RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SPZ1Q9BXG8 430 aa19.5■□□□□ 0.71
HMGN4-201ENST00000377575 UBE2OQ9C0C9 1292 aaKnown RBP19.5■□□□□ 0.71
HMGN4-201ENST00000377575 GPHNQ9NQX3 736 aaPredicted RBP19.5■□□□□ 0.71
HMGN4-201ENST00000377575 PDLIM7Q9NR12 457 aa19.5■□□□□ 0.71
HMGN4-201ENST00000377575 SLC12A7Q9Y666 1083 aa19.5■□□□□ 0.71
HMGN4-201ENST00000377575 CABYRO75952 493 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 HSD17B4P51659 736 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 IRX5P78411 483 aaPredicted RBP19.49■□□□□ 0.71
HMGN4-201ENST00000377575 BEX3Q00994 111 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 GHRHRQ02643 423 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 TLE2Q04725 743 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 SLC35G1Q2M3R5 365 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 TSGA10IPQ3SY00 556 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 ARHGEF16Q5VV41 709 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 ANKRD33Q7Z3H0 272 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 TBC1D5Q92609 795 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 TOX2Q96NM4 488 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 TAAR1Q96RJ0 339 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 PPP4R2Q9NY27 417 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 COL20A1Q9P218 1284 aa19.49■□□□□ 0.71
HMGN4-201ENST00000377575 SEC63Q9UGP8 760 aaKnown RBP19.49■□□□□ 0.71
HMGN4-201ENST00000377575 DCDC2CA8MYV0 355 aa19.48■□□□□ 0.71
HMGN4-201ENST00000377575 OPLAHO14841 1288 aa19.48■□□□□ 0.71
HMGN4-201ENST00000377575 REC8O95072 547 aa19.48■□□□□ 0.71
HMGN4-201ENST00000377575 SMARCA1P28370 1054 aa19.48■□□□□ 0.71
HMGN4-201ENST00000377575 TTLL4Q14679 1199 aa19.48■□□□□ 0.71
HMGN4-201ENST00000377575 SGMS1Q86VZ5 419 aa19.48■□□□□ 0.71
HMGN4-201ENST00000377575 TDHQ8IZJ6 230 aa19.48■□□□□ 0.71
HMGN4-201ENST00000377575 RRP36Q96EU6 259 aaKnown RBP19.48■□□□□ 0.71
HMGN4-201ENST00000377575 LRRC2Q9BYS8 371 aa19.48■□□□□ 0.71
HMGN4-201ENST00000377575 HMGB1P09429 215 aaKnown RBP19.47■□□□□ 0.71
HMGN4-201ENST00000377575 CPT1AP50416 773 aa19.47■□□□□ 0.71
HMGN4-201ENST00000377575 COL9A3Q14050 684 aaPredicted RBP19.47■□□□□ 0.71
HMGN4-201ENST00000377575 STXBP2Q15833 593 aa19.47■□□□□ 0.71
HMGN4-201ENST00000377575 BRDTQ58F21 947 aaPredicted RBP19.47■□□□□ 0.71
HMGN4-201ENST00000377575 SYNE3Q6ZMZ3 975 aa19.47■□□□□ 0.71
HMGN4-201ENST00000377575 OR6J1Q8NGC5 347 aa19.47■□□□□ 0.71
HMGN4-201ENST00000377575 PXMP2Q9NR77 195 aa19.47■□□□□ 0.71
HMGN4-201ENST00000377575 LAMA3Q16787 3333 aa19.46■□□□□ 0.71
HMGN4-201ENST00000377575 GCOM1H8Y6P7 765 aaPredicted RBP19.46■□□□□ 0.71
HMGN4-201ENST00000377575 ARVCFO00192 962 aa19.46■□□□□ 0.71
HMGN4-201ENST00000377575 POLR2MP0CAP2 368 aa19.46■□□□□ 0.71
HMGN4-201ENST00000377575 EIF2AK2P19525 551 aaKnown RBP19.46■□□□□ 0.71
HMGN4-201ENST00000377575 PTGS1P23219 599 aa19.46■□□□□ 0.71
HMGN4-201ENST00000377575 CXCL17Q6UXB2 119 aa19.46■□□□□ 0.71
HMGN4-201ENST00000377575 DHX32Q7L7V1 743 aaKnown RBP19.46■□□□□ 0.71
HMGN4-201ENST00000377575 MICU3Q86XE3 530 aa19.46■□□□□ 0.71
HMGN4-201ENST00000377575 RASEFQ8IZ41 740 aa19.46■□□□□ 0.71
HMGN4-201ENST00000377575 PIBF1Q8WXW3 757 aa19.46■□□□□ 0.71
HMGN4-201ENST00000377575 SEZ6LQ9BYH1 1024 aa19.46■□□□□ 0.71
HMGN4-201ENST00000377575 POLR3EQ9NVU0 708 aa19.46■□□□□ 0.71
HMGN4-201ENST00000377575 TLR3O15455 904 aaKnown RBP19.45■□□□□ 0.7
HMGN4-201ENST00000377575 PLEKHA8P1O95397 391 aa19.45■□□□□ 0.7
HMGN4-201ENST00000377575 TXNP10599 105 aaKnown RBP19.45■□□□□ 0.7
HMGN4-201ENST00000377575 RXRAP19793 462 aa19.45■□□□□ 0.7
HMGN4-201ENST00000377575 ADCK5Q3MIX3 580 aa19.45■□□□□ 0.7
HMGN4-201ENST00000377575 TMEM63BQ5T3F8 832 aa19.45■□□□□ 0.7
HMGN4-201ENST00000377575 SH3RF1Q7Z6J0 888 aa19.45■□□□□ 0.7
HMGN4-201ENST00000377575 TMEM39AQ9NV64 488 aa19.45■□□□□ 0.7
HMGN4-201ENST00000377575 PCDH10Q9P2E7 1040 aa19.45■□□□□ 0.7
HMGN4-201ENST00000377575 TRIM43BA6NCK2 446 aa19.44■□□□□ 0.7
HMGN4-201ENST00000377575 KIAA0355O15063 1070 aa19.44■□□□□ 0.7
HMGN4-201ENST00000377575 HOXA13P31271 388 aaPredicted RBP19.44■□□□□ 0.7
HMGN4-201ENST00000377575 CDK7P50613 346 aa19.44■□□□□ 0.7
HMGN4-201ENST00000377575 EXOSC10Q01780 885 aaKnown RBP19.44■□□□□ 0.7
HMGN4-201ENST00000377575 FAAP100Q0VG06 881 aa19.44■□□□□ 0.7
HMGN4-201ENST00000377575 SEPT14Q6ZU15 432 aa19.44■□□□□ 0.7
HMGN4-201ENST00000377575 FANCBQ8NB91 859 aa19.44■□□□□ 0.7
HMGN4-201ENST00000377575 TRIM43Q96BQ3 446 aaPredicted RBP19.44■□□□□ 0.7
HMGN4-201ENST00000377575 RBM28Q9NW13 759 aaKnown RBP19.44■□□□□ 0.7
HMGN4-201ENST00000377575 MYH7BA7E2Y1 1941 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 SCN10AQ9Y5Y9 1956 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 EIF3JO75822 258 aaKnown RBP19.43■□□□□ 0.7
HMGN4-201ENST00000377575 NR3C2P08235 984 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 RAG1P15918 1043 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 HSPA4P34932 840 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 FGD1P98174 961 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 APOA5Q6Q788 366 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 TMTC3Q6ZXV5 915 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 RAB11FIP4Q86YS3 637 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 SRBD1Q8N5C6 995 aaKnown RBP19.43■□□□□ 0.7
HMGN4-201ENST00000377575 BADQ92934 168 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 KCNB2Q92953 911 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 TCEANC2Q96MN5 208 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 PDCD2LQ9BRP1 358 aa19.43■□□□□ 0.7
HMGN4-201ENST00000377575 EPB41L2O43491 1005 aaKnown RBP19.42■□□□□ 0.7
HMGN4-201ENST00000377575 ARIH2O95376 493 aa19.42■□□□□ 0.7
HMGN4-201ENST00000377575 MYL3P08590 195 aa19.42■□□□□ 0.7
HMGN4-201ENST00000377575 ITGA7Q13683 1181 aa19.42■□□□□ 0.7
HMGN4-201ENST00000377575 PGM5Q15124 567 aa19.42■□□□□ 0.7
HMGN4-201ENST00000377575 FAM126BQ8IXS8 530 aa19.42■□□□□ 0.7
HMGN4-201ENST00000377575 CUL5Q93034 780 aa19.42■□□□□ 0.7
HMGN4-201ENST00000377575 ZBTB43O43298 467 aa19.41■□□□□ 0.7
HMGN4-201ENST00000377575 KPNA6O60684 536 aa19.41■□□□□ 0.7
HMGN4-201ENST00000377575 GH1P01241 217 aa19.41■□□□□ 0.7
HMGN4-201ENST00000377575 MYCLP12524 364 aaPredicted RBP19.41■□□□□ 0.7
HMGN4-201ENST00000377575 CCND2P30279 289 aa19.41■□□□□ 0.7
HMGN4-201ENST00000377575 PURAQ00577 322 aaKnown RBP19.41■□□□□ 0.7
HMGN4-201ENST00000377575 LRIT3Q3SXY7 679 aa19.41■□□□□ 0.7
HMGN4-201ENST00000377575 CCDC62Q6P9F0 684 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms