RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 TTC38Q5R3I4 469 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 FANCBQ8NB91 859 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 C3orf20Q8ND61 904 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 LPIN2Q92539 896 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 PLCB1Q9NQ66 1216 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 RBM28Q9NW13 759 aaKnown RBP17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 DISP2A7MBM2 1401 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 MYH13Q9UKX3 1938 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 ANKRD33BA6NCL7 494 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 SNRPA1P09661 255 aaKnown RBP17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 KRT2P35908 639 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 PPP1R7Q15435 360 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 NPY5RQ15761 445 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 TNFRSF25Q93038 417 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 ZNF570Q96NI8 536 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 ALS2CR12Q96Q35 445 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 STRBPQ96SI9 672 aaKnown RBP17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 CWC25Q9NXE8 425 aaPredicted RBP17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 ADAMTS3O15072 1205 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 RAD51CO43502 376 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 DRD4P21917 467 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 CFAP221Q4G0U5 840 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 MSL1Q68DK7 614 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 WHAMMQ8TF30 809 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.31■□□□□ 0.367e-8■■■□□ 15.2
CSNK1A1-202ENST00000377843 RMND1Q9NWS8 449 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 MYH10P35580 1976 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 ENO4A6NNW6 628 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 GCOM1H8Y6P7 765 aaPredicted RBP17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 CLSTN1O94985 981 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 MYZAPP0CAP1 466 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 WTAPQ15007 396 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 ARFGAP2Q8N6H7 521 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 RETREG2Q8NC44 543 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 MAGEC2Q9UBF1 373 aaPredicted RBP17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 TRPC6Q9Y210 931 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 C15orf41Q9Y2V0 281 aa17.31■□□□□ 0.36
CSNK1A1-202ENST00000377843 ANP32DO95626 131 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 TOM1L2Q6ZVM7 507 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 ZNF654Q8IZM8 581 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 PROCA1Q8NCQ7 364 aaPredicted RBP17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 MICAL1Q8TDZ2 1067 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 TCP11Q8WWU5 503 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 KDM4CQ9H3R0 1056 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 PLAGL2Q9UPG8 496 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 ATRNO75882 1429 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 NBPF26B4DH59 902 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 KLRC4O43908 158 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 AP1G2O75843 785 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 PDE6AP16499 860 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 ERVK-9P63128 1117 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 ADCY2Q08462 1091 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 NBPF9Q3BBW0 867 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 NBPF10Q6P3W6 841 aaKnown RBP17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 IFNL3Q8IZI9 196 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 NBPF15Q8N660 670 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 ZBTB10Q96DT7 871 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 NEUROG2Q9H2A3 272 aa17.3■□□□□ 0.36
CSNK1A1-202ENST00000377843 TCRBV5S4A2TA0A5A2 114 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 LCA5LO95447 670 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 PAEPP09466 180 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 GHRP10912 638 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 RASSF7Q02833 373 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 AKNAD1Q5T1N1 836 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 DDX42Q86XP3 938 aaKnown RBP eCLIP17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 CSGALNACT2Q8N6G5 542 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 CNOT6LQ96LI5 555 aaKnown RBP17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 TAF1DQ9H5J8 278 aaPredicted RBP17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 SPATS2LQ9NUQ6 558 aaKnown RBP17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 PACSIN2Q9UNF0 486 aaPredicted RBP17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 GOLGA6L10A6NI86 522 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 FTCDO95954 541 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 HNRNPH3P31942 346 aaKnown RBP17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 PPP2R2AP63151 447 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 GFPT1Q06210 699 aaPredicted RBP17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 NAALADL2Q58DX5 795 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 GKAP1Q5VSY0 366 aaPredicted RBP17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 LRIG3Q6UXM1 1119 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 MDM1Q8TC05 714 aa17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 NOVA2Q9UNW9 492 aaKnown RBP17.29■□□□□ 0.36
CSNK1A1-202ENST00000377843 MEGF6O75095 1541 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 ADAMTS7Q9UKP4 1686 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 A0A1W2PQJ5 194 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 SMNDC1O75940 238 aaKnown RBP eCLIP17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 CLTAP09496 248 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 MYBP10242 640 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 FLT3P36888 993 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 SLC1A4P43007 532 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 MAGEA1P43355 309 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 ICA1Q05084 483 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 HLFQ16534 295 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 KLHL7Q8IXQ5 586 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 AGAP11Q8TF27 550 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 CALR3Q96L12 384 aaKnown RBP17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 NDST4Q9H3R1 872 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 PANK4Q9NVE7 773 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 SLC4A4Q9Y6R1 1079 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 PRKAB2O43741 272 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 ORC4O43929 436 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms