RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 NALCNQ8IZF0 1738 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 ANKRD62A6NC57 917 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 ZEB2O60315 1214 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 PDHBP11177 359 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 RBM10P98175 930 aaKnown RBP9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 DMP1Q13316 513 aaPredicted RBP9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 LRRC41Q15345 812 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 CRY2Q49AN0 593 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 NEK11Q8NG66 645 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 CDCA5Q96FF9 252 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 FAM205AQ6ZU69 1335 aa9.4□□□□□ -0.91
CRNKL1-202ENST00000377340 CCP110O43303 1012 aa9.4□□□□□ -0.91
CRNKL1-202ENST00000377340 GCFC2P16383 781 aaKnown RBP9.4□□□□□ -0.91
CRNKL1-202ENST00000377340 HACE1Q8IYU2 909 aa9.4□□□□□ -0.91
CRNKL1-202ENST00000377340 NFAT5O94916 1531 aa9.4□□□□□ -0.91
CRNKL1-202ENST00000377340 PPM1FP49593 454 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 MYL5Q02045 173 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 HSP90AA2PQ14568 343 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 TTLL4Q14679 1199 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 SPDYE2Q495Y8 402 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 GRAMD1CQ8IYS0 662 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 RETREG2Q8NC44 543 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 EPSTI1Q96J88 318 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 ZNF830Q96NB3 372 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 PANK4Q9NVE7 773 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 PARP2Q9UGN5 583 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 NFE2L3Q9Y4A8 694 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 NRXN3Q9Y4C0 1643 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 CAVIN2O95810 425 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 VIL1P09327 827 aaKnown RBP9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 NDUFA8P51970 172 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 BACE1P56817 501 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 SREBF2Q12772 1141 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 CTAGE1Q96RT6 745 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 PIK3C2AO00443 1686 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 SMIM22K7EJ46 135 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 TDP2O95551 362 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 PGK2P07205 417 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 GTF2A2P52657 109 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 PAK1Q13153 545 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 SLC39A14Q15043 492 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 FAM26FQ5R3K3 315 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 SWSAP1Q6NVH7 229 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 BANK1Q8NDB2 785 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 IGDCC4Q8TDY8 1250 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 POMGNT1Q8WZA1 660 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 SPATA33Q96N06 139 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 NUB1Q9Y5A7 615 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 COL4A3BPQ9Y5P4 624 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
CRNKL1-202ENST00000377340 PALM3A6NDB9 673 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 ZBBXA8MT70 800 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 CYP2C8P10632 490 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 MCM6Q14566 821 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 SRRTQ9BXP5 876 aaKnown RBP9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 PXDNLA1KZ92 1463 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 hCG_1984214I3L0E3 225 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 IPO5O00410 1097 aaKnown RBP9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 PSAPP07602 524 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 CCDC172P0C7W6 258 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 RNASELQ05823 741 aaKnown RBP9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 LONRF3Q496Y0 759 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 ARMCX5Q6P1M9 558 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 TICAM2Q86XR7 235 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 ZNF713Q8N859 430 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 LARP4BQ92615 738 aaKnown RBP9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 NACC1Q96RE7 527 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 MMS19Q96T76 1030 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 CRACR2AQ9BSW2 395 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 TAB2Q9NYJ8 693 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 POLR1AO95602 1720 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 GLTPD2A6NH11 291 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 CALUO43852 315 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 TRAPPC10P48553 1259 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 MYOCDQ8IZQ8 938 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 ADGRB2O60241 1585 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 NWD1Q149M9 1564 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 ATRNO75882 1429 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 ABL1P00519 1130 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 IFRD2Q12894 506 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 ARHGAP44Q17R89 818 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 DLK2Q6UY11 383 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 USP50Q70EL3 339 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 CCDC186Q7Z3E2 898 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 SGMS1Q86VZ5 419 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 SMYD4Q8IYR2 804 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 VGLL2Q8N8G2 317 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 NELFBQ8WX92 580 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 RPS6KC1Q96S38 1066 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 RUFY1Q96T51 708 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 NUDT12Q9BQG2 462 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 BARHL2Q9NY43 387 aa9.38□□□□□ -0.91
CRNKL1-202ENST00000377340 TMEM110-MUSTN1A8MSY1 372 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 PRPF6O94906 941 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 NR3C2P08235 984 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 LONP1P36776 959 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 TNNT3P45378 269 aaPredicted RBP9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 ANTXR2P58335 489 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms