0 593 aa20.25■□□□□ 0.83
TDP2-202ENST00000378198 GUF1Q8N442 669 aaKnown RBP20.25■□□□□ 0.83
TDP2-202ENST00000378198 CCDC42Q96M95 316 aa20.25■□□□□ 0.83
TDP2-202ENST00000378198 MMS19Q96T76 1030 aa20.25■□□□□ 0.83
TDP2-202ENST00000378198 LACRTQ9GZZ8 138 aa20.25■□□□□ 0.83
TDP2-202ENST00000378198 PLAGL2Q9UPG8 496 aa20.25■□□□□ 0.83
TDP2-202ENST00000378198 RCCD1A6NED2 376 aa20.24■□□□□ 0.83
TDP2-202ENST00000378198 PSMD2Q13200 908 aa20.24■□□□□ 0.83
TDP2-202ENST00000378198 MAN2A1Q16706 1144 aa20.24■□□□□ 0.83
TDP2-202ENST00000378198 HPS3Q969F9 1004 aa20.24■□□□□ 0.83
TDP2-202ENST00000378198 SUGCTQ9HAC7 445 aa20.24■□□□□ 0.83
TDP2-202ENST00000378198 MTMR4Q9NYA4 1195 aa20.24■□□□□ 0.83
TDP2-202ENST00000378198 PODXL2Q9NZ53 605 aa20.24■□□□□ 0.83
TDP2-202ENST00000378198 FRMPD2Q68DX3 1309 aaPredicted RBP20.24■□□□□ 0.83
TDP2-202ENST00000378198 TARSL2A2RTX5 802 aaKnown RBP20.23■□□□□ 0.83
TDP2-202ENST00000378198 LRRC63Q05C16 580 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 FAM196AQ6ZSG2 479 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 CCDC84Q86UT8 332 aaPredicted RBP20.23■□□□□ 0.83
TDP2-202ENST00000378198 NEK11Q8NG66 645 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 RAD54LQ92698 747 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 COA7Q96BR5 231 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 NDST4Q9H3R1 872 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 USO1O60763 962 aaKnown RBP20.23■□□□□ 0.83
TDP2-202ENST00000378198 SNHG28P0DPA3 235 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 ADRA2BP18089 450 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 HNRNPH2P55795 449 aaKnown RBP20.23■□□□□ 0.83
TDP2-202ENST00000378198 MAP9Q49MG5 647 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 KRT79Q5XKE5 535 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 PPP1R18Q6NYC8 613 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 FOXR2Q6PJQ5 311 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 SECISBP2LQ93073 1101 aaKnown RBP20.23■□□□□ 0.83
TDP2-202ENST00000378198 SIK3Q9Y2K2 1263 aa20.23■□□□□ 0.83
TDP2-202ENST00000378198 SLC37A4O43826 429 aa20.22■□□□□ 0.83
TDP2-202ENST00000378198 SRGAP2O75044 1071 aa20.22■□□□□ 0.83
TDP2-202ENST00000378198 BBOX1O75936 387 aa20.22■□□□□ 0.83
TDP2-202ENST00000378198 VIPAS39Q9H9C1 493 aa20.22■□□□□ 0.83
TDP2-202ENST00000378198 TDP2O95551 362 aa20.22■□□□□ 0.83
TDP2-202ENST00000378198 CYP27A1Q02318 531 aa20.22■□□□□ 0.83
TDP2-202ENST00000378198 DYMQ7RTS9 669 aa20.22■□□□□ 0.83
TDP2-202ENST00000378198 FAM71BQ8TC56 605 aa20.22■□□□□ 0.83
TDP2-202ENST00000378198 SNX29Q8TEQ0 813 aa20.22■□□□□ 0.83
TDP2-202ENST00000378198 RIC8AQ9NPQ8 531 aa20.22■□□□□ 0.83
TDP2-202ENST00000378198 VPS18Q9P253 973 aa20.22■□□□□ 0.83
TDP2-202ENST00000378198 MYH7BA7E2Y1 1941 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 IGKV6D-41A0A0C4DH26 115 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 EDIL3O43854 480 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 IDEP14735 1019 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 GABPAQ06546 454 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 TMEM119Q4V9L6 283 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 HSP90B2PQ58FF3 399 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 PPP4R3AQ6IN85 833 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 IQCEQ6IPM2 695 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 FNBP4Q8N3X1 1017 aaPredicted RBP20.21■□□□□ 0.83
TDP2-202ENST00000378198 TRIM58Q8NG06 486 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 TBC1D16Q8TBP0 767 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 CAPZA3Q96KX2 299 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 DAGLAQ9Y4D2 1042 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 MYH4Q9Y623 1939 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 UBR3Q6ZT12 1888 aa20.21■□□□□ 0.83
TDP2-202ENST00000378198 C10orf71Q711Q0 1435 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 PNMA6FA0A0J9YX94 578 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 LCA5LO95447 670 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 GYS2P54840 703 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 EHHADHQ08426 723 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 TSG101Q99816 390 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 MED4Q9NPJ6 270 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 POTEMA6NI47 508 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 ZNF263O14978 683 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 NKRFO15226 690 aaKnown RBP eCLIP20.2■□□□□ 0.82
TDP2-202ENST00000378198 TACC1O75410 805 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 SEPT2Q15019 361 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 MUM1L1Q5H9M0 696 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 CAGE1Q8TC20 777 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 EDEM3Q9BZQ6 932 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 ARHGAP20Q9P2F6 1191 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 POLLQ9UGP5 575 aa20.2■□□□□ 0.82
TDP2-202ENST00000378198 JRKLQ9Y4A0 524 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms