RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 MSRAQ9UJ68 235 aa22.46■■□□□ 1.19
CBWD3-204ENST00000377349 PNMA2Q9UL42 364 aa22.46■■□□□ 1.19
CBWD3-204ENST00000377349 TCF20Q9UGU0 1960 aaKnown RBP22.46■■□□□ 1.19
CBWD3-204ENST00000377349 BRWD1Q9NSI6 2320 aa22.45■■□□□ 1.18
CBWD3-204ENST00000377349 ARIH2O95376 493 aa22.45■■□□□ 1.18
CBWD3-204ENST00000377349 MYL3P08590 195 aa22.45■■□□□ 1.18
CBWD3-204ENST00000377349 PDE4AP27815 886 aa22.45■■□□□ 1.18
CBWD3-204ENST00000377349 RABGGTBP53611 331 aa22.45■■□□□ 1.18
CBWD3-204ENST00000377349 DNERQ8NFT8 737 aa22.45■■□□□ 1.18
CBWD3-204ENST00000377349 PPP1R13LQ8WUF5 828 aa22.45■■□□□ 1.18
CBWD3-204ENST00000377349 MTG1Q9BT17 334 aaPredicted RBP22.45■■□□□ 1.18
CBWD3-204ENST00000377349 RNF41Q9H4P4 317 aaPredicted RBP22.45■■□□□ 1.18
CBWD3-204ENST00000377349 A6NJR5 290 aa22.44■■□□□ 1.18
CBWD3-204ENST00000377349 PDE4DQ08499 809 aa22.44■■□□□ 1.18
CBWD3-204ENST00000377349 PPP2R5BQ15173 497 aa22.44■■□□□ 1.18
CBWD3-204ENST00000377349 NBPF20Q3BBV1 942 aa22.44■■□□□ 1.18
CBWD3-204ENST00000377349 TJAP1Q5JTD0 557 aa22.44■■□□□ 1.18
CBWD3-204ENST00000377349 GPATCH4Q5T3I0 446 aaKnown RBP22.44■■□□□ 1.18
CBWD3-204ENST00000377349 DGKHQ86XP1 1220 aa22.44■■□□□ 1.18
CBWD3-204ENST00000377349 UBA5Q9GZZ9 404 aa22.44■■□□□ 1.18
CBWD3-204ENST00000377349 NKRFO15226 690 aaKnown RBP eCLIP22.43■■□□□ 1.18
CBWD3-204ENST00000377349 MYOGP15173 224 aa22.43■■□□□ 1.18
CBWD3-204ENST00000377349 TTLL4Q14679 1199 aa22.43■■□□□ 1.18
CBWD3-204ENST00000377349 USH1GQ495M9 461 aa22.43■■□□□ 1.18
CBWD3-204ENST00000377349 RPUSD2Q8IZ73 545 aaKnown RBP22.43■■□□□ 1.18
CBWD3-204ENST00000377349 RGS22Q8NE09 1264 aa22.43■■□□□ 1.18
CBWD3-204ENST00000377349 SCFD2Q8WU76 684 aa22.43■■□□□ 1.18
CBWD3-204ENST00000377349 TBC1D5Q92609 795 aa22.43■■□□□ 1.18
CBWD3-204ENST00000377349 ESR2Q92731 530 aa22.43■■□□□ 1.18
CBWD3-204ENST00000377349 SUPT20HL2P0C7V6 817 aa22.42■■□□□ 1.18
CBWD3-204ENST00000377349 ANKS1AQ92625 1134 aa22.42■■□□□ 1.18
CBWD3-204ENST00000377349 SYMPKQ92797 1274 aaKnown RBP22.42■■□□□ 1.18
CBWD3-204ENST00000377349 COL20A1Q9P218 1284 aa22.42■■□□□ 1.18
CBWD3-204ENST00000377349 SLC4A7Q9Y6M7 1214 aa22.42■■□□□ 1.18
CBWD3-204ENST00000377349 TTC22Q5TAA0 569 aa22.41■■□□□ 1.18
CBWD3-204ENST00000377349 NFRKBQ6P4R8 1299 aa22.41■■□□□ 1.18
CBWD3-204ENST00000377349 CCDC62Q6P9F0 684 aa22.41■■□□□ 1.18
CBWD3-204ENST00000377349 PNMA1Q8ND90 353 aa22.41■■□□□ 1.18
CBWD3-204ENST00000377349 PPM1EQ8WY54 764 aa22.41■■□□□ 1.18
CBWD3-204ENST00000377349 SLC28A3Q9HAS3 691 aa22.41■■□□□ 1.18
CBWD3-204ENST00000377349 KDM4AO75164 1064 aa22.4■■□□□ 1.18
CBWD3-204ENST00000377349 PFKMP08237 780 aa22.4■■□□□ 1.18
CBWD3-204ENST00000377349 TXNP10599 105 aaKnown RBP22.4■■□□□ 1.18
CBWD3-204ENST00000377349 GSPT1P15170 499 aaKnown RBP22.4■■□□□ 1.18
CBWD3-204ENST00000377349 CDC37Q16543 378 aaPredicted RBP22.4■■□□□ 1.18
CBWD3-204ENST00000377349 IMMTQ16891 758 aaKnown RBP22.4■■□□□ 1.18
CBWD3-204ENST00000377349 PCDHA11Q9Y5I1 949 aa22.4■■□□□ 1.18
CBWD3-204ENST00000377349 B4E1Z4 1266 aa22.4■■□□□ 1.18
CBWD3-204ENST00000377349 DEFB128Q7Z7B8 93 aa22.4■■□□□ 1.18
CBWD3-204ENST00000377349 ADGRF4Q8IZF3 695 aa22.4■■□□□ 1.18
CBWD3-204ENST00000377349 ENAHQ8N8S7 591 aaPredicted RBP22.4■■□□□ 1.18
CBWD3-204ENST00000377349 CTAGE1Q96RT6 745 aa22.4■■□□□ 1.18
CBWD3-204ENST00000377349 GPHNQ9NQX3 736 aaPredicted RBP22.4■■□□□ 1.18
CBWD3-204ENST00000377349 RAD50Q92878 1312 aa22.39■■□□□ 1.18
CBWD3-204ENST00000377349 ZBBXA8MT70 800 aa22.39■■□□□ 1.17
CBWD3-204ENST00000377349 KPNA6O60684 536 aa22.39■■□□□ 1.17
CBWD3-204ENST00000377349 ATP2A2P16615 1042 aaKnown RBP22.39■■□□□ 1.17
CBWD3-204ENST00000377349 NT5C2P49902 561 aa22.39■■□□□ 1.17
CBWD3-204ENST00000377349 FAM47CQ5HY64 1035 aa22.39■■□□□ 1.17
CBWD3-204ENST00000377349 SYTL5Q8TDW5 730 aaPredicted RBP22.39■■□□□ 1.17
CBWD3-204ENST00000377349 TAAR1Q96RJ0 339 aa22.39■■□□□ 1.17
CBWD3-204ENST00000377349 MPHOSPH6Q99547 160 aaKnown RBP22.39■■□□□ 1.17
CBWD3-204ENST00000377349 MAF1Q9H063 256 aa22.39■■□□□ 1.17
CBWD3-204ENST00000377349 PITPNM1O00562 1244 aa22.38■■□□□ 1.17
CBWD3-204ENST00000377349 CCDC85BQ15834 202 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-204ENST00000377349 BRDTQ58F21 947 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-204ENST00000377349 IQCA1Q86XH1 822 aa22.38■■□□□ 1.17
CBWD3-204ENST00000377349 ATXN2LQ8WWM7 1075 aaKnown RBP22.38■■□□□ 1.17
CBWD3-204ENST00000377349 DSCC1Q9BVC3 393 aa22.38■■□□□ 1.17
CBWD3-204ENST00000377349 IL25Q9H293 177 aa22.38■■□□□ 1.17
CBWD3-204ENST00000377349 THEGQ9P2T0 379 aa22.38■■□□□ 1.17
CBWD3-204ENST00000377349 CTNNA3Q9UI47 895 aa22.38■■□□□ 1.17
CBWD3-204ENST00000377349 ABCB11O95342 1321 aa22.38■■□□□ 1.17
CBWD3-204ENST00000377349 IQCF3P0C7M6 154 aa22.37■■□□□ 1.17
CBWD3-204ENST00000377349 IGFBP4P22692 258 aa22.37■■□□□ 1.17
CBWD3-204ENST00000377349 PTPN11Q06124 597 aaPredicted RBP22.37■■□□□ 1.17
CBWD3-204ENST00000377349 ARHGAP1Q07960 439 aa22.37■■□□□ 1.17
CBWD3-204ENST00000377349 QRICH1Q2TAL8 776 aa22.37■■□□□ 1.17
CBWD3-204ENST00000377349 PPP2R2DQ66LE6 453 aa22.37■■□□□ 1.17
CBWD3-204ENST00000377349 ZSCAN10Q96SZ4 725 aaPredicted RBP22.37■■□□□ 1.17
CBWD3-204ENST00000377349 KAT14Q9H8E8 782 aa22.37■■□□□ 1.17
CBWD3-204ENST00000377349 ZSWIM5Q9P217 1185 aa22.37■■□□□ 1.17
CBWD3-204ENST00000377349 COL4A4P53420 1690 aaPredicted RBP22.37■■□□□ 1.17
CBWD3-204ENST00000377349 RFC2P35250 354 aa22.36■■□□□ 1.17
CBWD3-204ENST00000377349 LY6KQ17RY6 165 aa22.36■■□□□ 1.17
CBWD3-204ENST00000377349 ASPRV1Q53RT3 343 aa22.36■■□□□ 1.17
CBWD3-204ENST00000377349 CCDC178Q5BJE1 867 aa22.36■■□□□ 1.17
CBWD3-204ENST00000377349 AFG1LQ8WV93 481 aa22.36■■□□□ 1.17
CBWD3-204ENST00000377349 KAT2BQ92831 832 aa22.36■■□□□ 1.17
CBWD3-204ENST00000377349 ASB2Q96Q27 587 aa22.36■■□□□ 1.17
CBWD3-204ENST00000377349 JMJD4Q9H9V9 463 aa22.36■■□□□ 1.17
CBWD3-204ENST00000377349 DOCK5Q9H7D0 1870 aa22.35■■□□□ 1.17
CBWD3-204ENST00000377349 B4DLN1 442 aa22.35■■□□□ 1.17
CBWD3-204ENST00000377349 OPLAHO14841 1288 aa22.35■■□□□ 1.17
CBWD3-204ENST00000377349 MMP3P08254 477 aa22.35■■□□□ 1.17
CBWD3-204ENST00000377349 MRPL12P52815 198 aaKnown RBP22.35■■□□□ 1.17
CBWD3-204ENST00000377349 GPNMBQ14956 572 aa22.35■■□□□ 1.17
CBWD3-204ENST00000377349 DHX16O60231 1041 aaKnown RBP22.34■■□□□ 1.17
CBWD3-204ENST00000377349 ARHGEF15O94989 841 aa22.34■■□□□ 1.17
CBWD3-204ENST00000377349 CA3P07451 260 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms