RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	SMARCE1	Q969G3	411 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	TMEM60	Q9H2L4	133 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	STAT6	P42226	847 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	CALCRL	Q16602	461 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	METTL16	Q86W50	562 aa	Known RBP	13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	CREBRF	Q8IUR6	639 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	SPC24	Q8NBT2	197 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	PP2D1	A8MPX8	630 aa		13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	TBC1D12	O60347	775 aa		13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	CLSTN1	O94985	981 aa		13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	TDP2	O95551	362 aa		13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	OR52Z1	P0C646	297 aa		13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	TMEM266	Q2M3C6	531 aa		13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	SUPT20HL1	Q3ZLR7	823 aa		13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	DAGLB	Q8NCG7	672 aa		13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	ZBED3	Q96IU2	234 aa	Predicted RBP	13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	RIC8A	Q9NPQ8	531 aa		13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	ADCY5	O95622	1261 aa		13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	KARS	Q15046	597 aa	Known RBP	13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	AOPEP	Q8N6M6	819 aa		13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	ANKRD7	Q92527	254 aa		13.13	□□□□□ -0.31
LMO7-204	ENST00000377499	TPM4	P67936	248 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	UBXN2A	P68543	259 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	POSTN	Q15063	836 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	KIAA1755	Q5JYT7	1200 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	IQUB	Q8NA54	791 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	ZNF408	Q9H9D4	720 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	DLEC1	Q9Y238	1755 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	CTNND1	O60716	968 aa	Known RBP	13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	CASP1	P29466	404 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	RRAGB	Q5VZM2	374 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	KLHL10	Q6JEL2	608 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	KANK3	Q6NY19	840 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	ILDR2	Q71H61	639 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	POTED	Q86YR6	584 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	PCDHA5	Q9Y5H7	936 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	SMC2	O95347	1197 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	DPCR1	Q3MIW9	517 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	KRT26	Q7Z3Y9	468 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	ZNF579	Q8NAF0	562 aa	Known RBP	13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	KIF18A	Q8NI77	898 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	C16orf45	Q96MC5	204 aa	Predicted RBP	13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	TEPSIN	Q96N21	525 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	BLZF1	Q9H2G9	400 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	DDX25	Q9UHL0	483 aa	Known RBP	13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	ECM29	Q5VYK3	1845 aa		13.12	□□□□□ -0.31
LMO7-204	ENST00000377499	SSB	P05455	408 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	ALAS1	P13196	640 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	GLT8D2	Q9H1C3	349 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	CCPG1	Q9ULG6	757 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	ESYT2	A0FGR8	921 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	ANKRD65	E5RJM6	399 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	PPP1R12B	O60237	982 aa	Predicted RBP	13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	HIRA	P54198	1017 aa	Predicted RBP	13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	PLS1	Q14651	629 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	HSP90AA4P	Q58FG1	418 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	PPP1R18	Q6NYC8	613 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	GJA10	Q969M2	543 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	FUCA2	Q9BTY2	467 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	RAB34	Q9BZG1	259 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	AS3MT	Q9HBK9	375 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	ADARB2	Q9NS39	739 aa	Known RBP	13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	HPSE	Q9Y251	543 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	ADM5	C9JUS6	153 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	LONP1	P36776	959 aa	Known RBP	13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	HMGCS2	P54868	508 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	TRAF1	Q13077	416 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	UVSSA	Q2YD98	709 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	ANO3	Q9BYT9	981 aa		13.11	□□□□□ -0.31
LMO7-204	ENST00000377499	SKIDA1	Q1XH10	827 aa		13.1	□□□□□ -0.31
LMO7-204	ENST00000377499	PRR16	Q569H4	304 aa		13.1	□□□□□ -0.31
LMO7-204	ENST00000377499	FAM160B2	Q86V87	743 aa		13.1	□□□□□ -0.31
LMO7-204	ENST00000377499	CALML4	Q96GE6	196 aa		13.1	□□□□□ -0.31
LMO7-204	ENST00000377499	LRWD1	Q9UFC0	647 aa		13.1	□□□□□ -0.31
LMO7-204	ENST00000377499	FEM1B	Q9UK73	627 aa		13.1	□□□□□ -0.31
LMO7-204	ENST00000377499	NF2	P35240	595 aa		13.1	□□□□□ -0.31
LMO7-204	ENST00000377499	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.1	□□□□□ -0.31
LMO7-204	ENST00000377499	RPAIN	Q86UA6	219 aa		13.1	□□□□□ -0.31
LMO7-204	ENST00000377499	CABP7	Q86V35	215 aa		13.1	□□□□□ -0.31
LMO7-204	ENST00000377499	TMOD4	Q9NZQ9	345 aa		13.1	□□□□□ -0.31
LMO7-204	ENST00000377499	CSAD	Q9Y600	493 aa		13.1	□□□□□ -0.31
LMO7-204	ENST00000377499	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	RAVER2	Q9HCJ3	691 aa	Known RBP	13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	MYH4	Q9Y623	1939 aa		13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	NLRP12	P59046	1061 aa		13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	TPD52L1	Q16890	204 aa	Predicted RBP	13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	SCYL3	Q8IZE3	742 aa		13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	SLF1	Q9BQI6	1058 aa		13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	PHF20L1	A8MW92	1017 aa		13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	POLR2M	P0CAP2	368 aa		13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	TTC31	Q49AM3	519 aa	Predicted RBP	13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	AGBL1	Q96MI9	1066 aa		13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	MRPL11	Q9Y3B7	192 aa	Known RBP	13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	FOCAD	Q5VW36	1801 aa		13.09	□□□□□ -0.31
LMO7-204	ENST00000377499	SLC37A4	O43826	429 aa		13.08	□□□□□ -0.31
LMO7-204	ENST00000377499	IBSP	P21815	317 aa	Predicted RBP	13.08	□□□□□ -0.31
LMO7-204	ENST00000377499	IL17A	Q16552	155 aa		13.08	□□□□□ -0.31
LMO7-204	ENST00000377499	NSMF	Q6X4W1	530 aa		13.08	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms