RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 GRM4Q14833 912 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 IQCEQ6IPM2 695 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 CCDC70Q6NSX1 233 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 MTMR8Q96EF0 704 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 LOC102724428A0A0B4J2F2 783 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 A0A1W2PQJ5 194 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 SIK1P57059 783 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 CDK17Q00537 523 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 CCDC181Q5TID7 509 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 FAM114A1Q8IWE2 563 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 C7orf25Q9BPX7 421 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 VAT1LQ9HCJ6 419 aa19.99■□□□□ 0.79
GNE-201ENST00000377902 KRT14P02533 472 aa19.98■□□□□ 0.79
GNE-201ENST00000377902 PPARDQ03181 441 aa19.98■□□□□ 0.79
GNE-201ENST00000377902 PPFIA1Q13136 1202 aa19.98■□□□□ 0.79
GNE-201ENST00000377902 TADA2BQ86TJ2 420 aa19.98■□□□□ 0.79
GNE-201ENST00000377902 MKNK2Q9HBH9 465 aa19.98■□□□□ 0.79
GNE-201ENST00000377902 XIRP1Q702N8 1843 aaKnown RBP19.98■□□□□ 0.79
GNE-201ENST00000377902 MYH14Q7Z406 1995 aaKnown RBP19.98■□□□□ 0.79
GNE-201ENST00000377902 TXKP42681 527 aa19.98■□□□□ 0.79
GNE-201ENST00000377902 ATP1A2P50993 1020 aa19.98■□□□□ 0.79
GNE-201ENST00000377902 LRRC41Q15345 812 aa19.98■□□□□ 0.79
GNE-201ENST00000377902 EFCAB13Q8IY85 973 aa19.98■□□□□ 0.79
GNE-201ENST00000377902 TLR10Q9BXR5 811 aa19.98■□□□□ 0.79
GNE-201ENST00000377902 FAM153BP0C7A2 387 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 SLC1A4P43007 532 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 MAGEA1P43355 309 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 NAPAP54920 295 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 NAP1L1P55209 391 aaKnown RBP19.97■□□□□ 0.79
GNE-201ENST00000377902 RNASE9P60153 205 aaKnown RBP19.97■□□□□ 0.79
GNE-201ENST00000377902 APBA1Q02410 837 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 FAM153CQ494X1 144 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 SBK1Q52WX2 424 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 FIGNQ5HY92 759 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 ICE2Q659A1 982 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 DGKHQ86XP1 1220 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 POTEDQ86YR6 584 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 KAT2BQ92831 832 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 STIM2Q9P246 746 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 FAM153AQ9UHL3 310 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 FAM169AQ9Y6X4 670 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 MYMKA6NI61 221 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 GLI1P08151 1106 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 TSPY3P0CV98 308 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 TSPY8P0CW00 308 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 HIBADHP31937 336 aaKnown RBP19.97■□□□□ 0.79
GNE-201ENST00000377902 PDCLQ13371 301 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 C12orf60Q5U649 245 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 SH3GL2Q99962 352 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 TMEM260Q9NX78 707 aa19.97■□□□□ 0.79
GNE-201ENST00000377902 EIF3HO15372 352 aaKnown RBP eCLIP19.96■□□□□ 0.79
GNE-201ENST00000377902 HNRNPH3P31942 346 aaKnown RBP19.96■□□□□ 0.79
GNE-201ENST00000377902 TRADDQ15628 312 aa19.96■□□□□ 0.79
GNE-201ENST00000377902 CENPPQ6IPU0 288 aa19.96■□□□□ 0.79
GNE-201ENST00000377902 SH3RF3Q8TEJ3 882 aaPredicted RBP19.96■□□□□ 0.79
GNE-201ENST00000377902 CCDC47Q96A33 483 aaKnown RBP19.96■□□□□ 0.79
GNE-201ENST00000377902 ZIM3Q96PE6 472 aa19.96■□□□□ 0.79
GNE-201ENST00000377902 TMEM47Q9BQJ4 181 aa19.96■□□□□ 0.79
GNE-201ENST00000377902 NLRC4Q9NPP4 1024 aa19.96■□□□□ 0.79
GNE-201ENST00000377902 BIN2Q9UBW5 565 aaPredicted RBP19.96■□□□□ 0.79
GNE-201ENST00000377902 SAP30BPQ9UHR5 308 aaKnown RBP19.96■□□□□ 0.79
GNE-201ENST00000377902 HYOU1Q9Y4L1 999 aa19.96■□□□□ 0.79
GNE-201ENST00000377902 PRPHP41219 470 aa19.96■□□□□ 0.79
GNE-201ENST00000377902 CARSP49589 748 aaKnown RBP19.96■□□□□ 0.79
GNE-201ENST00000377902 KLHDC7AQ5VTJ3 777 aa19.96■□□□□ 0.79
GNE-201ENST00000377902 TMED8Q6PL24 325 aaPredicted RBP19.96■□□□□ 0.79
GNE-201ENST00000377902 KANSL2Q9H9L4 492 aa19.96■□□□□ 0.79
GNE-201ENST00000377902 MYH1P12882 1939 aa19.96■□□□□ 0.79
GNE-201ENST00000377902 SMCO2A6NFE2 343 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 KLRF2D3W0D1 207 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 EBAG9O00559 213 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 GTF2A1P52655 376 aaPredicted RBP19.95■□□□□ 0.78
GNE-201ENST00000377902 CNNM4Q6P4Q7 775 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 USP17L2Q6R6M4 530 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 ZNF572Q7Z3I7 529 aaPredicted RBP19.95■□□□□ 0.78
GNE-201ENST00000377902 DAGLBQ8NCG7 672 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 BAP1Q92560 729 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 PACSIN2Q9UNF0 486 aaPredicted RBP19.95■□□□□ 0.78
GNE-201ENST00000377902 DIXDC1Q155Q3 683 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 GRIK5Q16478 980 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 C8orf74Q6P047 294 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 DZIP1Q86YF9 867 aaKnown RBP19.95■□□□□ 0.78
GNE-201ENST00000377902 TBCKQ8TEA7 893 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 IFT81Q8WYA0 676 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 BLOC1S4Q9NUP1 217 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 NFU1Q9UMS0 254 aa19.95■□□□□ 0.78
GNE-201ENST00000377902 A0A087WUV0 522 aaPredicted RBP19.94■□□□□ 0.78
GNE-201ENST00000377902 LAD1O00515 517 aa19.94■□□□□ 0.78
GNE-201ENST00000377902 TCP1P17987 556 aaKnown RBP19.94■□□□□ 0.78
GNE-201ENST00000377902 EPHB4P54760 987 aa19.94■□□□□ 0.78
GNE-201ENST00000377902 GRB10Q13322 594 aa19.94■□□□□ 0.78
GNE-201ENST00000377902 ALS2CR12Q96Q35 445 aa19.94■□□□□ 0.78
GNE-201ENST00000377902 NUDT12Q9BQG2 462 aa19.94■□□□□ 0.78
GNE-201ENST00000377902 CUEDC2Q9H467 287 aa19.94■□□□□ 0.78
GNE-201ENST00000377902 KIAA1551Q9HCM1 1747 aa19.94■□□□□ 0.78
GNE-201ENST00000377902 PALM3A6NDB9 673 aaPredicted RBP19.94■□□□□ 0.78
GNE-201ENST00000377902 GOLGA8KD6RF30 607 aa19.94■□□□□ 0.78
GNE-201ENST00000377902 PRLRP16471 622 aa19.94■□□□□ 0.78
GNE-201ENST00000377902 NONOQ15233 471 aaKnown RBP eCLIP19.94■□□□□ 0.78
GNE-201ENST00000377902 ENOX2Q16206 610 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms